Contig 005642:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF012A12Sequence496016262ref|XP_004983205.1|87.4PREDICTED: chlorophyllase-2, chloroplastic-like [Setaria italica]585005642 (3)ref|XP_010034594.1|152PREDICTED: chlorophyllase-2, chloroplastic-like [Eucalyptus grandis]
JMSF013G11Sequence440007551 (32)ref|XP_009789240.1|1e-32PREDICTED: probable calcium-binding protein CML36 [Nicotiana sylvestris]739005642 (3)ref|XP_007222997.1|1e-64hypothetical protein PRUPE_ppa010004mg [Prunus persica] gb|EMJ24196.1| hypotheti
JMSF022N02Sequence712005642 (3)ref|XP_007222997.1|7e-66hypothetical protein PRUPE_ppa010004mg [Prunus persica] gb|EMJ24196.1| hypotheti

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF022N02+ ACTAGCGTTATCCGGACACAGCCGGG
rJMSF013G11+ TTATCCGGACACAGCCGGG
                      ____________________________________________________________
consensus ACTAGCGTTATCCGGACACAGCCGGG
 
. : . : . : . : . : . :
rJMSF022N02+ GAGGGAAAGTAGCATTCGCGCTAGCTCTGGGCAAGACGGCGACGGCTGATCTGAAATTCT
rJMSF013G11+ GAGGGAAAGTAGCATTCGCGCTAGCTCTGGGCAAGACGGCGACGGCTGATCTGAAATTCT
                      ____________________________________________________________
consensus GAGGGAAAGTAGCATTCGCGCTAGCTCTGGGCAAGACGGCGACGGCTGATCTGAAATTCT
 
. : . : . : . : . : . :
rJMSF022N02+ CAGCCATAATCGGCGTGGACCCCGTCGGCGGAACATGCCCTGATGTCCTCAACTCCACTC
rJMSF013G11+ CAGCCATAATCGGCGTGGACCCCGTCGGCGGAACATGCCCTGATGTCCTCAACTCCACTC
                      ____________________________________________________________
consensus CAGCCATAATCGGCGTGGACCCCGTCGGCGGAACATGCCCTGATGTCCTCAACTCCACTC
 
. : . : . : . : . : . :
rJMSF022N02+ CTGATTACTTCGACCTTAACATGCCAGCAATGGTGATCGGGTCGGGCTTGGGAGATGTCA
rJMFF012A12+ TTAACATGCCAGCAATGGTGATCGGGTCGGGCTTGGGAGATGTCA
rJMSF013G11+ CTGATTACTTCGACCTTAACATGCCAGCAATGGTGATCGGGTCGGGCTTGGGAGATGTCA
                      ____________________________________________________________
consensus CTGATTACTTCGACCTTAACATGCCAGCAATGGTGATCGGGTCGGGCTTGGGAGATGTCA
 
. : . : . : . : . : . :
rJMSF022N02+ AGAAGAATCTTTTGAGCTGCCCTTGCGCGCCCAAGGGGTCGAACTATGCCGCTTTCTACA
rJMFF012A12+ AGAAGAATCTTTTGAGCTGCCCTTGCGCGCCCAAGGGGTCGAACTATGCCGCTTTNTACA
rJMSF013G11+ AGAAGAATCTTTTGAGCTGCCCTTGCGCGCCCAAGGGGTCGAACTATGCCGCTTTCTACA
                      ____________________________________________________________
consensus AGAAGAATCTTTTGAGCTGCCCTTGCGCGCCCAAGGGGTCGAACTATGCCGCTTTCTACA
 
. : . : . : . : . : . :
rJMSF022N02+ GCAAGTGTCGCGCGCCGGCTTGTTGCTTGGTGGCTAAAGACTACGGACACACTGACATGC
rJMFF012A12+ GCAAGTGTCGCGCGCCGGCTTGTTGCTTGGTGGCTAAAGANTACGGACACACTGACATGC
rJMSF013G11+ GCAAGTGTCGCGCGCCGGCTTGTTGCTTGGTGGCTAAAGACTACGGACACACTGACATGC
                      ____________________________________________________________
consensus GCAAGTGTCGCGCGCCGGCTTGTTGCTTGGTGGCTAAAGACTACGGACACACTGACATGC
 
. : . : . : . : . : . :
rJMSF022N02+ TGGACGATGATACGAGAGGGAGTTTGCGTGGGATGCTGACTTATTGTATGTGCAAGAACG
rJMFF012A12+ TGGACGATGATACGAGAGGGAGTTTGCGTGGGATGCTGACTTATTGTATGTGCAAGAACG
rJMSF013G11+ TGGACGATGATACGAGAGGGAGTTTGCGTGGGATGCTGACTTATTGTATGTGCAAGAACG
                      ____________________________________________________________
consensus TGGACGATGATACGAGAGGGAGTTTGCGTGGGATGCTGACTTATTGTATGTGCAAGAACG
 
. : . : . : . : . : . :
rJMSF022N02+ GGCCGGCTAGGGCGCCGATGCGGGCGTTTGTGGGCGGCGCTGTGGTGGCGTTCTTGAGAG
rJMFF012A12+ GGCCGGCTAGGGCGCCGATGCGGGCGTTTGTGGGCGGCGCTGTGGTGGCGTTCTTGAGAG
rJMSF013G11+ GGCCGGCTAGGGCGCCGATGCGGGCGTTTGTGGGCGGCGCTGTGGTGGCGTTCTTGAGAG
                      ____________________________________________________________
consensus GGCCGGCTAGGGCGCCGATGCGGGCGTTTGTGGGCGGCGCTGTGGTGGCGTTCTTGAGAG
 
. : . : . : . : . : . :
rJMSF022N02+ GGTTTTTGGAGAGTGACATGAATCCTTTGATGGGTATTATAGACCAGACTGAAACTGCAC
rJMFF012A12+ GGTTTTTGGAGAGTGACATGAATCCTTTGATGGGTATTATAGACCAGACTGAAACTGCAC
rJMSF013G11+ GGTTTTTGGAGAGTGACATGAATCCTTTGATGGGTATTATAGACCAGACTGAAACTGCAC
                      ____________________________________________________________
consensus GGTTTTTGGAGAGTGACATGAATCCTTTGATGGGTATTATAGACCAGACTGAAACTGCAC
 
. : . : . : . : . : . :
rJMSF022N02+ CTGTTGAGCTTCAACCAGTGGATTCCAAAGATTTGGTGAGGGCCTAAGTTGCATGTTATT
rJMFF012A12+ CTGTTGAGCTTCAACCAGTGGATTCCAAAGATTTGGTGAGGGCCTAAGTTGCATGTTATT
rJMSF013G11+ CTGTTGAGCTTCAACCAGTGGATTCCAAAGATTTGGTGAGGGCCTAAGTTGCATGTTATT
                      ____________________________________________________________
consensus CTGTTGAGCTTCAACCAGTGGATTCCAAAGATTTGGTGAGGGCCTAAGTTGCATGTTATT
 
. : . : . : . : . : . :
rJMSF022N02+ GCAAATGAATGGAATTGAAGGTTGTGTGTCAACTGTCAAGAAAGTATGGTAGGTACTAGG
rJMFF012A12+ GCAAATGAATGGAATTGAAGGTTGTGTGTCAACTGTCAAGAAAGTATGGTAGGTANTAGG
rJMSF013G11+ GCAAATGAATGGAATTGAAGGTTGTGTGTCAACTGTCAAGAAAGTATGGTAGGTACTAGG
                      ____________________________________________________________
consensus GCAAATGAATGGAATTGAAGGTTGTGTGTCAACTGTCAAGAAAGTATGGTAGGTACTAGG
 
. : . : . : . : . : . :
rJMSF022N02+ TAGTAGTAAATGTAGTCAGTATTTGGGAGAAGGGAGTCGAAATGGGATCGTTATATCGTG
rJMFF012A12+ TAGTAGTAAATGTAGTCAGTATTTGGGAGAAGGGAGTCGAAATGGGATCGTTATATCGTG
rJMSF013G11+ TAGTAGTAAATGTAGTCAGTATTTGGGAGAAGGGAGTCGAAATGGGATCGTTATATCGTG
                      ____________________________________________________________
consensus TAGTAGTAAATGTAGTCAGTATTTGGGAGAAGGGAGTCGAAATGGGATCGTTATATCGTG
 
. : . : . : . : . : . :
rJMSF022N02+ TNCCCTGTCCAAAACGATGTCATTTT
rJMFF012A12+ TGCCCTGTCCAAAACGATGTCATTTTTANGTTGA-GTTTAGATGTATTATGTTAAGAGT
rJMSF013G11+ TGCCCTGTCCAAAACGATGTCATTTTTAGGTTGACGTTTAGATGTATTATGTTAAGAGTT
                      ____________________________________________________________
consensus TGCCCTGTCCAAAACGATGTCATTTTTAGGTTGACGTTTAGATGTATTATGTTAAGAGTT