Contig 005656:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF016O20Sequence242009415 (3)800005656 (3)ref|XP_009603394.1|220PREDICTED: uncharacterized protein LOC104098381 [Nicotiana tomentosiformis]
JMSF028O07Sequence677009415 (3)ref|XP_009772209.1|2e-74PREDICTED: uncharacterized protein LOC104222660 isoform X2 [Nicotiana sylvestri728005656 (3)ref|XP_009603394.1|205PREDICTED: uncharacterized protein LOC104098381 [Nicotiana tomentosiformis]
JMSF031E20Sequence677009415 (3)ref|XP_009772209.1|2e-74PREDICTED: uncharacterized protein LOC104222660 isoform X2 [Nicotiana sylvestri736005656 (3)ref|XP_009603394.1|209PREDICTED: uncharacterized protein LOC104098381 [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF016O20+ ACTAGATGNCCTGATGNCAAT
                      ____________________________________________________________
consensus ACTAGATGNCCTGATGNCAAT
 
. : . : . : . : . : . :
rJMSF031E20+ CATGCTCTTGTTT
rJMSF028O07+ CTCTTGTTT
rJMSF016O20+ AATTTCTATGAAGCTGTCATTACTGATACAACCCAACTGAGGGACGACATGCTCTTGTTT
                      ____________________________________________________________
consensus AATTTCTATGAAGCTGTCATTACTGATACAACCCAACTGAGGGACGACATGCTCTTGTTT
 
. : . : . : . : . : . :
rJMSF031E20+ ATGACATGGNCACCACAAATGAGACATGGGAATGGGTCAACCTATCAGAGATTTCTCCAG
rJMSF028O07+ ATGACATGGGCACCACAAATGAGACATGGGAATGGGTCAACCTATCAGAGATTTCTCCAG
rJMSF016O20+ ATGACATGGGCACCACAANTGAGACATGGGAATGGGTCAACCTATCAGAGATTTCTCCAG
                      ____________________________________________________________
consensus ATGACATGGGCACCACAAATGAGACATGGGAATGGGTCAACCTATCAGAGATTTCTCCAG
 
. : . : . : . : . : . :
rJMSF031E20+ AGGATATACAATGGGACGAGGGACCTGGCCATGTAGTTAATAGGGCTATTGGTCGGGATA
rJMSF028O07+ AGGATATACAATGGGACGAGGGACCTGGCCATGTAGTTAATAGGGCTATTGGTCGGGATA
rJMSF016O20+ AGGATATACAATGGGACGAGGGACCTGGCCATGTAGTTAATAGGGCTATTGGTCGGGATA
                      ____________________________________________________________
consensus AGGATATACAATGGGACGAGGGACCTGGCCATGTAGTTAATAGGGCTATTGGTCGGGATA
 
. : . : . : . : . : . :
rJMSF031E20+ GTGCTCCAAGTCTAGGGAGAGGTCGGGGGTTGACTAAATCTCAATCTAGAAAGGACTTTC
rJMSF028O07+ GTGCTCCAAGTCTAGGGAGAGGTCGGGGGTTGACTAAATCTCAATCTAGAAAGGACTTTC
rJMSF016O20+ GTGCTCCAAGTCTAGGGAGAGGTCGGGGGTTGACTAAATCTCAATCTAGAAAGGACTTTC
                      ____________________________________________________________
consensus GTGCTCCAAGTCTAGGGAGAGGTCGGGGGTTGACTAAATCTCAATCTAGAAAGGACTTTC
 
. : . : . : . : . : . :
rJMSF031E20+ CACCATCACAGAATGGTATTGGAAAGAAAGGCATGGATGATATTCAGTTACTTCACACGG
rJMSF028O07+ CACCATCACAGAATGGTATTGGAAAGAAAGGCATGGATGATATTCAGTTACTTCACACGG
rJMSF016O20+ CACCATCACAGAATGGTATTGGAAAGAAAGGCATGGATGATATTCAGTTACTTCACACGG
                      ____________________________________________________________
consensus CACCATCACAGAATGGTATTGGAAAGAAAGGCATGGATGATATTCAGTTACTTCACACGG
 
. : . : . : . : . : . :
rJMSF031E20+ ATACATTAATTAAGGAGGTGGAGAGGGTATTTGGTGTCAGCAATCCTGATCCTCTAGAGG
rJMSF028O07+ ATACATTAATTAAGGAGGTGGAGAGGGTATTTGGTGTCAGCAATCCTGATCCTCTAGAGG
rJMSF016O20+ ATACATTAATTAAGGAGGTGGAGAGGGTATTTGGTGTCAGCAATCCTGATCCTCTAGAGG
                      ____________________________________________________________
consensus ATACATTAATTAAGGAGGTGGAGAGGGTATTTGGTGTCAGCAATCCTGATCCTCTAGAGG
 
. : . : . : . : . : . :
rJMSF031E20+ TTGAAAAGGCAAAGAAAGTGCTTAAGGAGCATGAACAAGCACTTATAGATGCTATTCAAA
rJMSF028O07+ TTGAAAAGGCAAAGAAAGTGCTTAAGGAGCATGAACAAGCACTTATAGATGCTATTCAAA
rJMSF016O20+ TTGAAAAGGCAAAGAAAGTGCTTAAGGAGCATGAACAAGCACTTATAGATGCTATTCAAA
                      ____________________________________________________________
consensus TTGAAAAGGCAAAGAAAGTGCTTAAGGAGCATGAACAAGCACTTATAGATGCTATTCAAA
 
. : . : . : . : . : . :
rJMSF031E20+ GGCTAGGAGAGATTTCAGATGGCGAAAGTGATGAACGTGGTCATTTCATGCATGGGCAAG
rJMSF028O07+ GGCTAGGAGAGATTTCAGATGGCGAAAGTGATGAACGTGGTCATTTCATGCATGGGCAAG
rJMSF016O20+ GGCTAGGAGAGATTTCAGATGGCGAAAGTGATGAACGTGGTCATTTCATGCATGGGCAAG
                      ____________________________________________________________
consensus GGCTAGGAGAGATTTCAGATGGCGAAAGTGATGAACGTGGTCATTTCATGCATGGGCAAG
 
. : . : . : . : . : . :
rJMSF031E20+ AATGATGACGTGATGACCTGATGGCAATGACTAGCATTGTAGTTGGGGGGAACTATTTAA
rJMSF028O07+ AATGATGACGTGATGACCTGATGGCAATGACTAGCATTGTAGTTGGGGGGAACTATTTAA
rJMSF016O20+ AATGATGACGTGATGACCTGATGGCAATGACTAGCATTGTAGTTGGGGGGAACTATTTAA
                      ____________________________________________________________
consensus AATGATGACGTGATGACCTGATGGCAATGACTAGCATTGTAGTTGGGGGGAACTATTTAA
 
. : . : . : . : . : . :
rJMSF031E20+ ACTAATGGAGCAGGGATATATCAGGCTTTTGGTGGGTTTTCCAGTGTTTAAAATGGCAGA
rJMSF028O07+ ACTAATGGAGCAGGGATATATCAGGCTTTTGGTGGGTTTTCCAGTGTTTAAAATGGCAGA
rJMSF016O20+ ACTAATGGAGCAGGGATATATCAGGCTTTTGGTGGGTTTTCCAGTGTTTAAAATGGCAGA
                      ____________________________________________________________
consensus ACTAATGGAGCAGGGATATATCAGGCTTTTGGTGGGTTTTCCAGTGTTTAAAATGGCAGA
 
. : . : . : . : . : . :
rJMSF031E20+ ATGAATGTTAGGCATGTTGTATGATGCCACCTTCAAGTGTCACTGTACTAACAATGATCC
rJMSF028O07+ ATGAATGTTAGGCATGTTGTATGATGCCACCTTCAAGTGTCACTGTACTAACAATGATCC
rJMSF016O20+ ATGAATGTTAGGCATGTTGTATGATGCCACCTTCAAGTGTCACTGTACTAACAATGATCC
                      ____________________________________________________________
consensus ATGAATGTTAGGCATGTTGTATGATGCCACCTTCAAGTGTCACTGTACTAACAATGATCC
 
. : . : . : . : . : . :
rJMSF031E20+ TTTTAGTGTTAGGGTTGGGTGAATAGGTCAACTTGAAGATTGTTTTCTATAGCGGCTGTT
rJMSF028O07+ TTTTAGTGTTAGGGTTGGGTGAATAGGTCAACTTGAAGATTGTTTTCTATAGTGGCTGTT
rJMSF016O20+ TTTTAGTGTTAGGGTTGGGTGAATAGGTCAACTTGAAGATTGTTTTCTATAGTGGCTGTT
                      ____________________________________________________________
consensus TTTTAGTGTTAGGGTTGGGTGAATAGGTCAACTTGAAGATTGTTTTCTATAGTGGCTGTT
 
. : . : . : . : . : . :
rJMSF031E20+ TAGTGCCTTTTGTAAAATTGTTA-CGGTAGAGATTAAACATGTGATGGTGTACAAATTT
rJMSF028O07+ TAGTGCCTTTTGTAAAATTGTTACCGGTAGAGATTAANCATGTGATGGTGTACAAATTT
rJMSF016O20+ TAGTGCCTTTTGTAAAATTGTTA-CGGTAGAGATTAAACATGTGATGGTGTACAAATTTA
                      ____________________________________________________________
consensus TAGTGCCTTTTGTAAAATTGTTA-CGGTAGAGATTAAACATGTGATGGTGTACAAATTTA