Contig 005622:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005F15Sequence473004459 (9)ref|XP_009802401.1|2e-18PREDICTED: xyloglucan galactosyltransferase KATAMARI1-like [Nicotiana sylvestri693005622 (8)ref|XP_009604656.1|4e-86PREDICTED: xyloglucan galactosyltransferase KATAMARI1 homolog [Nicotiana toment
JMFF026B22Sequence775005622 (8)ref|XP_009604656.1|2e-71PREDICTED: xyloglucan galactosyltransferase KATAMARI1 homolog [Nicotiana toment
JMFF029H16Sequence397004459 (9)ref|XP_009802401.1|3e-09PREDICTED: xyloglucan galactosyltransferase KATAMARI1-like [Nicotiana sylvestri667005622 (8)ref|XP_009604656.1|2e-75PREDICTED: xyloglucan galactosyltransferase KATAMARI1 homolog [Nicotiana toment
JMFF035A22Sequence538004459 (9)ref|XP_006357990.1|1e-26PREDICTED: xyloglucan galactosyltransferase KATAMARI1-like [Solanum tuberosum]663005622 (8)ref|XP_009604656.1|2e-80PREDICTED: xyloglucan galactosyltransferase KATAMARI1 homolog [Nicotiana toment
JMFF040E10Sequence519004459 (9)ref|XP_006357990.1|3e-27PREDICTED: xyloglucan galactosyltransferase KATAMARI1-like [Solanum tuberosum]690005622 (8)ref|XP_009604656.1|4e-65PREDICTED: xyloglucan galactosyltransferase KATAMARI1 homolog [Nicotiana toment
JMSF010C01Sequence372004459 (9)ref|XP_009802401.1|1e-05PREDICTED: xyloglucan galactosyltransferase KATAMARI1-like [Nicotiana sylvestri698005622 (8)ref|XP_009604656.1|5e-53PREDICTED: xyloglucan galactosyltransferase KATAMARI1 homolog [Nicotiana toment
JMSF022P19Sequence686004459 (9)ref|XP_006357990.1|2e-66PREDICTED: xyloglucan galactosyltransferase KATAMARI1-like [Solanum tuberosum]747005622 (8)ref|XP_009604656.1|8e-83PREDICTED: xyloglucan galactosyltransferase KATAMARI1 homolog [Nicotiana toment
JMSF051J22Sequence629004459 (9)ref|XP_006357990.1|3e-60PREDICTED: xyloglucan galactosyltransferase KATAMARI1-like [Solanum tuberosum]668005622 (8)ref|XP_009604656.1|6e-84PREDICTED: xyloglucan galactosyltransferase KATAMARI1 homolog [Nicotiana toment

Alignment

This contig is upended


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rJMSF051J22+                                                           AAGCGCCACAA
rJMFF035A22+                                                        GCCAAGCGCCACAA
rJMFF005F15+                                               TTCGTCGGCGCCAAGCGCCACAA
                      ____________________________________________________________
consensus                                                  TTCGTCGGCGCCAAGCGCCACAA
 
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rJMSF051J22+          AATCAA-GAACGACTTCCGAGGCATGCTAATGGACTACTGCATCGACGAGGATGACTG-C
rJMFF035A22+          AATCAAGGAACGACTTCCGAGGCATGCTAATGGACTACTGCATCGACGAGGATGACTG-C
rJMFF005F15+          AATCAA-GAACGACTTCCGAGGCATGCTAATGGACTACTGCATCGACGAGGATGACTG-C
rJMFF029H16+                                      AATGGACTACTGCATCGACGAGGATGACTG-C
rJMFF040E10+                 GAACGACTTCCGAGGCATGCTAATGGACTACTGCATCGACGAGGATGACTGCC
rJMSF022P19+                 GAACGACTTCCGAGGTATGCTAATGGACTACTGCATCGACGAGGATGACTG-C
rJMFF026B22+                                                 GCATCGACGAGGATGACTG-C
                      ____________________________________________________________
consensus             AATCAA-GAACGACTTCCGAGGCATGCTAATGGACTACTGCATCGACGAGGATGACTG-C
 
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rJMSF051J22+          CGCGCGGTGGACTGCTCCG-CCGTGATGTGCTCCGACGGGTCGCCGGCCGTGTTCGACGC
rJMFF035A22+          CGCGCGGTGGACTGCTCCG-CCGTGATGTGCTCCGACGGGTCGCCGGCCGTGTTCGACGC
rJMFF005F15+          CGCGCGGTGGACTGCTCCG-CCGTGATGTGCTCCGACGGGTCGCCGGCCGTGTTCGACGC
rJMFF029H16+          CGCGCGGTGGACTGCTCCG-CCGTGATGTGCTCCGACGGGTCGCCGGCCGTGTTCGACGC
rJMFF040E10+          CGCGCGGTGGACTGCTCNGCCCGTGATGTGCTCCGACGGGTCGCCGGCCGTGTTCGACGC
rJMSF022P19+          CGCGCGGTGGACTGCTCCG-CCGTGATGTGCTCCGACGGGTCGCCGGCCGTGTTCGACGC
rJMFF026B22+          CGCGCGGTGGACTGCTCCG-CCGTGATGTGCTCCGACGGGTCGCCGGCCGTGTTCGACGC
                      ____________________________________________________________
consensus             CGCGCGGTGGACTGCTCCG-CCGTGATGTGCTCCGACGGGTCGCCGGCCGTGTTCGACGC
 
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rJMSF051J22+          CTTCCTCCACTCCGATTTCTGCCTCCAACCCAAAGGAGACGGCATGACCCGACGGTCAAT
rJMFF035A22+          CTTCCTCCACTCCGATTTCTGCCTCCAACCCAAAGGAGACGGCATGACCCGACGGTCAAT
rJMFF005F15+          CTTCCTCCACTCCGATTTCTGCCTCCAACCCAAAGGAGACGGCATGACCCGACGGTCAAT
rJMFF029H16+          CTTCCTCCACTCCGATTTCTGCCTCCAACCCAAAGGAGACGGCATGACCCGACGGTCAAT
rJMFF040E10+          CTTCCTCCACTCCGATTTCTGCCTCCAACCCAAAGGAGACGGCATGACCCGACGGTCAAT
rJMSF022P19+          CTTCCTCCACTCCGATTTCTGCCTCCAACCCAAAGGAGACGGCATGACCCGACGGTCAAT
rJMFF026B22+          CTTCCTCCACTCCGATTTCTGCCTCCAACCCAAAGGAGACGGCATGACCCGACGGTCAAT
rJMSF010C01+                                CTCCAACCCAAAGGAGACGGCATGACCCGACGGTCAAT
                      ____________________________________________________________
consensus             CTTCCTCCACTCCGATTTCTGCCTCCAACCCAAAGGAGACGGCATGACCCGACGGTCAAT
 
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rJMSF051J22+          GTACGACTGTATGATCTCCGGCGCCGTCCCGGTGTACTTCTGGCAAGGCACGTACAAGGA
rJMFF035A22+          GTACGACTGTATGATCTCCGGCGCCGTCCCGGTGTACTTCTGGCAAGGCACGTACAAGGA
rJMFF005F15+          GTACGACTGTATGATCTCCGGCGCCGTCCCGGTGTACTTCTGGCAAGGCACGTACAAGGA
rJMFF029H16+          GTACGACTGTATGATCTCCGGCGCCGTCCCGGTGTACTTCTGGCAAGGCACGTACAAGGA
rJMFF040E10+          GTACGACTGTATGATCTCCGGCGCCGTCCCGGTGTACTTCTGGCAAGGCACGTACAAGGA
rJMSF022P19+          GTACGACTGTATGATCTCCGGCGCCGTCCCGGTGTACTTCTGGCAAGGCACGTACAAGGA
rJMFF026B22+          GTACGACTGTATGATCTCCGGCGCCGTCCCGGTGTACTTCTGGCAAGGCACGTACAAGGA
rJMSF010C01+          GTACGACTGTATGATCTCCGGCGCCGTCCCGGTGTACTTCTGGCAAGGCACGTACAAGGA
                      ____________________________________________________________
consensus             GTACGACTGTATGATCTCCGGCGCCGTCCCGGTGTACTTCTGGCAAGGCACGTACAAGGA
 
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rJMSF051J22+          CCAGTACGTGTGGCACCTGCCGTGGATTTCGGAGACATTCACCGTCTACGTCGACCACAA
rJMFF035A22+          CCAGTACGTGTGGCACCTGCCGTGGATTTCGGAGACATTCACCGTCTACGTCGACCACAA
rJMFF005F15+          CCAGTACGTGTGGCACCTGCCGTGGATTTCGGAGACATTCACCGTCTACGTCGACCACAA
rJMFF029H16+          CCAGTACGTGTGGCACCTGCCGTGGATTTCGGAGACATTCACCGTCTACGTCGACCACAA
rJMFF040E10+          CCAGTACGTGTGGCACCTGCCGTGGATTTCGGAGACATTCACCGTCTACGTCGACCACAA
rJMSF022P19+          CCAGTACGTGTGGCACCTGCCGTGGATTTCGGAGACATTCACCGTCTACGTCGACCACAA
rJMFF026B22+          CCAGTACGTGTGGCACCTGCCGTGGATTTCGGAGACATTCACCGTCTACGTCGACCACAA
rJMSF010C01+          CCAGTACGTGTGGCACCTGCCGTGGATTTCGGAGACATTCACCGTCTACGTCGACCACAA
                      ____________________________________________________________
consensus             CCAGTACGTGTGGCACCTGCCGTGGATTTCGGAGACATTCACCGTCTACGTCGACCACAA
 
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rJMSF051J22+          CGACGTAAGAAATACCAACGGTACGGTGATCAGAGACGTCCTAAAAAGAGTCCACCCAGA
rJMFF035A22+          CGACGTAAGAAATACCAACGGTACGGTGATCAGAGACGTCCTAAAAAGAGTCCACCCAGA
rJMFF005F15+          CGACGTAAGAAATACCAACGGTACGGTGATCAGAGACGTCCTAAAAAGAGTCCACCCAGA
rJMFF029H16+          CGACGTAAGAAATACCAACGGTACGGTGATCAGAGACGTCCTAAAAAGAGTCCACCCAGA
rJMFF040E10+          CGACGTAAGAAATACCAACGGTACGGTGATCAGAGACGTCCTAAAAAGAGTCCACCCAGA
rJMSF022P19+          CGACGTAAGAAATACCAACGGTACGGTGATCAGAGACGTCCTAAAAAGAGTCCACCCAGA
rJMFF026B22+          CGACGTAAGAAATACCAACGGTACGGTGATCAGAGACGTCCTAAAAAGAGTCCACCCAGA
rJMSF010C01+          CGACGTAAGAAATACCAACGGTACGGTGATCAGAGACGTCCTAAAAAGAGTCCACCCAGA
                      ____________________________________________________________
consensus             CGACGTAAGAAATACCAACGGTACGGTGATCAGAGACGTCCTAAAAAGAGTCCACCCAGA
 
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rJMSF051J22+          CAACGTTAGACAGATGAGAGAGACGCTGATAGATCTGATGCCCAAAATGCTTTACGCCAG
rJMFF035A22+          CAACGTTAGACAGATGAGAGAGACGCTGATAGATCTGATGCCCAAAATGCTTTACGCCAG
rJMFF005F15+          CAACGTTAGACAGATGAGAGAGACGCTGATAGATCTGATGCCCAAAATGCTTTACGCCAG
rJMFF029H16+          CAACGTTAGACAGATGAGAGAGACGCTGATAGATCTGATGCCCAAAATGCTTTACGCCAG
rJMFF040E10+          CAACGTTAGACAGATGAGAGAGACGCTGATAGATCTGATGCCCAAAATGCTTTACGCCAG
rJMSF022P19+          CAACGTTAGACAGATGAGAGAGACGCTGATAGATCTGATGCCCAAAATGCTTTACGCCAG
rJMFF026B22+          CAACGTTAGACAGATGAGAGAGACGCTGATAGATCTGATGCCCAAAATGCTTTACGCCAG
rJMSF010C01+          CAACGTTAGACAGATGAGAGAGACGCTGATAGATCTGATGCCCAAAATGCTTTACGCCAG
                      ____________________________________________________________
consensus             CAACGTTAGACAGATGAGAGAGACGCTGATAGATCTGATGCCCAAAATGCTTTACGCCAG
 
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rJMSF051J22+          CCGGAAAGAAGGCCTGGGAAGTATCAGAGACGCGTTTGACATCACGCTTGACAGAGTTCT
rJMFF035A22+          CCGGAAAGAAGGCCTGGGAAGTATCAGAGACGCGTTTGACATCACGCTTGACAGAGTTCT
rJMFF005F15+          CCGGAAAGAAGGCCTGGGAAGTATCAGAGACGCGTTTGACATCACGCTTGACAGAGTTCT
rJMFF029H16+          CCGGAAAGAAGGCCTGGGAAGTATCAGAGACGCGTTTGACATCACGCTTGACAGAGTTCT
rJMFF040E10+          CCGGAAAGAAGGCCTGGGAAGTATCAGAGACGCGTTTGACATCACGCTTGACAGAGTTCT
rJMSF022P19+          CCGGAAAGAAGGCCTGGGAAGTATCAGAGACGCGTTTGACATCACGCTTGACAGAGTTCT
rJMFF026B22+          CCGGAAAGAAGGCCTGGGAAGTATCAGAGACGCGTTTGACATCACGCTTGACAGAGTTCT
rJMSF010C01+          CCGGAAAGAAGGCCTGGGAAGTATCAGAGACGCGTTTGACATCACGCTTGACAGAGTTCT
                      ____________________________________________________________
consensus             CCGGAAAGAAGGCCTGGGAAGTATCAGAGACGCGTTTGACATCACGCTTGACAGAGTTCT
 
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rJMSF051J22+          GAAGAGATTGAAGGCTCGCAAATCGCATCTCTTATCCGGAGCGGCAGATGATTACGAGAT
rJMFF035A22+          GAAGAGATTGAAGGCTCGCAAATCGCATCTCTTATCCGGAGCGGCAGATGATTACGAGAT
rJMFF005F15+          GAAGAGATTGAAGGCTCGCAAATCGCATCTCTTATCCGGAGCGGCAGATGATTACGAGAT
rJMFF029H16+          GAAGAGATTGAAGGCTCGCAAATCGCATCTCTTATCCGGAGCGGCAGATGATTACGAGAT
rJMFF040E10+          GAAGAGATTGAAGGCTCGCAAATCGCATCTCTTATCCGGAGCGGCAGATGATTACGAGAT
rJMSF022P19+          GAAGAGATTGAAGGCTCGCAAATCGCATCTCTTATCCGGAGCGGCAGATGATTACGAGAT
rJMFF026B22+          GAAGAGATTGAAGGCTCGCAAATCGCATCTCTTATCCGGAGCGGCAGATGATTACGAGAT
rJMSF010C01+          GAAGAGATTGAAGGCTCGCAAATCGCATCTCTTATCCGGAGCGGCAGATGATTACGAGAT
                      ____________________________________________________________
consensus             GAAGAGATTGAAGGCTCGCAAATCGCATCTCTTATCCGGAGCGGCAGATGATTACGAGAT
 
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rJMSF051J22+          CTTCTAAGTTCTAACAAAATCGCCGTTTTCAGTCGCCTGAATCTTGATTTTCCGGCCGCC
rJMFF035A22+          CTTCTAAGTTCTAACAAAATCGCCGTTTTCAGTCGCCTGAATCTTGATTTTCCGGCCGCC
rJMFF005F15+          CTTCTAAGTTCTAACAAAATCGCCGTTTTCAGTCGCCTGAATCTTGATTTTCCGGCCGCC
rJMFF029H16+          CTTCTAAGTTCTAACAAAATCGCCGTTTTCAGTCGCCTGAATCTTGATTTTCCGGCCGCC
rJMFF040E10+          CTTCTAAGTTCTAACAAAATCGCCGTTTTCAGTCGCCTGAATCTTGATTTTCCGGCCGCC
rJMSF022P19+          CTTCTAAGTTCTAACAAAATCGCCGTTTTCAGTCGCCTGAATCTTGATTTTCCGGCCGCC
rJMFF026B22+          CTTCTAAGTTCTAACAAAATCGCCGTTTTCAGTCGCCTGAATCTTGATTTTCCGGCCGCC
rJMSF010C01+          CTTCTAAGTTCTAACAAAATCGCCGTTTTCAGTCGCCTGAATCTTGATTTTCCGGCCGCC
                      ____________________________________________________________
consensus             CTTCTAAGTTCTAACAAAATCGCCGTTTTCAGTCGCCTGAATCTTGATTTTCCGGCCGCC
 
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rJMSF051J22+          CTGTAAACTTAATTAGCTTGTTGTTATTAATTAATTATTACTATTGTATTCGTTTTT   
rJMFF035A22+          CTGTAAACTTAATTAGCTTGTTGTTATTAATTAATTATTACTAT                
rJMFF005F15+          CTGTAAACTTAATTAGCTTGTTGTTATTAATTAATTATTACTATTGTATTCGTTTTTTGG
rJMFF029H16+          CTGTAAACTTAATTAGCTTGTTGTTATTAATTAATTATTACTATTGTATTCGTTTTTTGG
rJMFF040E10+          CTGTAAACTTAATTAGCTTGTTGTTATTAATTAATTATTACTATTGTATTCGTTTTTTGG
rJMSF022P19+          CTGTAAACTTAATTAGCTTGTTGTTATTAATTAATTATTACTATTGTATTCGTTTTTTGG
rJMFF026B22+          CTGTAAACTTAATTAGCTTGTTGTTATTAATTAATTATTACTATTGTATTCGTTTTTTGG
rJMSF010C01+          CTGTAAACTTAATTAGCTTGTTGTTATTAATTAATTATTACTATTGTATTCGTTTTTTGG
                      ____________________________________________________________
consensus             CTGTAAACTTAATTAGCTTGTTGTTATTAATTAATTATTACTATTGTATTCGTTTTTTGG
 
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rJMFF005F15+          GTTCTGCATAGAG                                               
rJMFF029H16+          GTTCTGCATAGAGGACTGAAGAAGAAGAAACCAAGAT                       
rJMFF040E10+          GTTCTGCATAGAGGACTGAAGAAGAAGAAACCAAGAT                       
rJMSF022P19+          GTTCTGCATAGAGGACTGAAGAAGAAGAAACCAAGATTTATTTTTGCTGTTCTCCATATA
rJMFF026B22+          GTTCTGCATAGAGGACTGAAGAAGAAGAAACCAAGATTTATTTTTGCTGTTCTCCATATA
rJMSF010C01+          GTTCTGCATAGAGGACTGAAGAAGAAGAAACCAAGATTTATTTTTGCTGTTCTCCATATA
                      ____________________________________________________________
consensus             GTTCTGCATAGAGGACTGAAGAAGAAGAAACCAAGATTTATTTTTGCTGTTCTCCATATA
 
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rJMSF022P19+          TTACTACTGGATCGATCGG                                         
rJMFF026B22+          TTACTACTGGATCGATCGGTATATTACAGATAGCATAATAATGATGATGTTCTTTTTACA
rJMSF010C01+          TTACTACTGGATCGATCGGTATATTACAGATAGCATAATAATGATGATGTTCTTTTTACA
                      ____________________________________________________________
consensus             TTACTACTGGATCGATCGGTATATTACAGATAGCATAATAATGATGATGTTCTTTTTACA
 
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rJMFF026B22+          GAAAAATTTATTAGGTGAAATGGTAACATGAGATTT                        
rJMSF010C01+          GAAAAATNTATTAGGTGAAATGGTAACATGAGATTTCCGTTTGTGTAATGTAAAATTTTG
                      ____________________________________________________________
consensus             GAAAAATTTATTAGGTGAAATGGTAACATGAGATTTCCGTTTGTGTAATGTAAAATTTTG