Contig 005690:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF024G05Sequence610009335 (2)ref|XP_009780102.1|8e-13PREDICTED: WD repeat domain-containing protein 83 isoform X2 [Nicotiana sylvest780005690 (2)ref|XP_008457747.1|9e-10PREDICTED: filament-like plant protein 7 [Cucumis melo] ref|XP_008457748.1| PRED
JMSF025G05Sequence179005128 (8)ref|WP_032234272.1|2e-25transcriptional regulator, partial [Escherichia coli]590005690 (2)ref|XP_008457747.1|3e-09PREDICTED: filament-like plant protein 7 [Cucumis melo] ref|XP_008457748.1| PRED

Alignment

This contig is upended


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rJMSF024G05+          CCCGATGATTATTCATGGCGGAAATATGGACATAAGCCCATCAAAGGATCCCCCACCCCC
                      ____________________________________________________________
consensus             CCCGATGATTATTCATGGCGGAAATATGGACATAAGCCCATCAAAGGATCCCCCACCCCC
 
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rJMSF024G05+          AAGGTTTTGATTTATCGAAATGAAGGTGAAAGGTGCTTGAAAGAAACATCTATTAATTCA
                      ____________________________________________________________
consensus             AAGGTTTTGATTTATCGAAATGAAGGTGAAAGGTGCTTGAAAGAAACATCTATTAATTCA
 
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rJMSF024G05+          CTGAGGATAAGCCTCAAGGCCCCAAGTACAGTGCAGGCAAATGCTGAATCAGATGCAAAG
                      ____________________________________________________________
consensus             CTGAGGATAAGCCTCAAGGCCCCAAGTACAGTGCAGGCAAATGCTGAATCAGATGCAAAG
 
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rJMSF025G05+              CTGAAGGGAAGGNAAATGTTTTTGGGAAAAATCAAAGGGAAGTTCTGGTGGCAAAG
rJMSF024G05+          GCATCTGAAGGGAAGGAAAATGTTTCTGGGAAAAATCAAAGGGAAGTTCTGGTGGCAAAG
                      ____________________________________________________________
consensus             GCATCTGAAGGGAAGGAAAATGTTTTTGGGAAAAATCAAAGGGAAGTTCTGGTGGCAAAG
 
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rJMSF025G05+          CCGAAAGCAAAAAAGCAGCTTCTATCTCAGGAAATGATGGTGCCACCCAAAGGGCTACTA
rJMSF024G05+          CCGAAAGCAAAAAAGCAGCTTCTATCTCAGGAAATGATGGTGCCACCCAAAGGGCTACTA
                      ____________________________________________________________
consensus             CCGAAAGCAAAAAAGCAGCTTCTATCTCAGGAAATGATGGTGCCACCCAAAGGGCTACTA
 
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rJMSF025G05+          GAACATGCTCTATTGTTGTTGAGGAATCGATGAGAAGCCTTGATGAGAAGTTAGCATCTG
rJMSF024G05+          GAACATGCTCTATTGTTGTTGAGGAATCGATGAGAAGCCTTGATGAGAAGTTAGCATCTG
                      ____________________________________________________________
consensus             GAACATGCTCTATTGTTGTTGAGGAATCGATGAGAAGCCTTGATGAGAAGTTAGCATCTG
 
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rJMSF025G05+          CTCTCGATGAGTGCAACGCTAAAGATGAATTAGTCACAAAGTTCNCAAAAATGGCGGAAG
rJMSF024G05+          CTCTCGATGAGTGCAACGCTAAAGATGAATTAGTCACAAAGTTCACAAAAATGGCGGAAG
                      ____________________________________________________________
consensus             CTCTCGATGAGTGCAACGCTAAAGATGAATTAGTCACAAAGTTCACAAAAATGGCGGAAG
 
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rJMSF025G05+          AAGCCATTGCAGCTCACAAGAAAGCGGAGGCTGAAATTATGTGTTTGAAGGAAGAGTTAG
rJMSF024G05+          AAGCCATTGCAGCTCACAAGAAAGCGGAGGCTGAAATTATGTGTTTGAAGGAAGAGTTAG
                      ____________________________________________________________
consensus             AAGCCATTGCAGCTCACAAGAAAGCGGAGGCTGAAATTATGTGTTTGAAGGAAGAGTTAG
 
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rJMSF025G05+          AAGAATGGAAGGCTAACTCACCTTACCAGTGCATTGAAGGATTGTATGCAGAAATGAAGG
rJMSF024G05+          AAGAATGGAAGGCTAACTCACCTTACCAGTGCATTGAAGGATTGTATGCAGAAATGAAGG
                      ____________________________________________________________
consensus             AAGAATGGAAGGCTAACTCACCTTACCAGTGCATTGAAGGATTGTATGCAGAAATGAAGG
 
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rJMSF025G05+          AAGAGCTGGCTATTTATGGACCTATATCAAATGATATCTCCTCCATATCAAGCCATGAAT
rJMSF024G05+          AAGAGCTGGCTATTTATGGACCTATATCAAATGATATCTCCTCCATATCAAGCCATGAAT
                      ____________________________________________________________
consensus             AAGAGCTGGCTATTTATGGACCTATATCAAATGATATCTCCTCCATATCAAGCCATGAAT
 
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rJMSF025G05+          CGAAGAAGGAACATCAAAGTGTTTCTACTGAAGCTTGGGCTTGTGCTTTGATATCTGAAC
rJMSF024G05+          CGAAGAAGGAACATCAAAGTGTTTCTACTGAAGCTTGGGCTTGTGCTTTGATATCTGAAC
                      ____________________________________________________________
consensus             CGAAGAAGGAACATCAAAGTGTTTCTACTGAAGCTTGGGCTTGTGCTTTGATATCTGAAC
 
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rJMSF025G05+          TAGAGCATTTCAAGAATCATAAGGACCAGAAGAGTAACTCTGAACAGAAAATGATTGGAG
rJMSF024G05+          TAGAGCATTTCAAGAATCATAAGGACCAGAAGAGTAACTCTGAACAGAAAATGATTGGAG
                      ____________________________________________________________
consensus             TAGAGCATTTCAAGAATCATAAGGACCAGAAGAGTAACTCTGAACAGAAAATGATTGGAG
 
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rJMSF025G05+          TTTCAGAGATGAGGCTAATGGATGATTTTGTCGAAATGGAAAAACTAGCAATAG      
rJMSF024G05+          TTTCAGAGATGAGGCTAATGGATGATTTTGTCGAAATGGAAAAACTAGCAATAGTAGCAA
                      ____________________________________________________________
consensus             TTTCAGAGATGAGGCTAATGGATGATTTTGTCGAAATGGAAAAACTAGCAATAGTAGCAA