Contig 005623:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF010D17+                                    TGATGATGATATGCCTGCAGCTAGCCTTCCCCCC
                      ____________________________________________________________
consensus                                       TGATGATGATATGCCTGCAGCTAGCCTTCCCCCC
 
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rJMSF010D17+          TGTTGAAATTGAGNAGGATGAAGCTGCTGGCCGAGAGCCTGATAACCGCAGTAGTAGCTC
                      ____________________________________________________________
consensus             TGTTGAAATTGAGNAGGATGAAGCTGCTGGCCGAGAGCCTGATAACCGCAGTAGTAGCTC
 
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rJMSF010D17+          CAGTAGCTCTGGTAGCTCATGCAGTGATTCCTCTTCTTCTAGTGGTTCTGATTCAGGGAG
                      ____________________________________________________________
consensus             CAGTAGCTCTGGTAGCTCATGCAGTGATTCCTCTTCTTCTAGTGGTTCTGATTCAGGGAG
 
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rJMFF045L14+               CAGGCAGTGATTCAGATGCTGATGATGCACAGTCTTGACACTTATTTATCTGGAG
rJMSF010D17+          TTCTTCAGGCAGTGATTCAGATGCTGATGATGCACAGTCTTGACACTTATTTATCTGGAG
                      ____________________________________________________________
consensus             TTCTTCAGGCAGTGATTCAGATGCTGATGATGCACAGTCTTGACACTTATTTATCTGGAG
 
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rJMFF045L14+          TTGCAGAGGCTTTGGGCATCATGTTTGCTTCCTCTCTAGTCTCTATGTATGTGTGTTATC
rJMSF010D17+          TTGCAGAGGCTTTGGGCATCATGTTTGCTTCCTCTCTAGTCTCTATGTATGTGTGTTATC
                      ____________________________________________________________
consensus             TTGCAGAGGCTTTGGGCATCATGTTTGCTTCCTCTCTAGTCTCTATGTATGTGTGTTATC
 
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rJMFF045L14+          TATCAAGGGGGATATTTTCCAGATTGATAACTAACTACTGTGGAACTTGCTTGGTGGGAT
rJMSF010D17+          TATCAAGGGGGATATTTTCCAGATTGATAACTAACTACTGTGGAACTTGCTTGGTGGGAT
                      ____________________________________________________________
consensus             TATCAAGGGGGATATTTTCCAGATTGATAACTAACTACTGTGGAACTTGCTTGGTGGGAT
 
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rJMFF045L14+          GCAATGTTGAAAGATGCATGCCTTGGGTAGCACTTTGCAGGAGCAGCCAGAAGTGAAGCT
rJMSF010D17+          GCAATGTTGAAAGATGCATGCCTTGGGTAGCACTTTGCAGGAGCAGCCAGAAGTGAAGCT
                      ____________________________________________________________
consensus             GCAATGTTGAAAGATGCATGCCTTGGGTAGCACTTTGCAGGAGCAGCCAGAAGTGAAGCT
 
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rJMFF045L14+          CTGGTATTGAGGAGGCTATATTCATGGTCCACTTTTCAGTGAGAGGTTTAGTTAGCTGAG
rJMSF010D17+          CTGGTATTGAGAAGGCTATATTCATGGTCCACTTTTCAGTGAGAGGTTTAGTTAGCTGAG
                      ____________________________________________________________
consensus             CTGGTATTGAGGAGGCTATATTCATGGTCCACTTTTCAGTGAGAGGTTTAGTTAGCTGAG
 
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rJMFF045L14+          ATTGCCAATACCCTTTCATTTCCTATTCAATTCTTTCGTATTCTTGTTTGGGAAAGTGTT
rJMSF010D17+          ATTGCCAATACCCTTTCATTTCCTATTCAATTCTTTCATATTCTTGTTTGGGAAAGTGTT
                      ____________________________________________________________
consensus             ATTGCCAATACCCTTTCATTTCCTATTCAATTCTTTCGTATTCTTGTTTGGGAAAGTGTT
 
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rJMFF045L14+          GTTTTGGGAGTTTGTTTCATGTTGGAAAATTCACCACGAATCAGATCATTTGGGCAGTTT
rJMSF010D17+          GTTTTGGGAGTTTGTTTCATGTTGGAAAATTCACCACGAATCAGATCATTTGGGCAGTTT
                      ____________________________________________________________
consensus             GTTTTGGGAGTTTGTTTCATGTTGGAAAATTCACCACGAATCAGATCATTTGGGCAGTTT
 
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rJMFF045L14+          CCCTTCTGGAAGAAATGAAATACCTTCTAAGCTAAGATGCTAGGATGTCAGATGGTTGTA
rJMSF010D17+          CCCTTCTGGAAGAAATGAAATACCTTCTAAGCTAAGATGCTAGGATGTCAGATGGTTGTA
                      ____________________________________________________________
consensus             CCCTTCTGGAAGAAATGAAATACCTTCTAAGCTAAGATGCTAGGATGTCAGATGGTTGTA
 
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rJMFF045L14+          TGGTTTCTGGGCATGAATTTGGTGGGTGTCTCATCCTTTAGAACAGTTGGGAGATGTCCA
rJMSF010D17+          TGGTTTCTGGGCATGAATTTGGTGGGTGTCTCATCCTTTAGAACAGTTGGGAGATGTCCA
                      ____________________________________________________________
consensus             TGGTTTCTGGGCATGAATTTGGTGGGTGTCTCATCCTTTAGAACAGTTGGGAGATGTCCA
 
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rJMFF045L14+          AATTCTGGTGGTTGGCTGTCATCCAAGTTTAGGTTTTGAATTTAGATATAATATTCTGT 
rJMSF010D17+          AATTCTGGTGGTTGGCTGTCATCCAAGTTTAGGTTTTGAATTTAGATATAATATTCTGTT
                      ____________________________________________________________
consensus             AATTCTGGTGGTTGGCTGTCATCCAAGTTTAGGTTTTGAATTTAGATATAATATTCTGTT
 
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rJMSF010D17+          GTATACCAAGGTGCTAGGACGTCTGTATCAAATAGATTTTCTTGTACCTTAGCTACGGAT
                      ____________________________________________________________
consensus             GTATACCAAGGTGCTAGGACGTCTGTATCAAATAGATTTTCTTGTACCTTAGCTACGGAT