Contig 005632:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF011E20Sequence288006759 (5)803005632 (3)ref|XP_009786623.1|338PREDICTED: uncharacterized protein LOC104234713 [Nicotiana sylvestris] ref|XP_00
JMSF039O20Sequence670006759 (5)emb|CDP16208.1|5e-37unnamed protein product [Coffea canephora]813005632 (3)ref|XP_009786623.1|366PREDICTED: uncharacterized protein LOC104234713 [Nicotiana sylvestris] ref|XP_00
JMSF052I20Sequence196006759 (5)647005632 (3)ref|XP_009619401.1|315PREDICTED: uncharacterized protein LOC104111412 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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rJMSF039O20+                         GNAACATCAAGCAGCCTATTTTCAGTTGCAAGTTTAGTCAAGATC
                      ____________________________________________________________
consensus                            GNAACATCAAGCAGCCTATTTTCAGTTGCAAGTTTAGTCAAGATC
 
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rJMSF039O20+          GGGTACAACAGGTGGATCCGCTAAGCAACTTTTCGTCTAGTTTTGTTGATAGCTCTGATA
rJMSF052I20+                                                   TTTGTTGATAGCTCTGATA
rJMSF011E20+           GGTACAACAGGTGGATCCGCTAAGCAACTTTTCGTCTAG-TTTGTTGATAGCTCTGATA
                      ____________________________________________________________
consensus             GGGTACAACAGGTGGATCCGCTAAGCAACTTTTCGTCTAGTTTTGTTGATAGCTCTGATA
 
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rJMSF039O20+          TTGAAATAGAAAGGCGGGAGAGGAAGGGATGGAAGGTGAAGATACATGACCTCTCTGGCT
rJMSF052I20+          TNGAAATAGAAAGGCGGGAGAGGAAGGGATGGAAGGTGAAGATACATGACCTCTCTGGCT
rJMSF011E20+          TTGAAATAGAAAGGCGGGAGAGGAAGGGATGGAAGGTGAAGATACATGACCTCTCTGGCT
                      ____________________________________________________________
consensus             TTGAAATAGAAAGGCGGGAGAGGAAGGGATGGAAGGTGAAGATACATGACCTCTCTGGCT
 
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rJMSF039O20+          CGGCTGTGGCAGCTGCGTTCATCACTACGCCATTCGTGCCATCGACCGGTTGTGATTGGG
rJMSF052I20+          CGGCTGTGGCAGCTGCGTTCATCNCTACGCCATTCGTGCCATCGACCGGTTGTGATTGGG
rJMSF011E20+          CGGCTGTGGCAGCTGCGTTCATCACTACGCCATTCGTGCCATCGACCGGTTGTGATTGGG
                      ____________________________________________________________
consensus             CGGCTGTGGCAGCTGCGTTCATCACTACGCCATTCGTGCCATCGACCGGTTGTGATTGGG
 
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rJMSF039O20+          TTGACAGGTCCAACCCGGGAGCTTGGTTGATCGTACGCCCCGATCCTTGCATGCGCGAGA
rJMSF052I20+          TTGACAGGTCCAACCCGGGAGCTTGGTTGATCGTACGCCCCGATCCTTGCATGCGCGAGA
rJMSF011E20+          TTGACAGGTCCAACCCGGGAGCTTGGTTGATCGTACGCCCCGATCCTTGCATGCGCGAGA
                      ____________________________________________________________
consensus             TTGACAGGTCCAACCCGGGAGCTTGGTTGATCGTACGCCCCGATCCTTGCATGCGCGAGA
 
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rJMSF039O20+          GCTGGCAACCGTGGGGGAAGCTCGAAGCATGGCGTGAACGAGGCATCAGAGACTCCATCT
rJMSF052I20+          GCTGGCAACCGTGGGGGAAGCTCGAAGCATGGCGTGAACGAGGCATCAGAGACTCCATCT
rJMSF011E20+          GCTGGCAACCGTGGGGGAAGCTCGAAGCATGGCGTGAACGAGGCATCAGAGACTCCATCT
                      ____________________________________________________________
consensus             GCTGGCAACCGTGGGGGAAGCTCGAAGCATGGCGTGAACGAGGCATCAGAGACTCCATCT
 
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rJMSF039O20+          GCTGCCGCTTCCACCTCTTGTCGGATGGTCCAGAGGGGGGCGGGGATCTCCTCATGTCGG
rJMSF052I20+          GNTGCCGCTTCCACCTCTTNTCGGATGGTCCAGAGGGGGGCGGGGATCTCCTCATGTCGG
rJMSF011E20+          GCTGCCGCTTCCACCTCTTGTCGGATGGTCCAGAGGGGGGCGGGGATCTCCTCATGTCGG
                      ____________________________________________________________
consensus             GCTGCCGCTTCCACCTCTTGTCGGATGGTCCAGAGGGGGGCGGGGATCTCCTCATGTCGG
 
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rJMSF039O20+          AGATCCTCATCAGCGCGGAGAAGGGCGGGGAGTTCTACATCGACACTGACAAACAGGTCC
rJMSF052I20+          AGATCCTCATCAGCGCGGAGAAGGGCGGGGAGTTNTACATCGACACTGACAAACAGGTCC
rJMSF011E20+          AGATCCTCATCAGCGCGGAGAAGGGCGGGGAGTTCTACATCGACACTGACAAACAGGTCC
                      ____________________________________________________________
consensus             AGATCCTCATCAGCGCGGAGAAGGGCGGGGAGTTCTACATCGACACTGACAAACAGGTCC
 
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rJMSF039O20+          GAGCTGCAGCGAGTCCCGTGCCCAGTCCAAGAAGCAGCGGTGACTTTTCTGCGCTGAGTC
rJMSF052I20+          GAGCTGCAGCGAGTCCCGTGCCCAGTCCAAGAAGCAGCGGTGACTTTTCTGCGCTGAGTC
rJMSF011E20+          GAGCTGCAGCGAGTCCCGTGCCCAGTCCAAGAAGCAGCGGTGACTTTTCTGCGCTGAGTC
                      ____________________________________________________________
consensus             GAGCTGCAGCGAGTCCCGTGCCCAGTCCAAGAAGCAGCGGTGACTTTTCTGCGCTGAGTC
 
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rJMSF039O20+          CTGTTGTGGGCGGCTTCGTCATGAGCTGTAGAGTGCAAGGCGAAGGCAAGTACAGCAAGC
rJMSF052I20+          CTGTTGTGGGCGGNTTCGTCATGAGCTGTAGAGTGCAAGGCGAAGGCAAGTACAGCAAGC
rJMSF011E20+          CTGTTGTGGGCGGCTTCGTCATGAGCTGTAGAGTGCAAGGCGAAGGCAAGTACAGCAAGC
                      ____________________________________________________________
consensus             CTGTTGTGGGCGGCTTCGTCATGAGCTGTAGAGTGCAAGGCGAAGGCAAGTACAGCAAGC
 
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rJMSF039O20+          TCCTCGTGCAACTTGCCATGCGACACGTCACCTGCGTCGAGGATGCAGCCATTTTCATGG
rJMSF052I20+          TCCTCGTGCAACTTGCCATGCGACACGTCACCTGCGTCGAGGATGCAGCCATTTTCATGG
rJMSF011E20+          TCCTCGTGCAACTTGCCATGCGACACGTCACCTGCGTCGAGGATGCAGCCATTTTCATGG
                      ____________________________________________________________
consensus             TCCTCGTGCAACTTGCCATGCGACACGTCACCTGCGTCGAGGATGCAGCCATTTTCATGG
 
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rJMSF039O20+          CGCTCGCTGCAGCTGTGGATCTCAGTATCGAGGCGTGCAGGCCGTTCAGAAGGCTCAGGA
rJMSF052I20+          CGCTCGCTGCAGCTGTGGATCTCAGTATCGAGGCGTGCAGGCCGTTCAGAA         
rJMSF011E20+          CGCTCGCTGCAGCTGTGGATCTCAGTATCGAGGCGTGCAGGCCGTTCAGAAGGCTCAGGA
                      ____________________________________________________________
consensus             CGCTCGCTGCAGCTGTGGATCTCAGTATCGAGGCGTGCAGGCCGTTCAGAAGGCTCAGGA
 
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rJMSF039O20+          GAGGTACTCGCCATTCCTGGTGATATACATTAGTGTATAACTCTATAAATATGCATATAT
rJMSF011E20+          GAGGTACTCGCCATTCCTGGTGATATACATTAGTGTATAACTCTATAAATATGCATATAT
                      ____________________________________________________________
consensus             GAGGTACTCGCCATTCCTGGTGATATACATTAGTGTATAACTCTATAAATATGCATATAT
 
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rJMSF039O20+          GATGTTCATGTGTTTCCAGAAACTAAGGAAACCTCCCATGTACTCTCC            
rJMSF011E20+          GATGTTCATGTGTTTCCAGAAACTAAGGAAACCTCCCATGTACTCTCCTGTAACCAATGA
                      ____________________________________________________________
consensus             GATGTTCATGTGTTTCCAGAAACTAAGGAAACCTCCCATGTACTCTCCTGTAACCAATGA