| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFN030L02 | Sequence | 642 | 005676 (9) | ref|XP_009766326.1| | 4e-36 | PREDICTED: histone H1 [Nicotiana sylvestris] gb|AAD48472.1|AF170089_1 histone H1 | |||||
| JMFN044K09 | Sequence | 597 | 005676 (9) | ref|XP_009766326.1| | 1e-36 | PREDICTED: histone H1 [Nicotiana sylvestris] gb|AAD48472.1|AF170089_1 histone H1 | |||||
| JMSF021N18 | Sequence | 594 | 005676 (9) | ref|XP_009766326.1| | 3e-36 | PREDICTED: histone H1 [Nicotiana sylvestris] gb|AAD48472.1|AF170089_1 histone H1 | 640 | 005676 (9) | ref|XP_009766326.1| | 4e-36 | PREDICTED: histone H1 [Nicotiana sylvestris] gb|AAD48472.1|AF170089_1 histone H1 |
| JMSF041J21 | Sequence | 736 | 005676 (9) | ref|XP_009766326.1| | 9e-36 | PREDICTED: histone H1 [Nicotiana sylvestris] gb|AAD48472.1|AF170089_1 histone H1 | 674 | 005676 (9) | ref|XP_009766326.1| | 5e-36 | PREDICTED: histone H1 [Nicotiana sylvestris] gb|AAD48472.1|AF170089_1 histone H1 |
| JMSF043H06 | Sequence | 771 | 005676 (9) | ref|XP_009766326.1| | 1e-35 | PREDICTED: histone H1 [Nicotiana sylvestris] gb|AAD48472.1|AF170089_1 histone H1 | 714 | 005676 (9) | ref|XP_009766326.1| | 8e-36 | PREDICTED: histone H1 [Nicotiana sylvestris] gb|AAD48472.1|AF170089_1 histone H1 |
| JMSF045B11 | Sequence | 646 | 020094 | ref|XP_006340718.1| | 9e-32 | PREDICTED: histone H1-like [Solanum tuberosum] | 630 | 005676 (9) | gb|AAN37904.1| | 3e-32 | histone H1D [Nicotiana tabacum] |
This contig is upended
. : . : . : . : . : . :
rJMSF045B11- AGTTTGATTACATAATTTGCAGAAACAAAGATCTAAGATGTTATAATCCTACAAACATA
JMSF041J21+ AACATA
JMSF043H06+ TTTGCAGAAACAAAGATTTAAGATGTTATAATCCTACAAACATA
____________________________________________________________
consensus AGTTTGATTACATAATTTGCAGAAACAAAGATTTAAGATGTTATAATCCTACAAACATA
. : . : . : . : . : . :
rJMSF045B11- TACAGAAAAAGAGGACTTTTCTTACATTTAATAGGGAGGTAATTCACACAGTAGCTTTAT
JMSF041J21+ TACAGAAAAAGAGGACTTTTCTTACATTTAATAGGGAGGTAATTCACACAGTAGCTTTAT
JMFN030L02+ AT
rJMSF041J21- CACAGTAGCTTTAT
JMSF043H06+ TACAGAAAAAGAGGACTTTTCTTACATTTAATAGGGAGGTAATTCACACAGTAGCTTTAT
rJMSF043H06- AAAAGAGGACTTTTCTTACATTTAATAGGGAGGTAATTCACACAGTAGCTTTAT
____________________________________________________________
consensus TACAGAAAAAGAGGACTTTTCTTACATTTAATAGGGAGGTAATTCACACAGTAGCTTTAT
. : . : . : . : . : . :
rJMSF045B11- TCGTTTTAATTATGTATTTAAACTGTATATATACACAACTCTCATGCAGCAACGGCCTTC
JMSF041J21+ TCGTTTTAATTATGTATTTAAACTGTATATATACACAACTCTCATGCAGCAACGGCCTTC
JMFN044K09+ CATGCAGCAACGGCCTTC
JMFN030L02+ TCGTTTTAATTATGTATTTAAACTGTATATATACACAACTCTCATGCAGCAACGGCCTTC
rJMSF041J21- TCGTTTTAATTATGTATTTAAACTGTATATATACACAACTCTCATGCAGCAACGGCCTTC
JMSF043H06+ TCGTTTTAATTATGTATTTAAACTGTATATATACACAACTCTCATGCAGCAACGGCCTTC
rJMSF043H06- TCGTTTTAATTATGTATTTAAACTGTATATATACACAACTCTCATGCAGCAACGGCCTTC
rJMSF021N18- AACTGTATATATACACAACTCTCATGCAGCAACGGCCTTC
____________________________________________________________
consensus TCGTTTTAATTATGTATTTAAACTGTATATATACACAACTCTCATGCAGCAACGGCCTTC
. : . : . : . : . : . :
rJMSF045B11- CTGGTTTTCTTCGCCGGAGACTTGATAGACTTGGGCTGCTTCGGCTTCGTCGGAGTAGAT
JMSF041J21+ CTGGTTTTCTTCGCCGGAGACTTGATAGACTTGGGCTGCTTCGGCTTCGTCGGAGTAGAT
JMFN044K09+ CTGGTTTTCTTCGCCGGAGACTTGATAGACTTGGGCTGCTTCGGCTTCGTCGGAGTAGAT
JMFN030L02+ CTGGTTTTCTTCGCCGGAGACTTGATAGACTTGGGCTGCTTCGGCTTCGTCGGAGTAGAT
rJMSF041J21- CTGGTTTTCTTCGCCGGAGACTTGATAGACTTGGGCTGCTTCGGCTTCGTCGGAGTAGAT
JMSF043H06+ CTGGTTTTCTTCGCCGGAGACTTGATAGACTTGGGCTGCTTCGGCTTCGTCGGAGTAGAT
rJMSF043H06- CTGGTTTTCTTCGCCGGAGACTTGATAGACTTGGGCTGCTTCGGCTTCGTCGGAGTAGAT
JMSF021N18+ TTCTTCGCCGGAGACTTGATAGACTTGGGCTGCTTCGGCTTCGTCGGAGTAGAT
rJMSF021N18- CTGGTTTTCTTCGCCGGAGACTTGATAGACTTGGGCTGCTTCGGCTTCGTCGGAGTAGAT
____________________________________________________________
consensus CTGGTTTTCTTCGCCGGAGACTTGATAGACTTGGGCTGCTTCGGCTTCGTCGGAGTAGAT
. : . : . : . : . : . :
rJMSF045B11- TTCTTGCTCCTCTTAGCCGTAACTTTCTTCTGGATACCACCCTTCTTCACCGCCGCCGCC
JMSF041J21+ TTCTTGCTCCTCTTAGCCGTAACTTTCTTCTGGATACCACCCTTCTTCACCGCCGCCGCC
JMFN044K09+ TTCTTGCTCCTCTTAGCCGTAACTTTCTTCTGGATACCACCCTTTTTCACCGCCGCCGCC
JMFN030L02+ TTCTTGCTCCTCTTAGCCGTAACTTTCTTCTGGATACCACCCTTCTTCACCGCCGCCGCC
rJMSF041J21- TTCTTGCTCCTCTTAGCCGTAACTTTCTTCTGGATACCACCCTTCTTCACCGCCGCCGCC
JMSF043H06+ TTCTTGCTCCTCTTAGCCGTAACTTTCTTCTGGATACCACCCTTCTTCACCGCCGCCGCC
rJMSF043H06- TTCTTGCTCCTCTTAGCCGTAACTTTCTTCTGGATACCACCCTTCTTCACCGCCGCCGCC
JMSF021N18+ TTCTTGCTCCTCTTAGCCGTAACTTTCTTCTGGATACCACCCTTCTTCACCGCCGCCGCC
rJMSF021N18- TTCTTGCTCCTCTTAGCCGTAACTTTCTTCTGGATACCACCCTTCTTCACCGCCGCCGCC
____________________________________________________________
consensus TTCTTGCTCCTCTTAGCCGTAACTTTCTTCTGGATACCACCCTTCTTCACCGCCGCCGCC
. : . : . : . : . : . :
rJMSF045B11- TTCGCTTCCTCAACCGCTTTGGGCGCCGCGGCGGCACTGCTCGATTTCGGCTTCTTCGCT
JMSF041J21+ TTCGCTTCCTCAACCGCTTTGGGCGCCGCGGCGGCACTGCTCGATTTCGGCTTCTTCGCT
JMFN044K09+ TTCGCTTCCTCAACCGCTTTGGGCGCCGCGGCGGCACTGCTCGATTTCGGCTTCTTCGCT
JMFN030L02+ TTCGCTTCCTCAACCGCTTTGGGCGCCGCGGCGGCACTGCTCGATTTCGGCTTCTTCGCT
rJMSF041J21- TTCGCTTCCTCAACCGCTTTGGGCGCCGCGGCGGCACTGCTCGATTTCGGCTTCTTCGCT
JMSF043H06+ TTCGCTTCCTCAACCGCTTTGGGCGCCGCGGCGGCACTGCTCGATTTCGGCTTCTTCGCT
rJMSF043H06- TTCGCTTCCTCAACCGCTTTGGGCGCCGCGGCGGCACTGCTCGATTTCGGCTTCTTCGCT
JMSF021N18+ TTCGCTTCCTCAACCGCTTTGGGCGCCGCGGCGGCACTGCTCGATTTCGGCTTCTTCGCT
rJMSF021N18- TTCGCTTCCTCAACCGCTTTGGGCGCCGCGGCGGCACTGCTCGATTTCGGCTTCTTCGCT
____________________________________________________________
consensus TTCGCTTCCTCAACCGCTTTGGGCGCCGCGGCGGCACTGCTCGATTTCGGCTTCTTCGCT
. : . : . : . : . : . :
rJMSF045B11- GCCGTTTTGTTATTCTTACCCGCCTCGGATAGCTTGTAGGAAGCCTTGATTTTGATCAGT
JMSF041J21+ GCCGTTTTGTTCTTCTTACCCGCCTCGGATAGCTTGTAGGAAGCCTTGATTTTGATCAGT
JMFN044K09+ GCCGTTTTGTTCTTCTTACCCGCCTCGGATAGCTTGTAGGAAGCCTTGATTTTGATCAGT
JMFN030L02+ GCCGTTTTGTTCTTCTTACCCGCCTCGGATAGCTTGTAGGAAGCCTTGATTTTGATCAGT
rJMSF041J21- GCCGTTTTGTTCTTCTTACCCGCCTCGGATAGCTTGTAGGAAGCCTTGATTTTGATCAGT
JMSF043H06+ GCCGTTTTGTTCTTCTTACCCGCCTCGGATAGCTTGTAGGAAGCCTTGATTTTGATCAGT
rJMSF043H06- GCCGTTTTGTTCTTCTTACCCGCCTCGGATAGCTTGTAGGAAGCCTTGATTTTGATCAGT
JMSF021N18+ GCCGTTTTGTTCTTCTTACCCGCCTCGGATAGCTTGTAGGAAGCCTTGATTTTGATCAGT
rJMSF021N18- GCCGTTTTGTTCTTCTTACCCGCCTCGGATAGCTTGTAGGAAGCCTTGATTTTGATCAGT
____________________________________________________________
consensus GCCGTTTTGTTCTTCTTACCCGCCTCGGATAGCTTGTAGGAAGCCTTGATTTTGATCAGT
. : . : . : . : . : . :
rJMSF045B11- TTGCCCTTAGCGGCGCTGTTCTTCAGTTGCAGGCCCAGAATCTTCCGGAAATTCGCCGGC
JMSF041J21+ TTGCCCTTAGCGGCGCTGTTCTTCAGTTGCAGGCCCAGAATCTTCCGGAAATTCGCCGGC
JMFN044K09+ TTGCCCTTAGCGGCGCTGTTCTTCAGTTGCAGGCCCAGAATCTTCCGGAAATTCGCCGGC
JMFN030L02+ TTGCCCTTAGCGGCGCTGTTCTTCAGTTGCAGGCCCAGAATCTTCCGGAAATTCGCCGGC
rJMSF041J21- TTGCCCTTAGCGGCGCTGTTCTTCAGTTGCAGGCCCAGAATCTTCCGGAAATTCGCCGGC
JMSF043H06+ TTGCCCTTAGCGGCGCTGTTCTTCAGTTGCAGGCCCAGAATCTTCCGGAAATTCGCCGGC
rJMSF043H06- TTGCCCTTAGCGGCGCTGTTCTTCAGTTGCAGGCCCAGAATCTTCCGGAAATTCGCCGGC
JMSF021N18+ TTGCCCTTAGCGGCGCTGTTCTTCAGTTGCAGGCCCAGAATCTTCCGGAAATTCGCCGGC
rJMSF021N18- TTGCCCTTAGCGGCGCTGTTCTTCAGTTGCAGGCCCAGAATCTTCCGGAAATTCGCCGGC
____________________________________________________________
consensus TTGCCCTTAGCGGCGCTGTTCTTCAGTTGCAGGCCCAGAATCTTCCGGAAATTCGCCGGC
. : . : . : . : . : . :
rJMSF045B11- AGTTCGCCCTTGTGCTTCTCCTCCATGTGCTTCGCGATCGCGTATGGACTCGAGCCGTTC
JMSF041J21+ AGTTCGCCCTTGTGCTTCTCCTCCATGTGCTTCGCGATCGCGTATGGACTCGAGCCGTTC
JMFN044K09+ AGTTCGCCCTTGTGCTTCTCCTCCATGTGCTTCGCGATCGCGTATGGACTCGAGCCGTTC
JMFN030L02+ AGTTCGCCCTTGTGCTTCTCCTCCATGTGCTTCGCGATCGCGTATGGACTCGAGCCGTTC
rJMSF041J21- AGTTCGCCCTTGTGCTTCTCCTCCATGTGCTTCGCGATCGCGTATGGACTCGAGCCGTTC
JMSF043H06+ AGTTCGCCCTTGTGCTTCTCCTCCATGTGCTTCGCGATCGCGTATGGACTCGAGCCGTTC
rJMSF043H06- AGTTCGCCCTTGTGCTTCTCCTCCATGTGCTTCGCGATCGCGTATGGACTCGAGCCGTTC
JMSF021N18+ AGTTCGCCCTTGTGCTTCTCCTCCATGTGCTTCGCGATCGCGTATGGACTCGAGCCGTTC
rJMSF021N18- AGTTCGCCCTTGTGCTTCTCCTCCATGTGCTTCGCGATCGCGTATGGACTCGAGCCGTTC
____________________________________________________________
consensus AGTTCGCCCTTGTGCTTCTCCTCCATGTGCTTCGCGATCGCGTATGGACTCGAGCCGTTC
. : . : . : . : . : . :
rJMSF045B11- TTTTCGTTCAGAGCCGACAGAGCCTCCTTGATCATCTG
JMSF041J21+ TTTTCGTTCAGAGCCGACAGAGCCTCCTTGATCATCTGAAAGTAAGGAGGATGAGTCGCA
JMFN044K09+ TTTTCGTTCAGAGCCGACAGAGCCTCCTTGATCATCTGAAAGTAAGGAGGATGAGTCGCA
JMFN030L02+ TTTTCGTTCAGAGCCGACAGAGCCTCCTTGATCATCTGAAAGTAAGGAGGATGAGTCGCA
rJMSF041J21- TTTTCGTTCAGAGCCGACAGAGCCTCCTTGATCATCTGAAAGTAAGGAGGATGAGTCGCA
JMSF043H06+ TTTTCGTTCAGAGCCGACAGAGCCTCCTTGATCATCTGAAAGTAAGGAGGATGAGTCGCA
rJMSF043H06- TTTTCGTTCAGAGCCGACAGAGCCTCCTTGATCATCTGAAAGTAAGGAGGATGAGTCGCA
JMSF021N18+ TTTTCGTTCAGAGCCGACAGAGCCTCCTTGATCATCTGAAAGTAAGGAGGATGAGTCGCA
rJMSF021N18- TTTTCGTTCAGAGCCGACAGAGCCTCCTTGATCATCTGAAAGTAAGGAGGATGAGTCGCA
____________________________________________________________
consensus TTTTCGTTCAGAGCCGACAGAGCCTCCTTGATCATCTGAAAGTAAGGAGGATGAGTCGCA
. : . : . : . : . : . :
JMSF041J21+ GTTTTGGCGGCTTTAGCCTTTTTCTCTTTCGGAACCCTGACCTTCTTCTCCTTAACAGGC
JMFN044K09+ GTTTTGGCGGCTTTAGCCTTTTTCTCTTTCGGAACCCTGACCTTCTTCTCCTTAACAGGC
JMFN030L02+ GTTTTGGCGGCTTTAGCCTTTTTCTCTTTCGGAACCCTGACCTTCTTCTCCTTAACAGGC
rJMSF041J21- GTTTTGGCGGCTTTAGCCTTTTTCTCTTTCGGAACCCTGACCTTCTTCTCCTTAACAGGC
JMSF043H06+ GTTTTGGCGGCTTTAGCCTTTTTCTCTTTCGGAACCCTGACCTTCTTCTCCTTAACAGGC
rJMSF043H06- GTTTTGGCGGCTTTAGCCTTTTTCTCTTTCGGAACCCTGACCTTCTTCTCCTTAACAGGC
JMSF021N18+ GTTTTGGCGGCTTTAGCCTTTTTCTCTTTCGGAACCCTGACCTTCTTCTCCTTAACAGGC
rJMSF021N18- GTTTTGGCGGCTTTAGCCTTTTTCTCTTTCGGAACCCTGACCTTCTTCTCCTTAACAGGC
____________________________________________________________
consensus GTTTTGGCGGCTTTAGCCTTTTTCTCTTTCGGAACCCTGACCTTCTTCTCCTTAACAGGC
. : . : . : . : . : . :
JMSF041J21+ TTCGCCGCCGCTTGAGCCTCCCCGGCCGGCTGCTCCAGATTAGGTTTCTCCACTTCTCCG
JMFN044K09+ TTCGCCGCCGCTTGAGCCTCCCCGGCCGGCTGCTCCAGATTAGGTTTCTCCACTTCTCCG
JMFN030L02+ TTCGCCGCCGCTTGAGCCTCCCCGGCCGGCTGCTCCAGATTAGGTTTCTCCACTTCTCCG
rJMSF041J21- TTCGCCGCCGCTTGAGCCTCCCCGGCCGGCTGCTCCAGATTAGGTTTCTCCACTTCTCCG
JMSF043H06+ TTCGCCGCCGCTTGAGCCTCCCCGGCCGGCTGCTCCAGATTAGGTTTCTCCACTTCTCCG
rJMSF043H06- TTCGCCGCCGCTTGAGCCTCCCCGGCCGGCTGCTCCAGATTAGGTTTCTCCACTTCTCCG
JMSF021N18+ TTCGCCGCCGCTTGAGCCTCCCCGGCCGGCTGCTCCAGATTAGGTTTCTCCACTTCTCCG
rJMSF021N18- TTCGCCGCCGCTTGAGCCTCCCCGGCCGGCTGCTCCAGATTAGGTTTCTCCACTTCTCCG
____________________________________________________________
consensus TTCGCCGCCGCTTGAGCCTCCCCGGCCGGCTGCTCCAGATTAGGTTTCTCCACTTCTCCG
. : . : . : . : . : . :
JMSF041J21+ ATTGACGCCATTGCAACAATCACAAACACCTCTGTAGAAACGTCACCACACAACTCT
JMFN044K09+ ATTGACGCCATTGCAACAATCACAAACACCTCTGTAGAA
JMFN030L02+ ATTGACGCCATTGCAACAATCACAAACACCTCTGTAGAAA
rJMSF041J21- ATTGACGCCATTGCAACAATCACAAACACCTCTGTAGAAACGTCACCACACAACTCT
JMSF043H06+ ATTGACGCCATTGCAACAATCACAAACACCTCTGTAGAAACGTCACCACACAACTCTATC
rJMSF043H06- ATTGACGCCATTGCAACAATCACAAACACCTCTGTAGAAACGTCACCACACAACTCTATC
JMSF021N18+ ATTGACGCCATTGCAACAATCACAAACACCTCTGTAGAAACGTCACCACACAACTCTATC
rJMSF021N18- ATTGACGCCATTGCAACAATCACAAACACCTCTGTAGAAACGTCACCACACAACTCTATC
____________________________________________________________
consensus ATTGACGCCATTGCAACAATCACAAACACCTCTGTAGAAACGTCACCACACAACTCTATC