Contig 005666:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF019I16Sequence559005666 (2)ref|XP_011075964.1|3e-95PREDICTED: protein ABIL2-like [Sesamum indicum]829005666 (2)emb|CBI23020.3|3e-46unnamed protein product [Vitis vinifera]

Alignment

This contig is upended


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JMSF019I16-                                               AGTCTTGGCTGCTCAAGAAAGCCA
                      ____________________________________________________________
consensus                                                 AGTCTTGGCTGCTCAAGAAAGCCA
 
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JMSF019I16-           AAGAAAATCTGAAATTTGCCACAGGATAAGGACATTGTACCAATTGCTACTAAATGGAGA
                      ____________________________________________________________
consensus             AAGAAAATCTGAAATTTGCCACAGGATAAGGACATTGTACCAATTGCTACTAAATGGAGA
 
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JMSF019I16-           CCTTAACTACCACTGCAATGCCCTTCCCTCGAGAGCCAGCAAATTATGACGAGGTATCAA
                      ____________________________________________________________
consensus             CCTTAACTACCACTGCAATGCCCTTCCCTCGAGAGCCAGCAAATTATGACGAGGTATCAA
 
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JMSF019I16-           TGCAGCAAAGCGTGCTGTTCTCCGACAGTCTTAAGGACTTGAAGAATCTCAGGAAACAAC
                      ____________________________________________________________
consensus             TGCAGCAAAGCGTGCTGTTCTCCGACAGTCTTAAGGACTTGAAGAATCTCAGGAAACAAC
 
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JMSF019I16-           TCTACTCTGCAGCTGAATATTTTGAGTTATCGTACTCCAACGATGACCAAAAACATGTAG
                      ____________________________________________________________
consensus             TCTACTCTGCAGCTGAATATTTTGAGTTATCGTACTCCAACGATGACCAAAAACATGTAG
 
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JMSF019I16-           TGGTAAATACATTGAAAGATTATGCCATTAAAGCTCTTGTGAACACCGTTGATCATTTGG
                      ____________________________________________________________
consensus             TGGTAAATACATTGAAAGATTATGCCATTAAAGCTCTTGTGAACACCGTTGATCATTTGG
 
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JMSF019I16-           GCTCCGTGACTTATAAGGTCAATGATCTATTAGACGAAAAAGTAGATGAAGTTTCTGGAA
                      ____________________________________________________________
consensus             GCTCCGTGACTTATAAGGTCAATGATCTATTAGACGAAAAAGTAGATGAAGTTTCTGGAA
 
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JMSF019I16-           CTGAACTTCGGGTATCTTCCATTGAGCAGAGACTAAGGTCATGCCAGGGATATATTGATC
                      ____________________________________________________________
consensus             CTGAACTTCGGGTATCTTCCATTGAGCAGAGACTAAGGTCATGCCAGGGATATATTGATC
 
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JMSF019I16-           GCGAGGGTCTTTCACAGCAATCGTTAGTTATAAATACTCCTAAGTACCATAAACGATACA
rJMSF019I16+                                          AATACTCCTAAGTACCATAAACGATACA
                      ____________________________________________________________
consensus             GCGAGGGTCTTTCACAGCAATCGTTAGTTATAAATACTCCTAAGTACCATAAACGATACA
 
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JMSF019I16-           TCTTGCCAGTTGGTGAAGCGTTGCGTGGTCTTGATGCANAAGATGACTGGAATCA     
rJMSF019I16+          TCTTGCCAGNTGGTGAAGCGTTGCGTGGTCTTGATGCAGAAGATGACTGGAATCAGTTTC
                      ____________________________________________________________
consensus             TCTTGCCAGTTGGTGAAGCGTTGCGTGGTCTTGATGCAGAAGATGACTGGAATCAGTTTC
 
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rJMSF019I16+          GAAATGCTGTTCGTGCAACGATTACAGAAGCTCCATCATCTGCAGTTGTAAAAGGGCGCT
                      ____________________________________________________________
consensus             GAAATGCTGTTCGTGCAACGATTACAGAAGCTCCATCATCTGCAGTTGTAAAAGGGCGCT
 
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rJMSF019I16+          CTCCATCACCTTCTCCACGACTTTCTCACCAACAACCTCGTGATTTCTCGTTCTCGAAGA
                      ____________________________________________________________
consensus             CTCCATCACCTTCTCCACGACTTTCTCACCAACAACCTCGTGATTTCTCGTTCTCGAAGA
 
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rJMSF019I16+          CCATGCCAAGAAGAGAACTAGAGAAGCGGACAGTGTCACCACACCGTTTTCCTCTTCTAC
                      ____________________________________________________________
consensus             CCATGCCAAGAAGAGAACTAGAGAAGCGGACAGTGTCACCACACCGTTTTCCTCTTCTAC
 
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rJMSF019I16+          GAACAGCATCTTTCGCCAGCAGGTCCACTACGCCTAAAACATCTCGCCCAACCACCCCAA
                      ____________________________________________________________
consensus             GAACAGCATCTTTCGCCAGCAGGTCCACTACGCCTAAAACATCTCGCCCAACCACCCCAA
 
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rJMSF019I16+          AAGGCTCCCGGTCAACCACCCCAAATTCAAGTCGACCAACCACTCCAAACCCCAGACGCC
                      ____________________________________________________________
consensus             AAGGCTCCCGGTCAACCACCCCAAATTCAAGTCGACCAACCACTCCAAACCCCAGACGCC
 
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rJMSF019I16+          TGTATCCTGCAGAACCTCGCAAATCAGCCTCAATGCGGCTCCATGCTGAAAAAGATATAC
                      ____________________________________________________________
consensus             TGTATCCTGCAGAACCTCGCAAATCAGCCTCAATGCGGCTCCATGCTGAAAAAGATATAC
 
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rJMSF019I16+          CAAGAGATTCCGATGAGTACCCCAGCAAAAGTAAACGCCTTCTTAAATCTTTGCTTAGCC
                      ____________________________________________________________
consensus             CAAGAGATTCCGATGAGTACCCCAGCAAAAGTAAACGCCTTCTTAAATCTTTGCTTAGCC
 
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rJMSF019I16+          GACGCAAATCAAAGAAAGATGAAGTGCTATATACATACCTCGATGAATACTGACGATACA
                      ____________________________________________________________
consensus             GACGCAAATCAAAGAAAGATGAAGTGCTATATACATACCTCGATGAATACTGACGATACA
 
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rJMSF019I16+          CGATCAATCAATACAATCCCTTTAAGCAAAGAAGAAACTCGGGCATGCTCCCTTCACTCA
                      ____________________________________________________________
consensus             CGATCAATCAATACAATCCCTTTAAGCAAAGAAGAAACTCGGGCATGCTCCCTTCACTCA
 
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rJMSF019I16+          AATTTATCATGATTTTGCAGTGTTACAGAGTATATTACATTTCAAAGTCCATTACAATGT
                      ____________________________________________________________
consensus             AATTTATCATGATTTTGCAGTGTTACAGAGTATATTACATTTCAAAGTCCATTACAATGT
 
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rJMSF019I16+          ATCCTTGAAAATCTGTTTACTAGTAGAGTTATAAGGTGTAATCTTGATTGTGAAGAAGAT
                      ____________________________________________________________
consensus             ATCCTTGAAAATCTGTTTACTAGTAGAGTTATAAGGTGTAATCTTGATTGTGAAGAAGAT
 
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rJMSF019I16+          ATGTATAAACAGTTTCCTCAAACAATTGCAGAACTTTTCATTGTTGTCAAAGCAAATGTC
                      ____________________________________________________________
consensus             ATGTATAAACAGTTTCCTCAAACAATTGCAGAACTTTTCATTGTTGTCAAAGCAAATGTC