Contig 005645:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF014B01Sequence466005645 (4)gb|KJB66367.1|1e-94hypothetical protein B456_010G137900 [Gossypium raimondii]790005645 (4)ref|XP_010097171.1|5e-84hypothetical protein L484_025717 [Morus notabilis] gb|EXB67238.1| hypothetical p
JMSF022K18Sequence784005645 (4)ref|XP_002268800.2|3e-99PREDICTED: COBW domain-containing protein 1 [Vitis vinifera] emb|CBI36422.3| unn
JMSF023E02Sequence783005645 (4)ref|XP_002268800.2|1e-95PREDICTED: COBW domain-containing protein 1 [Vitis vinifera] emb|CBI36422.3| unn

Alignment

This contig is upended


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JMSF014B01-            GTGAAGTGGATATTGATGGTTCTTTGGTTGCTGCAAAAACTGCTGGGGCTGAGGACATT
                      ____________________________________________________________
consensus              GTGAAGTGGATATTGATGGTTCTTTGGTTGCTGCAAAAACTGCTGGGGCTGAGGACATT
 
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JMSF014B01-           ATGATGCTTAACAATGGATGTATATGTTGCACTGTCAGGGGTGATCTTGTTAGAATGATT
                      ____________________________________________________________
consensus             ATGATGCTTAACAATGGATGTATATGTTGCACTGTCAGGGGTGATCTTGTTAGAATGATT
 
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JMSF014B01-           GCAGAATTAGTCAGTAAGAAGAAAGGAAAATTCGATCATATTGTAATAGAGACAACAGGA
                      ____________________________________________________________
consensus             GCAGAATTAGTCAGTAAGAAGAAAGGAAAATTCGATCATATTGTAATAGAGACAACAGGA
 
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JMSF014B01-           TTGGCGAATCCAGCACCAATTATTCAGACTTTCTATGCTGAGGATCAAGTTTTTAATGAT
                      ____________________________________________________________
consensus             TTGGCGAATCCAGCACCAATTATTCAGACTTTCTATGCTGAGGATCAAGTTTTTAATGAT
 
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JMSF014B01-           GTTAAACTAGATGGCGTTGTCACATTAGTTGATGCCAAACATGCTGGTCTTCACCTGGAT
rJMSF023E02+                                                                  GGAT
rJMSF022K18+                                                                  GGAT
rJMSF014B01+                                                                  GGAT
                      ____________________________________________________________
consensus             GTTAAACTAGATGGCGTTGTCACATTAGTTGATGCCAAACATGCTGGTCTTCACCTGGAT
 
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JMSF014B01-           GAGGTGAAGCCAAAGGGAGTGGTCAATGAAGCAGTTGAGCAAATTGCGTATGCTGACCGT
rJMSF023E02+          GAGGTGNAGCCAAAGGGAGTGGTCAATGAAGCAGNTGAGCAAATNGCGTATGCTGACCGT
rJMSF022K18+          GAGGTGAAGCCAAAGGGAGTGGTCAATGAAGCAGTTGAGCAAATTGCGTATGCTGACCGT
rJMSF014B01+          GAGGTGAAGCCAAAGGGAGTGGTCAATGAAGCAGTTGAGCAAATTGCGTATGCTGACCGT
                      ____________________________________________________________
consensus             GAGGTGAAGCCAAAGGGAGTGGTCAATGAAGCAGTTGAGCAAATTGCGTATGCTGACCGT
 
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JMSF014B01-           ATCATAGTGAACAAGACTGATCTGGTTGGTGAGGCAGATGTGTCTTCCTTGATTGATCGC
rJMSF023E02+          ATCATAGTGAACAAGACTGATCTGGTTGGTGAGGCAGATGTGTCTTCCTTGATTGATCGC
rJMSF022K18+          ATCATAGTGAACAAGACTGATCTGGTTGGTGAGGCAGATGTGTCTTCCTTGATTGATCGC
rJMSF014B01+          ATCATAGTGAACAAGACTGATCTGGTTGGTGAGGCAGATGTGTCTTCCTTGATTGATCGC
                      ____________________________________________________________
consensus             ATCATAGTGAACAAGACTGATCTGGTTGGTGAGGCAGATGTGTCTTCCTTGATTGATCGC
 
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JMSF014B01-           ATCAAGAGAATAAACCAAATGGCACACATGAAGAAGACTCAGTATGG             
rJMSF023E02+          ATCAAGAGAATAAANCAAATGGCACACATGAAGAAGACTCAGTATGGAAAAGTTGATTTA
rJMSF022K18+          ATCAAGAGAATAAACCAAATGGCACACATGAAGAAGACTCAGTATGGAAAAGTTGATTTA
rJMSF014B01+          ATCAAGAGAATAAACCAAATGGCACACATGAAGAAGACTCAGTATGGAAAAGTTGATTTA
                      ____________________________________________________________
consensus             ATCAAGAGAATAAACCAAATGGCACACATGAAGAAGACTCAGTATGGAAAAGTTGATTTA
 
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rJMSF023E02+          GATTATGTTCTTGGTATTGGAGGTTTTGATTTGGAAAGAATTGAAACTGCTGTTGATACT
rJMSF022K18+          GATTATGTTCTTGGTATTGGAGGTTTTGATTTGGAAAGAATTGAAACTGCTGTTGATACT
rJMSF014B01+          GATTATGTTCTTGGTATTGGAGGTTTTGATTTGGAAAGAATTGAAACTGCTGTTGATACT
                      ____________________________________________________________
consensus             GATTATGTTCTTGGTATTGGAGGTTTTGATTTGGAAAGAATTGAAACTGCTGTTGATACT
 
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rJMSF023E02+          GAAAGTTCCAAGGAAGACCATGATCACCATCATGACCATGACCATGAACACGACCACCAT
rJMSF022K18+          GAAAGTTCCAAGGAAGACCATGATCACCATCATGACCATGACCATGAACACGACCACCAT
rJMSF014B01+          GAAAGTTCCAAGGAAGACCATGATCACCATCATGACCATGACCATGAACACGACCACCAT
                      ____________________________________________________________
consensus             GAAAGTTCCAAGGAAGACCATGATCACCATCATGACCATGACCATGAACACGACCACCAT
 
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rJMSF023E02+          CATGACCATGAACACGACCACCATCATGACCATGAACATCATGATCATCACCATTCTCAC
rJMSF022K18+          CATGACCATGAACACGACCACCATCATGACCATGAACATCATGATCATCACCATTCTCAC
rJMSF014B01+          CATGACCATGAACACGACCACCATCATGACCATGAACATCATGATCATCACCATTCTCAC
                      ____________________________________________________________
consensus             CATGACCATGAACACGACCACCATCATGACCATGAACATCATGATCATCACCATTCTCAC
 
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rJMSF023E02+          GATCATACTCATGATCCTGGTGTTTCGTCTGTCAGCATTGTTTGTGAAGGGATCTTGGAT
rJMSF022K18+          GATCATACTCATGATCCTGGTGTTTCGTCTGTCAGCATTGTTTGTGAAGGGATCTTGGAT
rJMSF014B01+          GATCATACTCATGATCCTGGTGTTTCGTCTGTCAGCATTGTTTGTGAAGGGATCTTGGAT
                      ____________________________________________________________
consensus             GATCATACTCATGATCCTGGTGTTTCGTCTGTCAGCATTGTTTGTGAAGGGATCTTGGAT
 
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rJMSF023E02+          CTTGAGAAGGCTAACATTTGGCTGGGAACTTTGTTGATGGAAAGGAGTGAAGACATATAT
rJMSF022K18+          CTTGAGAAGGCTAACATTTGGCTGGGAACTTTGTTGATGGAAAGGAGTGAAGACATATAT
rJMSF014B01+          CTTGAGAAGGCTAACATTTGGCTGGGAACTTTGTTGATGGAAAGGAGTGAATACATATAT
                      ____________________________________________________________
consensus             CTTGAGAAGGCTAACATTTGGCTGGGAACTTTGTTGATGGAAAGGAGTGAAGACATATAT
 
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rJMSF023E02+          CGGATGAAAGGCCTTTTGTCTGTTCAGGGAATGGACGAAAGATTCGTCTTTCAGGGAGTG
rJMSF022K18+          CGGATGAAAGGCCTTTTGTCTGTTCAGGGAATGGACGAAAGATTCGTCTTTCAGGGAGTG
rJMSF014B01+          CGGATGAAAGGCCTTTTGTCTGTTCAGGGAATGGACGAAAGATTCGTCTTTCAGGGAGTG
                      ____________________________________________________________
consensus             CGGATGAAAGGCCTTTTGTCTGTTCAGGGAATGGACGAAAGATTCGTCTTTCAGGGAGTG
 
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rJMSF023E02+          CATGACATATTCCAAGGTTCCCCAGACAGGCCATGGCTTCCTGATGAAGCAAGGATTAAC
rJMSF022K18+          CATGACATATTCCAAGGTTCCCCAGACAGGCCATGGCTTCCTGATGAAGCAAGGATTAAC
rJMSF014B01+          CATGACATATTCCAAGGTTCCCCAGACAGGCCATGGCTTCCTGATGAAGCAAGGATTAAC
                      ____________________________________________________________
consensus             CATGACATATTCCAAGGTTCCCCAGACAGGCCATGGCTTCCTGATGAAGCAAGGATTAAC
 
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rJMSF023E02+          AAGGTTGTTTTCATTGGAAAGAACTTGGACTCAAAAGAGCTAGAGCAGGGTTTCAAGGCT
rJMSF022K18+          AAGGTTGTTTTCATTGGAAAGAACTTGGACTCAAAAGAGCTAGAGCAGGGTTTCAAGGCT
rJMSF014B01+          -ATGTTGTTTTCATTGGAAAGAACTTGGACTCAAAAGAGCTAGAGCAGGGTTTCAAGGCT
                      ____________________________________________________________
consensus             AAGGTTGTTTTCATTGGAAAGAACTTGGACTCAAAAGAGCTAGAGCAGGGTTTCAAGGCT
 
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rJMSF023E02+          TGCCTGCTATAATGTAATTCCATTTGCTAATTCTCAAAAGGCAAATGAAAAGTAAAGCCA
rJMSF022K18+          TGCCTGCTATAATGTAATTCCATTTGCTAATTCTCAAAAGGCAAATGAAAAGTAAAGCCA
rJMSF014B01+          TGCCTGCTATAATGTAATTCCATTTGCTAATTCTCAAAAGGCAAATGAAAAGTAAAGCCA
                      ____________________________________________________________
consensus             TGCCTGCTATAATGTAATTCCATTTGCTAATTCTCAAAAGGCAAATGAAAAGTAAAGCCA
 
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rJMSF023E02+          TTTTTAACAATGGGACTTTGACCTTTGATCCACCATGTATAAGAC               
rJMSF022K18+          TTTTTAACAATGGGACTTTGACCTTTGATCCACCATGTATAAGAC               
rJMSF014B01+          TTTTTAACAATGGGACTTTGACCTTTGATCCACCATGTATAAGACCAGTCACAAAAGTTT
                      ____________________________________________________________
consensus             TTTTTAACAATGGGACTTTGACCTTTGATCCACCATGTATAAGACCAGTCACAAAAGTTT