Contig 005683:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF023B20-                   GGCATATATCCGGCTAAAGGACCAGAATAAAACAGGAATCAGCTCTCAGGGT
rJMSF023B20+                  GGCATATATCCGGCTAAAGGACCAGAATAAANCAGGAATCAGCTCTCAGGGT
                      ____________________________________________________________
consensus                     GGCATATATCCGGCTAAAGGACCAGAATAAAACAGGAATCAGCTCTCAGGGT
 
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JMSF023B20-           ATTGCTGAATCCTCAGATACTACTTCGTAACACGCTACCATTACCAGACTGCTCAATATG
rJMSF023B20+          ATTGCTGAATCCTCAGATACTACTTCGTAACACGCTACCATTACCAGACTGCTCAATATG
                      ____________________________________________________________
consensus             ATTGCTGAATCCTCAGATACTACTTCGTAACACGCTACCATTACCAGACTGCTCAATATG
 
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JMSF023B20-           CAAAGCTTGCGATCCTCTATTTTGAGTTATGTGAGAGTTAGAGTCTCTTTAAAAAACATG
rJMSF023B20+          CAAAGCTTGCGATCCTCTATTTTGAGTTATGTGAGAGTTAGAGTCTCTTTAAAAAACATG
                      ____________________________________________________________
consensus             CAAAGCTTGCGATCCTCTATTTTGAGTTATGTGAGAGTTAGAGTCTCTTTAAAAAACATG
 
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JMSF023B20-           GTTTGTCCTCAAACTCCGAGTTTGTTGAATCTGCTCAACCAACGATTCTGCACATCAAGT
rJMSF023B20+          GTTTGTCCTCAAACTCCGAGTTTGTTGAATCTGCTCAACCAACGATTCTGCACATCAAGT
                      ____________________________________________________________
consensus             GTTTGTCCTCAAACTCCGAGTTTGTTGAATCTGCTCAACCAACGATTCTGCACATCAAGT
 
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JMSF023B20-           GCTTCTACTGCTACCGGCCATGACCAGACAATGGAACGGGTGATTAATTTGGTAAAGAAA
rJMSF023B20+          GCTTCTACTGCTACCGGCCATGACCAGACAATGGAACGGGTGATTAATTTGGTAAAGAAA
                      ____________________________________________________________
consensus             GCTTCTACTGCTACCGGCCATGACCAGACAATGGAACGGGTGATTAATTTGGTAAAGAAA
 
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JMSF023B20-           TTTGACAAGATTGATGCAGCTAAGGTTACTGAAAGAGCTGATTTCCAGAAGGACTTGAGC
rJMSF023B20+          TTTGACAAGATTGATGCAGCTAAGGTTACTGAAAGAGCTGATTTCCAGAAGGACTTGAGC
                      ____________________________________________________________
consensus             TTTGACAAGATTGATGCAGCTAAGGTTACTGAAAGAGCTGATTTCCAGAAGGACTTGAGC
 
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JMSF023B20-           CTTGATAGCTTGGATCGAGTTGAACTCGTGATGGCTTTTGAGCAAGAGTTCTCCATAGAG
rJMSF023B20+          CTTGATAGCTTGGATCGAGTTGAACTCGTGATGGCTTTTGAGCAAGAGTTCTCCATAGAG
                      ____________________________________________________________
consensus             CTTGATAGCTTGGATCGAGTTGAACTCGTGATGGCTTTTGAGCAAGAGTTCTCCATAGAG
 
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JMSF023B20-           ATACCTGATGAGGAAGCAGACAAGCTTAAATGCTGTGCTGATGTCGCCAGGTACATTTCT
rJMSF023B20+          ATACCTGATGAGGAAGCAGACAAGCTTAAATGCTGTGCTGATGTCGCCAGGTACATTTCT
                      ____________________________________________________________
consensus             ATACCTGATGAGGAAGCAGACAAGCTTAAATGCTGTGCTGATGTCGCCAGGTACATTTCT
 
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JMSF023B20-           GTAGCTGATCGGAAAGTTTCTGAGAACTCGTGAAATATTATGTCAGCCATCAATCAAGTG
rJMSF023B20+          GTAGCTGATCGGAAAGTTTCTGAGAACTCGTGAAATATTATGTCAGCCATCAATCAAGTG
                      ____________________________________________________________
consensus             GTAGCTGATCGGAAAGTTTCTGAGAACTCGTGAAATATTATGTCAGCCATCAATCAAGTG
 
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JMSF023B20-           CTTTAGAATCTTTATATTTCCGTCTCAGAAGTAGGCTAGGCTATTGGAATGACAAATTGT
rJMSF023B20+          CTTTAGAATCTTTATATTTCCGTCTCAGAAGTAGGCTAGGCTATTGGAATGACAAATTGT
                      ____________________________________________________________
consensus             CTTTAGAATCTTTATATTTCCGTCTCAGAAGTAGGCTAGGCTATTGGAATGACAAATTGT
 
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JMSF023B20-           AGAACGATCGATGCTGATTTTCTCCATTCTTTTGATTCCTAAATTAGTGTTTAGATAGAT
rJMSF023B20+          AGAACGATCGATGCTGATTTTCTCCATTCTTTTGATTCCTAAATTAGTGTTTAGATAGAT
                      ____________________________________________________________
consensus             AGAACGATCGATGCTGATTTTCTCCATTCTTTTGATTCCTAAATTAGTGTTTAGATAGAT
 
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JMSF023B20-           ATGCATATGTTTTAGTGTTTTATTCTACATGTGACCATTAC                   
rJMSF023B20+          ATGCATATGTTTTAGTGTTTTATTCTACATGTGACCATTACTGTAATTTGTTAGAAAAAT
                      ____________________________________________________________
consensus             ATGCATATGTTTTAGTGTTTTATTCTACATGTGACCATTACTGTAATTTGTTAGAAAAAT
 
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rJMSF023B20+          GTGAATTGCTCTTTGAATGATGCTGGTACTTCTGTGCTTGGGTTAACCTTCCCAGAAGCT
                      ____________________________________________________________
consensus             GTGAATTGCTCTTTGAATGATGCTGGTACTTCTGTGCTTGGGTTAACCTTCCCAGAAGCT