Contig 005658:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF017A07Sequence378011973 (2)800005658 (2)ref|XP_011078823.1|3e-120PREDICTED: nudix hydrolase 23, chloroplastic [Sesamum indicum]
JMSF027N21Sequence364011973 (2)115005658 (2)

Alignment

This contig is upended


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rJMSF017A07+                                                 CCTTGCACCGAATTGCTTTAT
                      ____________________________________________________________
consensus                                                    CCTTGCACCGAATTGCTTTAT
 
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rJMSF017A07+          TGTCTCATTTGCTTAGCGTTTACCACTCCACAGGTAGGTATTCGCANGATCAAGTTTTGC
                      ____________________________________________________________
consensus             TGTCTCATTTGCTTAGCGTTTACCACTCCACAGGTAGGTATTCGCANGATCAAGTTTTGC
 
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rJMSF017A07+          CAGTCATGTGGTGGCTCCATGAAGCATGAGATTCCTGATGGGGAGGAGAAGGTGAGAGCT
                      ____________________________________________________________
consensus             CAGTCATGTGGTGGCTCCATGAAGCATGAGATTCCTGATGGGGAGGAGAAGGTGAGAGCT
 
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rJMSF017A07+          ATTTGTACCGTTTGTGGGAGGATCGCTTATGAGAACCCAAAAATGGTTGTTGGCTGCCTT
                      ____________________________________________________________
consensus             ATTTGTACCGTTTGTGGGAGGATCGCTTATGAGAACCCAAAAATGGTTGTTGGCTGCCTT
 
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rJMSF017A07+          ATCGAGCATGATAACAAGATACTGTTGTGCAAACGGAACATTCAGCCATCACATGGCCTT
                      ____________________________________________________________
consensus             ATCGAGCATGATAACAAGATACTGTTGTGCAAACGGAACATTCAGCCATCACATGGCCTT
 
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rJMSF017A07+          TGGACACTTCCTGCCGGTTACCTGGAGATGGGCGAATCTACAGTAGAAGGCGCAATGAGA
                      ____________________________________________________________
consensus             TGGACACTTCCTGCCGGTTACCTGGAGATGGGCGAATCTACAGTAGAAGGCGCAATGAGA
 
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rJMSF027N21+                                                                  GGAC
rJMSF017A07+          GAAACCTGGGAAGAGGCAGGTGCAGAAGTTGAAATTATCTCACCGTTTGCTCAGTTGGAC
                      ____________________________________________________________
consensus             GAAACCTGGGAAGAGGCAGGTGCAGAAGTTGAAATTATCTCACCGTTTGCTCAGTTGGAC
 
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rJMSF027N21+          ATCCCGCTTATTGGCCAANCATACATAATTTTNTTGGCCAAGGNGAAGAGACNTCATTTT
rJMSF017A07+          ATCCCGCTTATTGGCCAAACATACATAATTTTCTTGGCCAAGTTGAAGAGACCTCATTTT
                      ____________________________________________________________
consensus             ATCCCGCTTATTGGCCAAACATACATAATTTTCTTGGCCAAGTTGAAGAGACCTCATTTT
 
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rJMSF027N21+          TGAACNCGGTCCAGAATCATCAGAGTGTNGGNTTTTTGAGANTGAAGAAAT         
rJMSF017A07+          T-CGCCCGGTCCAGAATCATCAGAGTGTCGGCTTTTTGAGATTGAAGAAATCCCCTTCGA
                      ____________________________________________________________
consensus             TGCGCCCGGTCCAGAATCATCAGAGTGTCGGCTTTTTGAGATTGAAGAAATCCCCTTCGA
 
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rJMSF017A07+          GTCTTTGGCGTTCTCATCCATGTTGGTCACTTTGAAGTTGTACATAGAAGATAAAAAAGT
                      ____________________________________________________________
consensus             GTCTTTGGCGTTCTCATCCATGTTGGTCACTTTGAAGTTGTACATAGAAGATAAAAAAGT
 
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rJMSF017A07+          TGGAAGACCAATGTTTCACTATGGCATCATTAACAAGAGGCCAGGCACCAGCCCCTCTGA
                      ____________________________________________________________
consensus             TGGAAGACCAATGTTTCACTATGGCATCATTAACAAGAGGCCAGGCACCAGCCCCTCTGA
 
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rJMSF017A07+          GATTCATGCCTACACCCTCGATAATCATGTGCAGTGTTGATGAATGGTGATTCGGCCCTC
                      ____________________________________________________________
consensus             GATTCATGCCTACACCCTCGATAATCATGTGCAGTGTTGATGAATGGTGATTCGGCCCTC
 
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rJMSF017A07+          GACTTCTAAATCTTCCCCGTTCCCCATTGTAAGATTCACAGTTTGATATTAACTCGAAAT
                      ____________________________________________________________
consensus             GACTTCTAAATCTTCCCCGTTCCCCATTGTAAGATTCACAGTTTGATATTAACTCGAAAT
 
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rJMSF017A07+          GCTTGAAACAACAGTTTCTCTTTNTCATGATCTGAACCAGTTCTGCTGTTCACTCCAATC
                      ____________________________________________________________
consensus             GCTTGAAACAACAGTTTCTCTTTNTCATGATCTGAACCAGTTCTGCTGTTCACTCCAATC