Contig 005641:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF013B11Sequence501003601 (2)gb|KDO36325.1|7e-33hypothetical protein CISIN_1g046287mg, partial [Citrus sinensis]727005641 (2)ref|XP_009598779.1|5e-111PREDICTED: asparagine synthetase [glutamine-hydrolyzing] 2-like, partial [Nicot
JMSF023A19Sequence391003601 (2)gb|KDO36325.1|2e-49hypothetical protein CISIN_1g046287mg, partial [Citrus sinensis]723005641 (2)ref|XP_009598779.1|6e-109PREDICTED: asparagine synthetase [glutamine-hydrolyzing] 2-like, partial [Nicot

Alignment

This contig is upended


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rJMSF023A19+                                                                 AGATA
rJMSF013B11+                                                               TTAGATA
                      ____________________________________________________________
consensus                                                                  TTAGATA
 
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rJMSF023A19+          AGGAATTCATCAACACTGCAATGAGTATTGATCCTGAATGGAAAATGGTAGGGCCCGATC
rJMSF013B11+          AGGAATTCATCAACACTGCAATGAGTATTGATCCTGAATGGAAAATGGTAAGGCCCGATC
                      ____________________________________________________________
consensus             AGGAATTCATCAACACTGCAATGAGTATTGATCCTGAATGGAAAATGGTAGGGCCCGATC
 
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rJMSF023A19+          TTGGAAGAATTGAGAAGTGGGTTCTGCGCAATGCTTTTGATGATGAGCAAGAACCTTATC
rJMSF013B11+          TTGGAAGAATTGAGAAGTGGGTTCTGCGCAATGCTTTTGATGATGAGCAAGAACCTTATC
                      ____________________________________________________________
consensus             TTGGAAGAATTGAGAAGTGGGTTCTGCGCAATGCTTTTGATGATGAGCAAGAACCTTATC
 
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rJMSF023A19+          TGCCAAAGCATATTTTGTACAGGCAAAAGGAGCAGTTCAGTGATGGAGTTGGGTATAGTT
rJMSF013B11+          TGCCAAAGCATATTTTGTACAGGCAAAAGGAGCAGTTCAGTGATGGAGTTGGGTATAGTT
                      ____________________________________________________________
consensus             TGCCAAAGCATATTTTGTACAGGCAAAAGGAGCAGTTCAGTGATGGAGTTGGGTATAGTT
 
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rJMSF023A19+          GGATTGATGGCTTGAAGGATCATGCAAATGGACTGGTTTCTGACTCAATGTTGGCAAATG
rJMSF013B11+          GGATTGATGGCTTGAAGGATCATGCAAATGGACTGGTTTCTGACTCAATGTTGGCAAATG
                      ____________________________________________________________
consensus             GGATTGATGGCTTGAAGGATCATGCAAATGGACTGGTTTCTGACTCAATGTTGGCAAATG
 
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rJMSF023A19+          CAAGCTTCGTTTACCCAGAGAACACCCCAACAACGAAAGAAGGATACTATTATAGGACAA
rJMSF013B11+          CAAGCTTCGTTTACCCAGAGAACACCCCAACAACGAAAGAAGGATACTATTATAGGACAA
                      ____________________________________________________________
consensus             CAAGCTTCGTTTACCCAGAGAACACCCCAACAACGAAAGAAGGATACTATTATAGGACAA
 
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rJMSF023A19+          TCTTCGAGAAATTCTTCCCCAAGAACGCTGCAAGGTCAACAGTTCCCGGGGGGCCAAGCG
rJMSF013B11+          TCTTCGAGAAATTCTTCCCCAAGAACGCTGCAAGGTCAACAGTTCCCGGGGGGCCAAGCG
                      ____________________________________________________________
consensus             TCTTCGAGAAATTCTTCCCCAAGAACGCTGCAAGGTCAACAGTTCCCGGGGGGCCAAGCG
 
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rJMSF023A19+          TGGCATGCAGCACTGCAAGAGCTGTAGAATGGGATGCGTCCTGGTCAAAGAATCTAGATC
rJMSF013B11+          TGGCATGCAGCACTGCAAGAGCTGTAGAATGGGATGCGTCCTGGTCAAAGAATCTAGATC
                      ____________________________________________________________
consensus             TGGCATGCAGCACTGCAAGAGCTGTAGAATGGGATGCGTCCTGGTCAAAGAATCTAGATC
 
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rJMSF023A19+          CGTCTGGCAGAGCAGCACTCGGGATTCATGCAGCAGCGTATGAAGATGCCCCGGATGCAA
rJMSF013B11+          CGTCTGGCAGAGCAGCACTCGGGATTCATGCAGCAGCGTATGAAGATGCCCCGGATGCAA
                      ____________________________________________________________
consensus             CGTCTGGCAGAGCAGCACTCGGGATTCATGCAGCAGCGTATGAAGATGCCCCGGATGCAA
 
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rJMSF023A19+          AGACGACCACTTCATCTGAAACCTCAGTTCAGAAACTGGAAGTAGAGAAGGCTAGTGTTG
rJMSF013B11+          AGACGACCACTTCATCTGAAACCTCAGTTCAGAAACTGGAAGTAGAGAAGGCTAGTGTTG
                      ____________________________________________________________
consensus             AGACGACCACTTCATCTGAAACCTCAGTTCAGAAACTGGAAGTAGAGAAGGCTAGTGTTG
 
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rJMSF023A19+          CAGTTTGATCGTGTATTTAGTCGCGAAGGTATCAATTTCTTTGG-TTTGCAGAATTTAAA
rJMSF013B11+          CAGTTTGATCGTGTATTTAGTCGCGAAGGTATCAATTTCTTTGGTTTTGCAGAATTTAAA
                      ____________________________________________________________
consensus             CAGTTTGATCGTGTATTTAGTCGCGAAGGTATCAATTTCTTTGGTTTTGCAGAATTTAAA
 
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rJMSF023A19+          AGAGCAATAGCATATCGCACTGCAAGTTTGATTGTGTATTTTATGTCACTGGTACACTGT
rJMSF013B11+          AGAGCAATAGCATATCGCACTGCAAGTTTGATTGTGTATTTTATGTCACTGGTACACTGT
                      ____________________________________________________________
consensus             AGAGCAATAGCATATCGCACTGCAAGTTTGATTGTGTATTTTATGTCACTGGTACACTGT
 
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rJMSF023A19+          TAAAACAAACATTAGCTCTGCAAGTTTGATTGTGTATTTTATATCACTGGTACTGTGAA 
rJMSF013B11+          TAAAACAAACATTAGCTCTGCAAGTTTGATTGTGTATTTTATATCACTGGTACTGTGAAC
                      ____________________________________________________________
consensus             TAAAACAAACATTAGCTCTGCAAGTTTGATTGTGTATTTTATATCACTGGTACTGTGAAC