Contig 005626:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMCP017A06Sequence631005626 (3)ref|XP_009801486.1|5e-113PREDICTED: protein unc-50 homolog [Nicotiana sylvestris]
JMSF010I01Sequence366006421 (2)ref|XP_010271213.1|6e-07PREDICTED: protein unc-50 homolog isoform X2 [Nelumbo nucifera]708005626 (3)ref|XP_009801486.1|2e-58PREDICTED: protein unc-50 homolog [Nicotiana sylvestris]
JMSF034C04Sequence656006421 (2)ref|XP_010271213.1|2e-19PREDICTED: protein unc-50 homolog isoform X2 [Nelumbo nucifera]691005626 (3)ref|XP_009801486.1|3e-87PREDICTED: protein unc-50 homolog [Nicotiana sylvestris]

Alignment

This contig is upended


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JMCP017A06-                            AACGCAGAGTCTGACCAAACGGAGTGGGGTTTCAAACAGTGAA
                      ____________________________________________________________
consensus                              AACGCAGAGTCTGACCAAACGGAGTGGGGTTTCAAACAGTGAA
 
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JMCP017A06-           GATCTCCGATCAATTAGAGCCGAAGAGGAAGAAGACGAGCACGAAGAAGGAGGAGCACCG
                      ____________________________________________________________
consensus             GATCTCCGATCAATTAGAGCCGAAGAGGAAGAAGACGAGCACGAAGAAGGAGGAGCACCG
 
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JMCP017A06-           GCAATATGCTTCCTACATCGTCACTGAAAGGGCGAACGAGCTCGCATGCTCGGCCCAATT
                      ____________________________________________________________
consensus             GCAATATGCTTCCTACATCGTCACTGAAAGGGCGAACGAGCTCGCATGCTCGGCCCAATT
 
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JMCP017A06-           CAGTTTTCCCTCAGTACCTCCGTAGAATAGTCAAGTGGCAACAAATGGATATCGAATATA
                      ____________________________________________________________
consensus             CAGTTTTCCCTCAGTACCTCCGTAGAATAGTCAAGTGGCAACAAATGGATATCGAATATA
 
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JMCP017A06-           CTTTCTGGCAAATGCTTCACTTATGTACCTCTCCAAAAGTGGTATATCAGCACACTAAGT
                      ____________________________________________________________
consensus             CTTTCTGGCAAATGCTTCACTTATGTACCTCTCCAAAAGTGGTATATCAGCACACTAAGT
 
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JMCP017A06-           ACCACAAACAAACAAAGAACCAATGGGCACGGGATGATCCTGCATTTATTGTTATATGCA
                      ____________________________________________________________
consensus             ACCACAAACAAACAAAGAACCAATGGGCACGGGATGATCCTGCATTTATTGTTATATGCA
 
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JMCP017A06-           GTCTTCTTTTAGCATGTTCTACTTTAGCTTACTGTGCTGCGTATGATCATAGTGCAGGGC
                      ____________________________________________________________
consensus             GTCTTCTTTTAGCATGTTCTACTTTAGCTTACTGTGCTGCGTATGATCATAGTGCAGGGC
 
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JMCP017A06-           ATACTGTTTTTGTGGTTATCTCTGTATTACTTTTTCATTTTTTAATAACCGGAGCTGTTT
rJMSF034C04+                                                TTTTTAGTAACCGGAGCTGTAT
                      ____________________________________________________________
consensus             ATACTGTTTTTGTGGTTATCTCTGTATTACTTTTTCATTTTTTAGTAACCGGAGCTGTTT
 
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JMCP017A06-           TGTCTACATGTTGTTGGTTCTTGACCAACAATTATCTTCGAGAGGAAACTCCAAACAGTC
rJMSF034C04+          NGGCTACATGTTGTTGGTTCTTGACAAACAATTATCTACGAGAGGAAGCTCCAAGCAGTC
                      ____________________________________________________________
consensus             TGTCTACATGTTGTTGGTTCTTGACCAACAATTATCTTCGAGAGGAAGCTCCAAGCAGTC
 
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JMCP017A06-           ATGTGGTGGAACAACGGGTTGAATGGTTATATGCTTTTGATGTCCACTGCAATTCTTTCT
rJMSF034C04+          ACGTGGTGGAACAACGGGTCGAATGGTTGTATGCATTTGATGTCCACTGCAACTCTTTCT
rJMSF010I01+                                  GGTTGTATGCATTTGATGTCCACTGCAACTCTTTCT
                      ____________________________________________________________
consensus             ATGTGGTGGAACAACGGGTTGAATGGTTGTATGCATTTGATGTCCACTGCAACTCTTTCT
 
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JMCP017A06-           TggCttTGTTCATCCTcgaTTATGTgGacgtaataaTTCaaTCCCC              
rJMSF034C04+          TCCCAATGTTCATCATGCTTTATGTCGTACATTATTTTCTTTCCCCTATCTTGGTTACTC
rJMSF010I01+          TCCCAATGTTCATCATGCTTTATGTCGTACATTATTTTCTTTCCCCTATCTTGGTTACTC
                      ____________________________________________________________
consensus             TCCCAATGTTCATCATGCTTTATGTCGTACATTATTTTCTTTCCCCTATCTTGGTTACTC
 
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rJMSF034C04+          ATGGTTTCATTCCCCTTCTACTATCAAATTTGCTCTTCATGATTGCTGCATCCTACTATC
rJMSF010I01+          ATGGTTTCATTCCCCTTCTACTATCAAATTTGCTCTTCATGATTGCTGCATCCTACTATC
                      ____________________________________________________________
consensus             ATGGTTTCATTCCCCTTCTACTATCAAATTTGCTCTTCATGATTGCTGCATCCTACTATC
 
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rJMSF034C04+          ATTACCTCAATTTTTTAGGTTACGATGTATTGCCCTTTTTGGAAAGGACCACGTTCTTCC
rJMSF010I01+          ATTACCTCAATTTTTTAGGTTACGATGTATTGCCCTTTTTGGAAAGGACCACGTTCTTCC
                      ____________________________________________________________
consensus             ATTACCTCAATTTTTTAGGTTACGATGTATTGCCCTTTTTGGAAAGGACCACGTTCTTCC
 
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rJMSF034C04+          TTTACCCAATCGGCATTGTCATCGTCCTTTCACCTATTTTTATTTTGACGGGCTTCAATC
rJMSF010I01+          TTTACCCAATCGGCATTGTCATCGTCCTTTCACCTATTTTTATTTTGACGGGCTTCAATC
                      ____________________________________________________________
consensus             TTTACCCAATCGGCATTGTCATCGTCCTTTCACCTATTTTTATTTTGACGGGCTTCAATC
 
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rJMSF034C04+          CATCAAGGTATTTCATGAACATTTACTTCAGCAGAGCGTTGTGATCGCAGCTTAGACTTG
rJMSF010I01+          CATCAAGGTATTTCATGAACATTTACTTCAGCAGAGCGTTGTGATCGCAGCTTAGACTTG
                      ____________________________________________________________
consensus             CATCAAGGTATTTCATGAACATTTACTTCAGCAGAGCGTTGTGATCGCAGCTTAGACTTG
 
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rJMSF034C04+          TTATAGGTACATATATTACTACATTAGATACCCCTTCAGATGCCATGAGCTGTAGGACAA
rJMSF010I01+          TTATAGGTAC--ATATTACTACCTTAGATACCCCTTCAGATGCCACGAGCTGTAGGACAA
                      ____________________________________________________________
consensus             TTATAGGTACATATATTACTACCTTAGATACCCCTTCAGATGCCATGAGCTGTAGGACAA
 
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rJMSF034C04+          CCGAGATGCAATCAATCGTTTACCGGTTTCATTAT                         
rJMSF010I01+          CCGAGATGCAATCAATCATTTACCGGTTTCATTATATGTTATAGGTACATATATTACTAC
                      ____________________________________________________________
consensus             CCGAGATGCAATCAATCGTTTACCGGTTTCATTATATGTTATAGGTACATATATTACTAC
 
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rJMSF010I01+          ATTAGATACCCCTTCAGATGCCATGAGCTGTAGGACAACCGAGATGCAATCAATCGTTTA
                      ____________________________________________________________
consensus             ATTAGATACCCCTTCAGATGCCATGAGCTGTAGGACAACCGAGATGCAATCAATCGTTTA
 
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rJMSF010I01+          CCGGTTTCATTATATCTTCAATGGAACAACGGCCGTGTTTATGGCATAGTTCTCTGGTAT
                      ____________________________________________________________
consensus             CCGGTTTCATTATATCTTCAATGGAACAACGGCCGTGTTTATGGCATAGTTCTCTGGTAT
 
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rJMSF010I01+          GGCCTTTTACAGTTAGGAATGATAATTGTAATTGAGGGGAGGTGTTAGTGTATTTGTATG
                      ____________________________________________________________
consensus             GGCCTTTTACAGTTAGGAATGATAATTGTAATTGAGGGGAGGTGTTAGTGTATTTGTATG