Contig 005667:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF019N07+                                                           TCCAAANGGGT
                      ____________________________________________________________
consensus                                                              TCCAAANGGGT
 
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rJMSF019N07+          AANCAATTTTCAGNATCCAATGCATCCCAGACCTGAACTGGCCTACCAGGCAAAAGGGCC
                      ____________________________________________________________
consensus             AANCAATTTTCAGNATCCAATGCATCCCAGACCTGAACTGGCCTACCAGGCAAAAGGGCC
 
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rJMFF003D04+                             CCGTATGAAGCTACAGTTGATTGTCAGCTATCTTCAGAGCC
rJMFF037M01+                             CCGTATGAAGCTACAGTTGATTGTCAGCTATCTTCAGAGCC
rJMSF019N07+          CTACTCTAACAATCTAGCCCCGTATGAAGCTACAGTTGATTGTCAGCTATCTTCAGAGCC
                      ____________________________________________________________
consensus             CTACTCTAACAATCTAGCCCCGTATGAAGCTACAGTTGATTGTCAGCTATCTTCAGAGCC
 
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rJMFF003D04+          CCGTATGACCAGTAACTGTGAGAATACTGATGATCAACTTGAATCATCTGCTGCACGTAT
rJMFF037M01+          CCGTATGACCAGTAACTGTGAGAATACTGATGATCAACTTGAATCATCTGCTGCACGTAT
rJMSF019N07+          CCGTATGACCAGTAACTGTGAGAATACTGATGATCAACTTGAATCATCTGCTGCACGTAT
                      ____________________________________________________________
consensus             CCGTATGACCAGTAACTGTGAGAATACTGATGATCAACTTGAATCATCTGCTGCACGTAT
 
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rJMFF003D04+          TTCTTTAGATAGCCAAAATATTTCCCATCCAGCAAACCAACCTCAAAATGCTTATGTGCC
rJMFF037M01+          TTCTTTAGATAGCCAAAATATTTCCCATCCAGCAAACCAACCTCAAAATGCTTATGTGCC
rJMSF019N07+          TTCTTTAGATAGCCAAAATATTTCCCATCCAGCAAACCAACCTCAAAATGCTTATGTGCC
                      ____________________________________________________________
consensus             TTCTTTAGATAGCCAAAATATTTCCCATCCAGCAAACCAACCTCAAAATGCTTATGTGCC
 
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rJMFF003D04+          AGATATTGCATCTCTTAACTTTAATAGGGAGGTTCCATTCTGTGAAATCAATGAACCTCA
rJMFF037M01+          AGATATTGCATCTCTTAACTTTAATAGGGAGGTTCCATTCTGTGAAATCAATGAACCTCA
rJMSF019N07+          AGATATTGCATCTCTTAACTTTAATAGGGAGGTTCCATTCTGTGAAATCAATGAACCTCA
                      ____________________________________________________________
consensus             AGATATTGCATCTCTTAACTTTAATAGGGAGGTTCCATTCTGTGAAATCAATGAACCTCA
 
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rJMFF003D04+          CCATGTAGCATCAGCGGACAAGTTCTTGCTCGCACCAGACCCCAACAGTCAGTTAGCTGA
rJMFF037M01+          CCATGTAGCATCAGCGGACAAGTTCTTGCTCGCACCAGACCCCAACAGTCAGTTAGCTGA
rJMSF019N07+          CCATGTAGCATCAGCGGACAAGTTCTTGCTCGCACCAGACCCCAACAGTCAGTTAGCTGA
                      ____________________________________________________________
consensus             CCATGTAGCATCAGCGGACAAGTTCTTGCTCGCACCAGACCCCAACAGTCAGTTAGCTGA
 
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rJMFF003D04+          GAACTCATTGCCCAGTGCTTTGGACTTACGTTTTGATAATTGGATGTTTGAAGATCCAGT
rJMFF037M01+          GAACTCATTGCCCAGTGCTTTGGACTTACGTTTTGATAATTGGATGTTTGAAGATCCAGT
rJMSF019N07+          GAACTCATTGCCCAGTGCTTTGGACTTACGTTTTGATAATTGGATGTTTGAAGATCCAGT
                      ____________________________________________________________
consensus             GAACTCATTGCCCAGTGCTTTGGACTTACGTTTTGATAATTGGATGTTTGAAGATCCAGT
 
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rJMFF003D04+          TGTTCCGAGGGTTATAGAAGTTTCTGTGCCTCTGGGATTGAATGCATACTCTCCTGAACC
rJMFF037M01+          TGTTCCGAGGGTTATAGAAGTTTCTGTGCCTCTGGGATTGAATGCATACTCTCCTGAACC
rJMSF019N07+          TGTTCCGAGGGTTATAGAAGTTTCTGTGCCTCTGGGATTGAATGCATACTCTCCTGAACC
                      ____________________________________________________________
consensus             TGTTCCGAGGGTTATAGAAGTTTCTGTGCCTCTGGGATTGAATGCATACTCTCCTGAACC
 
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rJMFF003D04+          TGCCCCTCTCTGGGATTGAATTCATACTCCCCTGAACCTGCTCCTGTAGATTCTTGGAAT
rJMFF037M01+          TGCCCCTCTCTGGGATTGAATTCATACTCCCCTGAACCTGCTCCTGTAGATTCTTGGAAT
rJMSF019N07+          TGCCCCTCTCTGGGATTGAATTCATACTCCCCTGAACCTGCTCCTGTAGATTCTTGGAAT
                      ____________________________________________________________
consensus             TGCCCCTCTCTGGGATTGAATTCATACTCCCCTGAACCTGCTCCTGTAGATTCTTGGAAT
 
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rJMFF003D04+          CTTTTCTAATATTTGGCCTAAAACTGGCATAATGCATCTCTGCCCTAAAATGTCTGGAGC
rJMFF037M01+          CTTTTCTAATATTTGGCCTAAAACTGGCATAATGCATCTCTGCCCTAAAATGTCTGGAGC
rJMSF019N07+          CTTTTCTAATATTTGGCCTAAAACTGGCATAATGCATCTCTGCCCTAAAATGTCTGGAGC
                      ____________________________________________________________
consensus             CTTTTCTAATATTTGGCCTAAAACTGGCATAATGCATCTCTGCCCTAAAATGTCTGGAGC
 
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rJMFF003D04+          ATTTGTTTCTTGTCTGACTCACCATGCCATTTTAAAGGTTAGAGAAGGAATATACACTCT
rJMFF037M01+          ATTTGTTTCTTGTCTGACTCACCATGCCATTTTAAAGGTTAGAGAAGGAATATACACTCT
rJMSF019N07+          ATTTGTTTCTTGTCTGACTCACCATGCCATTTTAAAGGTTAGAGAAGGAATATACACTCT
                      ____________________________________________________________
consensus             ATTTGTTTCTTGTCTGACTCACCATGCCATTTTAAAGGTTAGAGAAGGAATATACACTCT
 
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rJMFF003D04+          AGGTTTAACCTAGGTTTCTGTTGTACTCTAGTTATGCACTTCAAGTGTACACAGATTGCA
rJMFF037M01+          AGGTTTAACCTAGGTTTCTGTTGTACTCTAGTTATGCACTTCAAGTGTACACAGATTGCA
rJMSF019N07+          AGGTTTAACCTAGGTTTCTGTTGTACTCTAGTTATGCACTTCAAGTGTACACAGATTGCA
                      ____________________________________________________________
consensus             AGGTTTAACCTAGGTTTCTGTTGTACTCTAGTTATGCACTTCAAGTGTACACAGATTGCA
 
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rJMFF003D04+          ATATCTGTACAGAGATTAGGCTCATCCAGTTGAATGAAGAGCAAATTATGAT        
rJMFF037M01+          ATATCTGTACAGAGATTAGGCTCATCCAGTTGAATGGAGAGCAA                
rJMSF019N07+          ATATCTGTACAGAGATTAGGCTCATCCAGTTGAATGAAGAGCAAATTATGATTAAGAAAT
                      ____________________________________________________________
consensus             ATATCTGTACAGAGATTAGGCTCATCCAGTTGAATGAAGAGCAAATTATGATTAAGAAAT