Contig 005665:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF019F22+                                             TTGTAGAAGTGTAGAGCATCTTCGG
                      ____________________________________________________________
consensus                                                TTGTAGAAGTGTAGAGCATCTTCGG
 
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rJMSF019F22+          CAAGACCGGCAGCCCTGTTTTCCCCTCCCTTTTGATCATCAGCGACAAGCCACAAGAGGA
                      ____________________________________________________________
consensus             CAAGACCGGCAGCCCTGTTTTCCCCTCCCTTTTGATCATCAGCGACAAGCCACAAGAGGA
 
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rJMSF019F22+          GCTTCGGCCAAGCAGCATCGGTAGAAGATGGGGACAACGGCAGTGCATTGATTGAAGCTC
                      ____________________________________________________________
consensus             GCTTCGGCCAAGCAGCATCGGTAGAAGATGGGGACAACGGCAGTGCATTGATTGAAGCTC
 
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rJMSF019F22+          CGGCCTTTTCCTCTGTTTCCGGTGAAGAAGCAAAGCAGCGGTGGACGTCGGAATCTTGAG
                      ____________________________________________________________
consensus             CGGCCTTTTCCTCTGTTTCCGGTGAAGAAGCAAAGCAGCGGTGGACGTCGGAATCTTGAG
 
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rJMSF004P02+                                                  ATCTCCGGCAAGCTGTGCGT
rJMSF019F22+          ACGGTGGAGGCAGTTTTGCGTTGCGATGCTTCTCCCTCCTATCTCCGGCAAGCTGTGCGT
                      ____________________________________________________________
consensus             ACGGTGGAGGCAGTTTTGCGTTGCGATGCTTCTCCCTCCTATCTCCGGCAAGCTGTGCGT
 
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rJMSF004P02+          CGACGGTGTTGATGATGGATGATCGGGGTTCTCTGTTTCCGGCAAAGCAGAGCTGCTCGG
rJMSF019F22+          CGACGGTGTTGATGATGGATGATCGGGGTTCTCTGTTTCCGGCAAAGCAGAGCTGCTCGG
                      ____________________________________________________________
consensus             CGACGGTGTTGATGATGGATGATCGGGGTTCTCTGTTTCCGGCAAAGCAGAGCTGCTCGG
 
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rJMSF004P02+          CGGCGTGGGAGGCCTTCCGCCGTGCTACGAGTCTCCGGCGAAGCAGAGCAGGCGCGGGTG
rJMSF019F22+          CGGCGTGGGAGGCCTTCCGCCGTGCTACGAGTCTCCGGCGAAGCAGAGCAGGCGCGGGTG
                      ____________________________________________________________
consensus             CGGCGTGGGAGGCCTTCCGCCGTGCTACGAGTCTCCGGCGAAGCAGAGCAGGCGCGGGTG
 
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rJMSF004P02+          GAGGGTGAACCCGTGTTCCACCCGCGGGATGGTGAGCATGTAGAACGAAGAAGAAGATGG
rJMSF019F22+          GAGGGTGAACCCGTGTTCCACCCGCGGGATGGTGAGCATGTAGAACGAAGAAGAAGATGG
                      ____________________________________________________________
consensus             GAGGGTGAACCCGTGTTCCACCCGCGGGATGGTGAGCATGTAGAACGAAGAAGAAGATGG
 
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rJMSF004P02+          CGGATGAAGAGGAGGATTTGAACAATCCAGGCTTAGAGTAATTGAGGACAATAAGCTTTC
rJMSF019F22+          CGGATGAAGAGGAGGATTTGAACAATCCAGGCTTAGAGTAATTGAGGACAATAAGCTTTC
                      ____________________________________________________________
consensus             CGGATGAAGAGGAGGATTTGAACAATCCAGGCTTAGAGTAATTGAGGACAATAAGCTTTC
 
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rJMSF004P02+          AAG                                                         
rJMSF019F22+          AAGTTTCTTTTGCAGGTACACCTTGCATGACATTGGGAGCATGAGAGCGATTTATCCTTT
                      ____________________________________________________________
consensus             AAGTTTCTTTTGCAGGTACACCTTGCATGACATTGGGAGCATGAGAGCGATTTATCCTTT
 
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rJMSF019F22+          AGAGATTTGGAGTTTTATTTTGTTAGAAAATTTAGAAGTTGTACCTAGACAATTGTATTA
                      ____________________________________________________________
consensus             AGAGATTTGGAGTTTTATTTTGTTAGAAAATTTAGAAGTTGTACCTAGACAATTGTATTA
 
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rJMSF019F22+          TTTGAGTTATTAGACTAGTCTTAGTTTTTGGTTGTTTTTGGTAGTGTTGGTTTTAGCCTG
                      ____________________________________________________________
consensus             TTTGAGTTATTAGACTAGTCTTAGTTTTTGGTTGTTTTTGGTAGTGTTGGTTTTAGCCTG
 
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rJMSF019F22+          TGCGTTTAGATATAGCTTGTATTGAAANCGTGGCGGTAGCATCCCTTTTTCCCTTGTTTG
                      ____________________________________________________________
consensus             TGCGTTTAGATATAGCTTGTATTGAAANCGTGGCGGTAGCATCCCTTTTTCCCTTGTTTG