Contig 005620:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF009O01Sequence293005620 (2)ref|XP_006355052.1|8e-24PREDICTED: uncharacterized protein LOC102604434 isoform X1 [Solanum tuberosum] 638005620 (2)ref|XP_006355052.1|2e-22PREDICTED: uncharacterized protein LOC102604434 isoform X1 [Solanum tuberosum]

Alignment

This contig is upended


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rJMSF009O01-                                AGGCAATTAACAAGAGCAAGTACAAGAATTCTCAACTT
                      ____________________________________________________________
consensus                                   AGGCAATTAACAAGAGCAAGTACAAGAATTCTCAACTT
 
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rJMSF009O01-          TTTCTAAGCATTGAAGAAGAGATTAGAGTTATCAACAAAACAATTCAGACTATATTATTC
                      ____________________________________________________________
consensus             TTTCTAAGCATTGAAGAAGAGATTAGAGTTATCAACAAAACAATTCAGACTATATTATTC
 
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rJMSF009O01-          TACATCCATCAGCAGGCTGCAGAATTCTAGCACAAGCAGAAGTTAATTTGACCACAGAAA
                      ____________________________________________________________
consensus             TACATCCATCAGCAGGCTGCAGAATTCTAGCACAAGCAGAAGTTAATTTGACCACAGAAA
 
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rJMSF009O01-          AATAAAATAAACACACACACAAGCTGTATGTTGCACCAATTCATTAGTGAATCAAGAAGT
                      ____________________________________________________________
consensus             AATAAAATAAACACACACACAAGCTGTATGTTGCACCAATTCATTAGTGAATCAAGAAGT
 
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rJMSF009O01-          AAAGCAATCCCACAGCTGCATAATCCTCACTAATTCGTAGCACAACTTTATTCACTTCAA
                      ____________________________________________________________
consensus             AAAGCAATCCCACAGCTGCATAATCCTCACTAATTCGTAGCACAACTTTATTCACTTCAA
 
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rJMSF009O01-          TGAATGATTCAAAAAACGTATAAAAACTAGCATAAAGATGCACCCCGTTGATGTTTGTTC
                      ____________________________________________________________
consensus             TGAATGATTCAAAAAACGTATAAAAACTAGCATAAAGATGCACCCCGTTGATGTTTGTTC
 
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JMSF009O01+                  TTTTACAGTCAAATCTCAAATTCCTTATAGGGTTCTCCACTTGATCACTGATT
rJMSF009O01-          ATCTTCTTTTTACAGTCAAATCTCAAATTCCTTATAGGGTTCTCCACTTGATCACTGATT
                      ____________________________________________________________
consensus             ATCTTCTTTTTACAGTCAAATCTCAAATTCCTTATAGGGTTCTCCACTTGATCACTGATT
 
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JMSF009O01+           CTCAGCCCCTTCATTGTTTACATTTCCGAATTTCTGCTTGAAGGAATCCTGCCTCTGTAA
rJMSF009O01-          CTCAGCCCCTTCATTGTTTACATTTCCGAATTTCTGCTTGAAGGAATCCTGCCTCTGTAA
                      ____________________________________________________________
consensus             CTCAGCCCCTTCATTGTTTACATTTCCGAATTTCTGCTTGAAGGAATCCTGCCTCTGTAA
 
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JMSF009O01+           CCACATCATATGCCCCTGGAGACCAGCGGCCCATGCGATTAGGATAGAGGCGAACCAGAA
rJMSF009O01-          CCACATCATATGCCCCTGGAGACCAGCGGCCCATGCGATTAGGATAGAGGCGAACCAGAA
                      ____________________________________________________________
consensus             CCACATCATATGCCCCTGGAGACCAGCGGCCCATGCGATTAGGATAGAGGCGAACCAGAA
 
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JMSF009O01+           CTTTTTGTCTTTGAGGAGGTCTTTTACTTGGAATTTCCTGGTTTCCATTGCGAAATCTAA
rJMSF009O01-          CTTTTTGTCTTTGAGGAGGTCTTTTACTTGGAATTTCCTGGTTTCCATTGCGAAATCTAA
                      ____________________________________________________________
consensus             CTTTTTGTCTTTGAGGAGGTCTTTTACTTGGAATTTCCTGGTTTCCATTGCGAAATCTAA
 
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JMSF009O01+           AACCCTAACCCTAGGAATGTGCGCGCAAATAGATCCGATTTTGATCGGAATCCGTATTCC
rJMSF009O01-          AACCCTAACCCTAGGAATGTGCGCGCAAATAGATCCGATTTTGATCGGAATCCGTATTCC
                      ____________________________________________________________
consensus             AACCCTAACCCTAGGAATGTGCGCGCAAATAGATCCGATTTTGATCGGAATCCGTATTCC