Contig 005638:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF012K02+                                                                 TTTTTA
rJMSF012K02-                         ATAACAACAGGTACAACAGCAACAAAGAGCATTTGATGATTTTTA
                      ____________________________________________________________
consensus                            ATAACAACAGGTACAACAGCAACAAAGAGCATTTGATGATTTTTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF012K02+           TAATTACACTAATTAAGGTATATATATATTAACCTTAATTGTATTAGTTGGCTTCTGCAA
rJMSF012K02-          TAATTACACTAATTAAGGTATATATATATTAACCTTAATTGTATTAGTTGGCTTCTGCAA
                      ____________________________________________________________
consensus             TAATTACACTAATTAAGGTATATATATATTAACCTTAATTGTATTAGTTGGCTTCTGCAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF012K02+           ACTCTTCTCTCTAAGCACATAGCCACTCAGATCAACTTCTTCATCCAAACCCTATCATTT
rJMSF012K02-          ACTCTTCTCTCTAAGCACATAGCCACTCAGATCAACTTCTTCATCCAAACCCTATCATTT
                      ____________________________________________________________
consensus             ACTCTTCTCTCTAAGCACATAGCCACTCAGATCAACTTCTTCATCCAAACCCTATCATTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF012K02+           TCTTGATGACAATATATTGATGCCCGTCCAATTCACTTGCCATATTTCTTCTCATTATGT
rJMSF012K02-          TCTTGATGACAATATATTGATGCCCGTCCAATTCACTTGCCATATTTCTTCTCATTATGT
                      ____________________________________________________________
consensus             TCTTGATGACAATATATTGATGCCCGTCCAATTCACTTGCCATATTTCTTCTCATTATGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF012K02+           CCATGATGACTAGAATTGAAACGACGTTTGTGACGCGCCACCATGCTTTGTTGGTGATGA
rJMSF012K02-          CCATGATGACTAGAATTGAAACGACGTTTGTGACGCGCCACCATGCTTTGTTGGTGATGA
                      ____________________________________________________________
consensus             CCATGATGACTAGAATTGAAACGACGTTTGTGACGCGCCACCATGCTTTGTTGGTGATGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF012K02+           ATGATGTTGCGGTGGCGGCGGCGGCCGCCTGATCTCTTGGGAGGAGGGACAGTGGTGTGG
rJMSF012K02-          ATGATGTTGCGGTGGCGGCGGCGGCCGCCTGATCTCTTGGGAGGAGGGACAGTGGTGTGG
                      ____________________________________________________________
consensus             ATGATGTTGCGGTGGCGGCGGCGGCCGCCTGATCTCTTGGGAGGAGGGACAGTGGTGTGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF012K02+           GTTTCCGGGCCACGGTAGTCAATATCATAAACCACCGGACTACTACCTGATCCGTGGTCG
rJMSF012K02-          GTTTCCGGGCCACGGTAGTCAATATCATAAACCACCGGACTACTACCTGATCCGTGGTCG
                      ____________________________________________________________
consensus             GTTTCCGGGCCACGGTAGTCAATATCATAAACCACCGGACTACTACCTGATCCGTGGTCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF012K02+           GAGAAACAAGGCCCGACGAGGAAGAGGAAGAGGAGGAGAAAGAGTGCGCAGGTTGTCTTC
rJMSF012K02-          GAGAAACAAGGCCCGACGAGGAAGAGGAAGAGGAGGAGAAAGAGTGCGCAGGTTGTCTTC
                      ____________________________________________________________
consensus             GAGAAACAAGGCCCGACGAGGAAGAGGAAGAGGAGGAGAAAGAGTGCGCAGGTTGTCTTC