Contig 005653:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF003D03+                                        GGCAGACAGATCTCCTTGNTGCAGCTGCCA
                      ____________________________________________________________
consensus                                           GGCAGACAGATCTCCTTGNTGCAGCTGCCA
 
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rJMSF003D03+          AGACTGGCAAAATAATCAATATCAAGAAAGGACAGTTTTGTGCGCCATCTGTCATGTTAA
rJMSF016M11+                                    AAAGGACAGTTTTGTGCGCCATCTGTCATGTTAA
                      ____________________________________________________________
consensus             AGACTGGCAAAATAATCAATATCAAGAAAGGACAGTTTTGTGCGCCATCTGTCATGTTAA
 
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rJMSF003D03+          ATTCTGCTGAAAAGGTCAGATTGGCTGGAAATCAAAATGTCATGGTATGTGAGAGAGGCA
rJMSF016M11+          ATTCTGCTGAAAAGGTCAGATTGGCTGGAAATCAAAATGTCATGGTATGTGAGAGAGGCA
                      ____________________________________________________________
consensus             ATTCTGCTGAAAAGGTCAGATTGGCTGGAAATCAAAATGTCATGGTATGTGAGAGAGGCA
 
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rJMSF003D03+          CCATGTTTGGCTATAATGACTTGATAGTTGATCCCCGCAACTTAGAGTGGATGAGGGAAG
rJMSF016M11+          CCATGTTTGGCTATAATGACTTGATAGTTGATCCCCGCAACTTAGAGTGGATGAGGGAAG
                      ____________________________________________________________
consensus             CCATGTTTGGCTATAATGACTTGATAGTTGATCCCCGCAACTTAGAGTGGATGAGGGAAG
 
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rJMSF003D03+          CTAATTGTCCAGTTGTGGCTGATATAACACATTCTTTGCAACAACCTGCTGGGAAGAAGT
rJMSF016M11+          CTAATTGTCCAGTTGTGGCTGATATAACACATTCTTTGCAACAACCTGCTGGGAAGAAGT
                      ____________________________________________________________
consensus             CTAATTGTCCAGTTGTGGCTGATATAACACATTCTTTGCAACAACCTGCTGGGAAGAAGT
 
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rJMSF003D03+          TGGATGGTGGAGGTGTTGCTAGTGGTGGTCTTCGTGAATTGATTCCTTGCATTGCCAGGA
rJMSF016M11+          TGGATGGTGGAGGTGTTGCTAGTGGTGGTCTTCGTGAATTGATTCCTTGCATTGCCAGGA
                      ____________________________________________________________
consensus             TGGATGGTGGAGGTGTTGCTAGTGGTGGTCTTCGTGAATTGATTCCTTGCATTGCCAGGA
 
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rJMSF003D03+          CAGCAGTTGCTGTTGGAGTGGATGGACTTTTTATGGAGGTGCATAATGATCCTTTAAATG
rJMSF016M11+          CAGCAGTTGCTGTTGGAGTGGATGGACTTTTTATGGAGGTGCATAATGATCCTTTAAATG
                      ____________________________________________________________
consensus             CAGCAGTTGCTGTTGGAGTGGATGGACTTTTTATGGAGGTGCATAATGATCCTTTAAATG
 
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rJMSF003D03+          CTCCAGTTGATGGTCCTACCCAGTGGCCTCTTCGCCATCTGGAAGAACTGCTAGAAGAGC
rJMSF016M11+          CTCCAGTTGATGGTCCTACCCAGTGGCCTCTTCGCCATCTGGAAGAACTGCTAGAAGAGC
                      ____________________________________________________________
consensus             CTCCAGTTGATGGTCCTACCCAGTGGCCTCTTCGCCATCTGGAAGAACTGCTAGAAGAGC
 
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rJMSF003D03+          TCATTGCTATTGGTAGGGTCAGCAAAGGGAAGAAGCAATTCAAAATTGATCTCACTCCAG
rJMSF016M11+          TCATTGCTATTGGTAGGGTCAGCAAAGGGAAGAAGCAATTCAAAATTGATCTCACTCCAG
                      ____________________________________________________________
consensus             TCATTGCTATTGGTAGGGTCAGCAAAGGGAAGAAGCAATTCAAAATTGATCTCACTCCAG
 
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rJMSF003D03+          TCTGCGATTAGATTTTTCCGTGATGGACGTTGATTTCAGTGTGGTTGCTGCACCAAAGCA
rJMSF016M11+          TCTGCGATTAGATTTTTCCGTGATGGACGTTGATTTCAGTGTGGTTGCTGCACCAAAGCA
                      ____________________________________________________________
consensus             TCTGCGATTAGATTTTTCCGTGATGGACGTTGATTTCAGTGTGGTTGCTGCACCAAAGCA
 
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rJMSF003D03+          ATAGGCCTTCTGGCCTTGCCTCTCTTTCATCAATATAAATAATGTAGACATGAGTCTACT
rJMSF016M11+          ATAGGCCTTCTGGCCTTGCCTCTCTTTCATCAATATAAATAATGTAGACATGAGTCTACT
                      ____________________________________________________________
consensus             ATAGGCCTTCTGGCCTTGCCTCTCTTTCATCAATATAAATAATGTAGACATGAGTCTACT
 
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rJMSF003D03+          ACAGAGGCAATGATCTGGTATTGACGATTATTATGAACATTCATCTCTGTGGCAACCAAC
rJMSF016M11+          ACAGAGGCAATGATCTGGTATTGACGATTATTATGAACATTCATCTCTGTGGCAACCAAC
                      ____________________________________________________________
consensus             ACAGAGGCAATGATCTGGTATTGACGATTATTATGAACATTCATCTCTGTGGCAACCAAC
 
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rJMSF003D03+          ATTTGTATTTGGATTGATTAAGATTATGGATTCATGATTGTATAACTACGCCGGTCGTTT
rJMSF016M11+          ATTTGTATTTGGATTGATTAAGATTATGGATTCATGATTGTATAACTACGCCGGTCGTTT
                      ____________________________________________________________
consensus             ATTTGTATTTGGATTGATTAAGATTATGGATTCATGATTGTATAACTACGCCGGTCGTTT
 
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rJMSF003D03+          TTACTTTTTCTTAGAAATTGCTCCGGAGTAT                             
rJMSF016M11+          TTACTTTTTCTTAGAAATTGCTCCGGAGTATTGTCGGAGGTTGCCGGAATCGCAAGTCAT
                      ____________________________________________________________
consensus             TTACTTTTTCTTAGAAATTGCTCCGGAGTATTGTCGGAGGTTGCCGGAATCGCAAGTCAT