Contig 005674:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF018J19Sequence145005674 (3)
JMSF015L11Sequence505006708 (3)ref|XP_004239021.1|236PREDICTED: uncharacterized protein LOC101259744 [Solanum lycopersicum]790005674 (3)ref|XP_009793987.1|4e-113PREDICTED: uncharacterized protein LOC104240797 isoform X4 [Nicotiana sylvestri
JMSF021I22Sequence667006708 (3)emb|CDP00474.1|2e-127unnamed protein product [Coffea canephora]757005674 (3)ref|XP_009793987.1|7e-105PREDICTED: uncharacterized protein LOC104240797 isoform X4 [Nicotiana sylvestri

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF015L11+ AGTGCNAGGATAGAC
                      ____________________________________________________________
consensus AGTGCNAGGATAGAC
 
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rJMSF015L11+ CGAAGCTTCTCTTTGATATAATCTGCACTTTGACAGACATGCAATATGTGGTTTTCCATG
rJMSF021I22+ TGCACTTTGACAGACATGCAATATGTGGTTTTCCATG
                      ____________________________________________________________
consensus CGAAGCTTCTCTTTGATATAATCTGCACTTTGACAGACATGCAATATGTGGTTTTCCATG
 
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rJMSF015L11+ GCAATGTAGATACTGTGGGACCAAACGCTCACCAGGAGTACTGCATTCGGCATATTGATG
rJMSF021I22+ GCAATGTAGATACTGTGGGACCAAACGCTCACCAGGAGTACTGCATTCGGCATATTGATG
                      ____________________________________________________________
consensus GCAATGTAGATACTGTGGGACCAAACGCTCACCAGGAGTACTGCATTCGGCATATTGATG
 
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rJMSF015L11+ GATCCCCGGTTAAATCCGATGCAGAAAGACAAAGAGTAATTCAATGTCTTGAGGCTGCAA
rJMSF021I22+ GATCCCCGGTTAAATCCGATGCAGAAAGACAAAGAGTAATTCAATGTCTTGAGGCTGCAA
                      ____________________________________________________________
consensus GATCCCCGGTTAAATCCGATGCAGAAAGACAAAGAGTAATTCAATGTCTTGAGGCTGCAA
 
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rJMSF015L11+ TACTAAGAAGGGTATCCGAGGGATTGAAGCTAGAACTGTGTACTACTGATAGAACTGGGC
rJMSF021I22+ TACTAAGAAGGGTATCCGAGGGATTGAAGCTAGAACTGTGTACTACTGATAGAACTGGGC
                      ____________________________________________________________
consensus TACTAAGAAGGGTATCCGAGGGATTGAAGCTAGAACTGTGTACTACTGATAGAACTGGGC
 
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rJMSF015L11+ TGCTGTCTGATGTGACTCGAATCTTTCGTGAGAATAGTCTCACTGTGACCAGGGCCGAAG
rJMSF021I22+ TGCTGTCTGATGTGACTCGAATCTTTCGTGAGAATAGTCTCACTGTGACCAGGGCCGAAG
                      ____________________________________________________________
consensus TGCTGTCTGATGTGACTCGAATCTTTCGTGAGAATAGTCTCACTGTGACCAGGGCCGAAG
 
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rJMSF015L11+ TCACGACAAGAAGTGGCAAAGCAGTGAACACGTTTTATGTTCGTGATGCCTCAGGGTACC
rJMSF021I22+ TCACGACAAGAAGTGGCAAAGCAGTGAACACGTTTTATGTTCGTGATGCCTCAGGGTACC
                      ____________________________________________________________
consensus TCACGACAAGAAGTGGCAAAGCAGTGAACACGTTTTATGTTCGTGATGCCTCAGGGTACC
 
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rJMSF015L11+ CCGTAGATGCCAAGATTGTGGAGTCTGTTCGGCAAACAATTGGGCTGACAATTCTCCGGG
rJMSF021I22+ CCGTAGATGCCAAGATTGTGGAGTCTGTTCGGCAAACAATTGGGCTGACAATTCTCCGGG
                      ____________________________________________________________
consensus CCGTAGATGCCAAGATTGTGGAGTCTGTTCGGCAAACAATTGGGCTGACAATTCTCCGGG
 
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rJMSF015L11+ TGAAAGGCAGTTGTGAAGCGTTAAATTCAGCTCCTCCTCAGGAATCTCCAACCCGGTTCC
rJMSF021I22+ TGAAAGGCAGTTGTGAAGCGTTAAATTCAGCTCCTCCTCAGGAATCTCCAACCCGGTTCC
                      ____________________________________________________________
consensus TGAAAGGCAGTTGTGAAGCGTTAAATTCAGCTCCTCCTCAGGAATCTCCAACCCGGTTCC
 
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rJMSF015L11+ TCTTTGGTGGTCTCTTCAAGTCGAGATCCTTTTGCAACTTCGGTTTGGTTAGATCCTATT
rJMFF018J19+ TCTTCAAGTCGAGATCCTTNTGCAANTTCGGTTTGGNTNGATCCTATT
rJMSF021I22+ TCTTTGGTGGTCTCTTCAAGTCGAGATCCTTTTGCAACTTCGGTTTGGTTAGATCCTATT
                      ____________________________________________________________
consensus TCTTTGGTGGTCTCTTCAAGTCGAGATCCTTTTGCAACTTCGGTTTGGTTAGATCCTATT
 
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rJMSF015L11+ CCTGAAAAGGGCAATTCACAGCCATAGTCCTCTTCTCTAGATCATCCTATATTCTTGAAA
rJMFF018J19+ CCTGAAAAGGGCAATTCACAGCCATAGTCCTCTTCTCTAGATCATCCTATATTCTTGAAA
rJMSF021I22+ CCTGAAAAGGGCAATTCACAGCCATAGTCCTCTTCTCTAGATCATCCTATATTCTTGAAA
                      ____________________________________________________________
consensus CCTGAAAAGGGCAATTCACAGCCATAGTCCTCTTCTCTAGATCATCCTATATTCTTGAAA
 
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rJMSF015L11+ GGGCAATTCACCATTTGTATATTCCAGTCCCCCGCTTTTAGGCTCTCTTTTACTCAAAGT
rJMFF018J19+ GGGCAATTCNCCATTTGTATATTCCAGTCCCCCGCTT
rJMSF021I22+ GGGCAATTCACCATTTGTATATTCCAGTCCCCCGCTTTTAGGCTCTCTTTTACTCAAAGT
                      ____________________________________________________________
consensus GGGCAATTCACCATTTGTATATTCCAGTCCCCCGCTTTTAGGCTCTCTTTTACTCAAAGT
 
. : . : . : . : . : . :
rJMSF015L11+ CACAAGAAAGTTTCTTCCTTTTCTTCAGGTCTACAAGGACATCATAGCTAGTGAATGTAA
rJMSF021I22+ CACAAGAAAGTTTCTTCCTTTTCTTCAGGTCTACAAGGACATCATAGCTAGTGAATGTAA
                      ____________________________________________________________
consensus CACAAGAAAGTTTCTTCCTTTTCTTCAGGTCTACAAGGACATCATAGCTAGTGAATGTAA
 
. : . : . : . : . : . :
rJMSF015L11+ ATGTGGTTTCTTTCTTGCTTTTTTATTTCTCAACTGGAATGGACCAACACCATGT
rJMSF021I22+ ATGTGGTTTCTTTCTTGCTTTTTTATTTCTCAACTGGAATGGACCAACACCATGTTGATC
                      ____________________________________________________________
consensus ATGTGGTTTCTTTCTTGCTTTTTTATTTCTCAACTGGAATGGACCAACACCATGTTGATC