Contig 005624:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF016L19Sequence637005624 (10)ref|XP_007009089.1|3e-102Microsomal signal peptidase 25 kDa subunit (SPC25) [Theobroma cacao] gb|EOY1789791005624 (10)ref|XP_007009089.1|2e-101Microsomal signal peptidase 25 kDa subunit (SPC25) [Theobroma cacao] gb|EOY1789
JMFF038B03Sequence214005624 (10)ref|XP_007009089.1|5e-18Microsomal signal peptidase 25 kDa subunit (SPC25) [Theobroma cacao] gb|EOY1789742005624 (10)ref|XP_007009089.1|1e-101Microsomal signal peptidase 25 kDa subunit (SPC25) [Theobroma cacao] gb|EOY1789
JMFF039E09Sequence604005624 (10)ref|XP_007009089.1|2e-100Microsomal signal peptidase 25 kDa subunit (SPC25) [Theobroma cacao] gb|EOY1789726005624 (10)ref|XP_007009089.1|1e-101Microsomal signal peptidase 25 kDa subunit (SPC25) [Theobroma cacao] gb|EOY1789
JMFF040I15Sequence532005624 (10)ref|XP_007009089.1|1e-82Microsomal signal peptidase 25 kDa subunit (SPC25) [Theobroma cacao] gb|EOY1789776005624 (10)ref|XP_007009089.1|2e-80Microsomal signal peptidase 25 kDa subunit (SPC25) [Theobroma cacao] gb|EOY1789
JMSF010F16Sequence250005624 (10)ref|XP_007009089.1|1e-26Microsomal signal peptidase 25 kDa subunit (SPC25) [Theobroma cacao] gb|EOY1789722005624 (10)ref|XP_009590114.1|1e-06PREDICTED: probable signal peptidase complex subunit 2 [Nicotiana tomentosiform

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF039E09+                                           ATTGCACTGCGCAAAGCGTTCTCCGGA
JMFF016L19-                                            ATTGCACTGCGCAAAGCGTTCTCCGGA
JMFF039E09-                                            ATTGCACTGCGCAAAGCGTTCTCCGGA
JMFF040I15-                                               GCACTGCGCAAAGCGTTCTCCGGA
JMSF010F16-                                               GCACTGCGCAAAGCGTTCTCCGGA
rJMFF038B03+                                           ATTGCACTGCGCAAAGCGTTCTCCGGA
JMFF038B03-                                            ATTGCACTGCGCAAAGCGTTCTCCGGA
rJMFF016L19+                              TCGTCGAGANCCGATTGCACTGCGCAAAGCGTTCTCCGGA
                      ____________________________________________________________
consensus                                 TCGTCGAGANCCGATTGCACTGCGCAAAGCGTTCTCCGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF039E09+          CAAACCCTAGAAAAATGCAGGAGAAGAATGGGGATGCAGGGTCTAAGGGCAAGAAAGTCA
JMFF016L19-           CAAACCCTAGAAAAATGCAGGAGAAGAATGGGGATGCAGGGTCTAAGGGCAAGAAAGTCA
JMFF039E09-           CAAACCCTAGAAAAATGCAGGAGAAGAATGGGGATGCAGGGTCTAAGGGCAAGAAAGTCA
JMFF040I15-           CAAACCCTAGAAAAATGCAGGAGAAGAATGGGGATGCAGGGTCTAAGGGCAAGAAAGTCA
JMSF010F16-           CAAACCCTAGAAAAATGCAGGAGAAGAATGGGGATGCAGGGTCTAAGGGCAAGAAAGTCA
rJMFF038B03+          CAAACCCTAGAAAAATGCAGGAGAAGAATGGGGATGCAGGGTCTAAGGGCAAGAAAGTCA
JMFF038B03-           CAAACCCTAGAAAAATGCAGGAGAAGAATGGGGATGCAGGGTCTAAGGGCAAGAAAGTCA
rJMFF016L19+          CAAACCCTAGAAAAATGCAGGAGAAGAATGGGGATGCAGGGTCTAAGGGCAAGAAAGTCA
                      ____________________________________________________________
consensus             CAAACCCTAGAAAAATGCAGGAGAAGAATGGGGATGCAGGGTCTAAGGGCAAGAAAGTCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF039E09+          AAAAGACCAATCTGCTGGATCAACACTCTATCAAGCACCTCCTGGATGAGTCAGTTTCTG
JMFF016L19-           AAAAGACCAATCTGCTGGATCAACACTCTATCAAGCACCTCCTGGATGAGTCAGTTTCTG
JMFF039E09-           AAAAGACCAATCTGCTGGATCAACACTCTATCAAGCACCTCCTGGATGAGTCAGTTTCTG
JMFF040I15-           AAAAGACCAATCTGCTGGATCAACACTCTATCAAGCACCTCCTGGATGAGTCAGTTTCTG
JMSF010F16-           AAAAGACCAATCTGCTGGATCAACACTCTATCAAGCACCTCCTGGATGAGTCAGTTTCTG
rJMFF038B03+          AAAAGACCAATCTGCTGGATCAACACTCTATCAAGCACCTCCTGGATGAGTCAGTTTCTG
JMFF038B03-           AAAAGACCAATCTGCTGGATCAACACTCTATCAAGCACCTCCTGGATGAGTCAGTTTCTG
rJMFF016L19+          AAAAGACCAATCTGCTGGATCAACACTCTATCAAGCACCTCCTGGATGAGTCAGTTTCTG
                      ____________________________________________________________
consensus             AAAAGACCAATCTGCTGGATCAACACTCTATCAAGCACCTCCTGGATGAGTCAGTTTCTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF039E09+          AGATCGTCACAAGCAGGGGTTACGCTGAAGATTTCGCGATGAGTAACATTAGATTGTTGC
JMFF016L19-           AGATCGTCACAAGCAGGGGTTACGCTGAAGATTTCGCGATGAGTAACATTAGATTGTTGC
JMFF039E09-           AGATCGTCACAAGCAGGGGTTACGCTGAAGATTTCGCGATGAGTAACATTAGATTGTTGC
JMFF040I15-           AGATCGTCACAAGCAGGGGTTACGCTGAAGATTTCGCGATGAGTAACATTAGATTGTTGC
JMSF010F16-           AGATCGTCACAAGCAGGGGTTACGCTGAAGATTTCGCGATGAGTAACATTAGATTGTTGC
rJMFF038B03+          AGATCGTCACAAGCAGGGGTTACGCTGAAGATTTCGCGATGAGTAACATTAGATTGTTGC
JMFF038B03-           AGATCGTCACAAGCAGGGGTTACGCTGAAGATTTCGCGATGAGTAACATTAGATTGTTGC
rJMFF016L19+          AGATCGTCACAAGCAGGGGTTACGCTGAAGATTTCGCGATGAGTAACATTAGATTGTTGC
rJMFF040I15+                  ACAAGCAGGGGTTACGCTGAAGATTTCGCGATGAGTAACATTAGATTGTTGC
                      ____________________________________________________________
consensus             AGATCGTCACAAGCAGGGGTTACGCTGAAGATTTCGCGATGAGTAACATTAGATTGTTGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF039E09+          TTGGGACCGTCGTCATCGCGATCGCTCTCTTTGCTCAGTTCTACAATAAGAAATTTCCCG
JMFF016L19-           TTGGGACCGTCGTCATCGCGATCGCTCTCTTTGCTCAGTTCTACAATAAGAAATTTCCCG
JMFF039E09-           TTGGGACCGTCGTCATCGCGATCGCTCTCTTTGCTCAGTTCTACAATAAGAAATTTCCCG
JMFF040I15-           TTGGGACCGTCGTCATCGCGATCGCTCTCTTTGCTCAGTTCTACAATAAGAAATTTCCCT
JMSF010F16-           TTGGGACCGTCGTCATCGCGATCGCTCTCTTTGCTCAGTTCTAC                
rJMFF038B03+          TTGGGACCGTCGTCATCGCGATCGCTCTCTTTGCTCAGTTCTACAATAAGAAATTTCCCG
JMFF038B03-           TTGGGAC                                                     
rJMFF016L19+          TTGGGACCGTCGTCATCGCGATCGCTCTCTTTGCTCAGTTCTACAATAAGAAATTTCCCG
rJMFF040I15+          TTGGGACCGTCGTCATCGCGATCGCTCTCTTTGCTCAGTTCTACAATAAGAAATTTCCCT
                      ____________________________________________________________
consensus             TTGGGACCGTCGTCATCGCGATCGCTCTCTTTGCTCAGTTCTACAATAAGAAATTTCCCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF039E09+          AGAACAGGAATATTCTTATCGTCTGCATTTCGTTGTATATTATAGTGAGTGCACTTCTGC
JMFF016L19-           AGAACAGGAATATTCTTATCGTCTGCATTTCGTTGTATATTATAGTGAGTGCACTTCTGC
JMFF039E09-           AGAACAGGAATATTCTTATCGTCTGCATTTCGTTGTATATTATAGTGAGTGCACTTCTGC
JMFF040I15-           AGAACAGGAATATTCTTATCGTCTGCATTTCGTTGTATATTATAGTGAGTGCACTTCTGC
rJMFF038B03+          AGAACAGGAATATTCTTATCGTCTGCATTTCGTTGTATATTATAGTGAGTGCACTTCTGC
rJMFF016L19+          AGAACAGGAATATTCTTATCGTCTGCATTTCGTTGTATATTATAGTGAGTGCACTTCTGC
rJMFF040I15+          AGAACAGGAATATTCTTATCGTCTGCATTTCGTTGTATATTATAGTGAGTGCACTTCTGC
                      ____________________________________________________________
consensus             AGAACAGGAATATTCTTATCGTCTGCATTTCGTTGTATATTATAGTGAGTGCACTTCTGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF039E09+          TGCTGATTCCTTACACAAAGGAAAAGAATGCCATTTTGTTCACTTATCCACCAGCTGGAT
JMFF016L19-           TGCTGATTCCTTACACAAAGGAAAAGAATGCCATTTTGTTCACTTATCCACCAGCTGGAT
JMFF039E09-           TGCTGATTCCTTACACAAAGGAAAAGAATGCCATTTTGTTCACTTATCCACCAGCTGGAT
JMFF040I15-           TGCTGATTCCTTACACAAAGGAAAAGAATGCCATTTTGTTCACTTATCCACCAGCTGGAT
rJMFF038B03+          TGCTGATTCCTTACACAAAGGAAAAGAATGCCATTTTGTTCACTTATCCACCAGCTGGAT
rJMFF016L19+          TGCTGATTCCTTACACAAAGGAAAAGAATGCCATTTTGTTCACTTATCCACCAGCTGGAT
rJMFF040I15+          TGCTGATTCCTTACACAAAGGAAAAGAATGCCATTTTGTTCACTTATCCACCAGCTGGAT
                      ____________________________________________________________
consensus             TGCTGATTCCTTACACAAAGGAAAAGAATGCCATTTTGTTCACTTATCCACCAGCTGGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF039E09+          CTTTTAGCAGCACTGGCTTAGTCGTCTCTTCAAAGTTGCCTAGATTCTCAGATATGTACA
JMFF016L19-           CTTTTAGCAGCACTGGCTTAGTCGTCTCTTCAAAGTTGCCTAGATTCTCAGATATGTACA
JMFF039E09-           CTTTTAGCAGCACTGGCTTAGTCGTCTCTTCAAAGTTGCCTAGATTCTCAGATATGTACA
JMFF040I15-           CTTTTAGCAGCACTGGCTTAGTCGTCTCTTCAAAGTTGCCTAGATTCTCAGATATGTACA
rJMFF038B03+          CTTTTAGCAGCACTGGCTTAGTCGTCTCTTCAAAGTTGCCTAGATTCTCAGATATGTACA
rJMFF016L19+          CTTTTAGCAGCACTGGCTTAGTCGTCTCTTCAAAGTTGCCTAGATTCTCAGATATGTACA
rJMFF040I15+          CTTTTAGCAGCACTGGCTTAGTCGTCTCTTCAAAGTTGCCTAGATTCTCAGATATGTACA
                      ____________________________________________________________
consensus             CTTTTAGCAGCACTGGCTTAGTCGTCTCTTCAAAGTTGCCTAGATTCTCAGATATGTACA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF039E09+          CTCTCATGATAGCAAGTGCAGATCCCCAGTCAATCTCTGCAAAGCCACCGGTGGAGTTTA
JMFF016L19-           CTCTCATGATAGCAAGTGCAGATCCCCAGTCAATCTCTGCAAAGCCACCGGTGGAGTTTA
JMFF039E09-           CTCTCATGATAGCAAGTGCAGATCCCCAGTCAATCTCTGCAAAGCCACCGGTGGAGTTTA
JMFF040I15-           CTCTCATGATAGCAAGTGCAGATCCCCAGTCAATCTCTGCAAAGCCACCGGTGGAGTTTA
rJMFF038B03+          CTCTCATGATAGCAAGTGCAGATCCCCAGTCAATCTCTGCAAAGCCACCGGTGGAGTTTA
rJMFF016L19+          CTCTCATGATAGCAAGTGCAGATCCCCAGTCAATCTCTGCAAAGCCACCGGTGGAGTTTA
rJMFF040I15+          CTCTCATGATAGCAAGTGCAGATCCCCAGTCAATCTCTGCAAAGCCACCGGTGGAGTTTA
                      ____________________________________________________________
consensus             CTCTCATGATAGCAAGTGCAGATCCCCAGTCAATCTCTGCAAAGCCACCGGTGGAGTTTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF039E09+          CCAAGACTGTCACACAATGGTTTACGAAGGATGGAGTTCTCGCAGAGGGGCTCTTTTGGA
JMFF016L19-           CCAAGACTGTCACACAATGGTTTACGAAGGATGGAGTTCTCGCAGAGGGGCTCTTTTGGA
JMFF039E09-           CCAAGACTGTCACACAATGGTTTACGAAGGATGGAGTTCTCGCAGAGGGGCTCTTTTGGA
JMFF040I15-           CCAAGACTGTCACACAATGGTTTACGAA                                
rJMFF038B03+          CCAAGACTGTCACACAATGGTTTACGAAGGATGGAGTTCTCGCAGAGGGGCTCTTTTGGA
rJMFF016L19+          CCAAGACTGTCACACAATGGTTTACGAAGGATGGAGTTCTCGCAGAGGGGCTCTTTTGGA
rJMFF040I15+          CCAAGACTGTCACACAATGGTTTACGAAGGATGGAGTTCTCGCAGAGGGGCTCTTTTGGA
rJMSF010F16+                            GGTTTACGAAGGATGGAGTTCTCGCAGAGGGGCTCTTTTGGA
                      ____________________________________________________________
consensus             CCAAGACTGTCACACAATGGTTTACGAAGGATGGAGTTCTCGCAGAGGGGCTCTTTTGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF039E09+          AAGATGTCGAAGCGCTCATTAGCGATTATGCTAAAGAAAATAAAAAAGGCAAGTAAATGA
JMFF016L19-           AAGATGTCGAAGCGCTCATTAGCGATTATGCTAAAGAAAATAAAAAAGGCAAGTAAATGA
JMFF039E09-           AAGATGTCGAAGCGCTCATTAGCGATTATGCTAAAGA                       
rJMFF038B03+          AAGATGTCGAAGCGCTCATTAGCGATTATGCTAAAGAAAATAAAAAAGGCAAGTAAATGA
rJMFF016L19+          AAGATGTCGAAGCGCTCATTAGCGATTATGCTAAAGAAAATAAAAAAGGCAAGTAAATGA
rJMFF040I15+          AAGATGTCGAAGCGCTCATTAGCGATTATGCTAAAGAAAATAAAAAAGGCAAGTAAATGA
rJMSF010F16+          AAGATGTCGAAGCGCTCATTAGCGATTATGNTAAAGAAAATAAAAAAGGCAAGTAAATGA
                      ____________________________________________________________
consensus             AAGATGTCGAAGCGCTCATTAGCGATTATGCTAAAGAAAATAAAAAAGGCAAGTAAATGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF039E09+          GTAATGGGATCTTAAGAAAGGATCTGATAGAGTACTAGCAGCCAACAGTGTTCTGCTACA
JMFF016L19-           GTAATGGGAT                                                  
rJMFF038B03+          GTAATGGGATCTTAAGAAAGGATCTGATAGAGTACTAGCAGCCAACAGTGTTCTGCTACA
rJMFF016L19+          GTAATGGGATCTTAAGAAAGGATCTGATAGAGTACTAGCAGCCAACAGTGTTCTGCTACA
rJMFF040I15+          GTAATGGGATCTTAAGAAAGGATCTGATAGAGTACTAGCAGCCAACAGTGTTCTGCTACA
rJMSF010F16+          GTAATGGGATCNTAAGAAAGGATCTGATAGAGTACTAGCAGCCAACAGTGTTCTGCTACA
                      ____________________________________________________________
consensus             GTAATGGGATCTTAAGAAAGGATCTGATAGAGTACTAGCAGCCAACAGTGTTCTGCTACA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF039E09+          CTGATAATGAATTTGTTTCTTGCTTCAATGGCTTATGAA                     
rJMFF038B03+          CTGATAATGAATTTGTTTCTTGCTTCAATGGCTTATGAACCTGGTATAATCAGAA     
rJMFF016L19+          CTGATAATGAATTTGTTTCTTGCTTCAATGGCTTATGAACCTGGTATAATCAGAATTAGT
rJMFF040I15+          CTGATAATGAATTTGTTTCTTGCTTCAATGGCTTATGAACCTGGTATAATCAGAATTAGT
rJMSF010F16+          CTGATAATGAATTTGTTTCTTGCTTCAATGGCTTATGAACCTGGTATAATCAGAATTAGT
                      ____________________________________________________________
consensus             CTGATAATGAATTTGTTTCTTGCTTCAATGGCTTATGAACCTGGTATAATCAGAATTAGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF016L19+          ATTGAAACAAATTGACAGAATATTTACAACC                             
rJMFF040I15+          ATTGAAACAAATTGACAGAATATTTACAACCTTAATCATGGTTTTCTATATCTAACCAAC
rJMSF010F16+          ATTGAAACAAATTGACAGAATATTTACAACCTTAATCATGGTTTTCTATATCTAACCAAC
                      ____________________________________________________________
consensus             ATTGAAACAAATTGACAGAATATTTACAACCTTAATCATGGTTTTCTATATCTAACCAAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF040I15+          AAAAGCCCAGTCTCAATTGATACTCAATACCACTTTTAGAAAATTATTGCAGCTCATAGG
rJMSF010F16+          AAAAGCCCAGTCTCAATTGATACTCAATACCACTTTTAGAAAATTATTGCAGCTCATAGG
                      ____________________________________________________________
consensus             AAAAGCCCAGTCTCAATTGATACTCAATACCACTTTTAGAAAATTATTGCAGCTCATAGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF040I15+          CCCATTTATTTTTCCTCTCCTGTCCCTTTCCTTTCCCTTCATATTTAAGTGAATGATTAC
rJMSF010F16+          CCCATTTATTTTTCCTCTCCTGTCCCTTTCCTTTCCCTTCATATTTAAGTGAATGATTAC
                      ____________________________________________________________
consensus             CCCATTTATTTTTCCTCTCCTGTCCCTTTCCTTTCCCTTCATATTTAAGTGAATGATTAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF040I15+          AAAT                                                        
rJMSF010F16+          AAATTTATTGACTATTGACTCCACCCTGTACACACCCCATATTTATCATCACCTCCAGGT
                      ____________________________________________________________
consensus             AAATTTATTGACTATTGACTCCACCCTGTACACACCCCATATTTATCATCACCTCCAGGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF010F16+          TATTTTGGTCCATAAGATTTTTTCTTTTCTTTTTTAATGCAAATACATGCGAGCAAGGGC
                      ____________________________________________________________
consensus             TATTTTGGTCCATAAGATTTTTTCTTTTCTTTTTTAATGCAAATACATGCGAGCAAGGGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF010F16+          ATATTCAATTAAAGGAGTGTTGCATATTGCATATACTATTTTCTAGTTGCAGTTAAGCCG
                      ____________________________________________________________
consensus             ATATTCAATTAAAGGAGTGTTGCATATTGCATATACTATTTTCTAGTTGCAGTTAAGCCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF010F16+          GCCGTCCCTTTCCTCCCTTGCATTATTGAGGAGTCAATTTATGATGATGGGCGTGGTGGG
                      ____________________________________________________________
consensus             GCCGTCCCTTTCCTCCCTTGCATTATTGAGGAGTCAATTTATGATGATGGGCGTGGTGGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF010F16+          TGCCCAACGTCCACTTTTGTTAAGCTTTACAGTTAGTCACATCCACTCTCCGCTGTCANG
                      ____________________________________________________________
consensus             TGCCCAACGTCCACTTTTGTTAAGCTTTACAGTTAGTCACATCCACTCTCCGCTGTCANG