Contig 005615:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF009C10Sequence308013294 (3)761005615 (2)
JMSF013F17Sequence473013294 (3)687005615 (2)

Alignment

This contig is upended


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rJMSF009C10+                             TCTTAAGATATTGTTGGGAATTGAAAGAAGTTCCACCTACC
                      ____________________________________________________________
consensus                                TCTTAAGATATTGTTGGGAATTGAAAGAAGTTCCACCTACC
 
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rJMSF013F17+                              GAAGTTAATNGAGTTAGAATGTTGTTATTCTTCTCTTGTG
rJMSF009C10+          TTTTCAAATATTGGAACGTTGAAGTTAATTGTGTTAGAATGTTGTTATTCTTCTCTTGTG
                      ____________________________________________________________
consensus             TTTTCAAATATTGGAACGTTGAAGTTAATTGTGTTAGAATGTTGTTATTCTTCTCTTGTG
 
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rJMSF013F17+          ACTTCTGCAGACAAGTTATTGTTTAAGGGAAAGGCAGGTTCTCCACTTCGTGTTTGTAAA
rJMSF009C10+          ACTTCTGCAGACAAGTTATTGTTTAAGGGAAAGGCAGGTTCTCCACTTCGTGTTTGTAAA
                      ____________________________________________________________
consensus             ACTTCTGCAGACAAGTTATTGTTTAAGGGAAAGGCAGGTTCTCCACTTCGTGTTTGTAAA
 
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rJMSF013F17+          GTTGGAACTAAGGTNGAATTGCCTATTATTGAAAGATCTGAAGGAGAAAGTGTTGAAAGC
rJMSF009C10+          GTTGGAACTAAGGTTGAATTGCCTATTATTGAAAGATCTGAAGGAGAAAGTGTTGAAAGC
                      ____________________________________________________________
consensus             GTTGGAACTAAGGTTGAATTGCCTATTATTGAAAGATCTGAAGGAGAAAGTGTTGAAAGC
 
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rJMSF013F17+          TCTGAAGAAGAAAGTATCGAAAGCTCTAAACAAAGATTGAAAGCTCGGAAGAGTGTGATG
rJMSF009C10+          TCTGAAGAAGAAAGTATCGAAAGCTCTAAACAAAGATTGAAAGCTCGGAAGAGTGTGATG
                      ____________________________________________________________
consensus             TCTGAAGAAGAAAGTATCGAAAGCTCTAAACAAAGATTGAAAGCTCGGAAGAGTGTGATG
 
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rJMSF013F17+          AAATATATGAAGAAGAAGGTGCCGAAATCTATGAATGCATTGAAAGAATTGACTGAGGAA
rJMSF009C10+          AAATATATGAAGAAGAAGGTGCCGAAATCTATGAATGCATTGAAAGAATTGACTGAGGAA
                      ____________________________________________________________
consensus             AAATATATGAAGAAGAAGGTGCCGAAATCTATGAATGCATTGAAAGAATTGACTGAGGAA
 
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rJMSF013F17+          AGAAGAAAGTGACTTTATCTTTCAACGTGTAGGTTCCTGGCTCAACTTAATATGGTCCTC
rJMSF009C10+          AGAAGAAAGTGACTTTATCTTTCAACGTGTAGGTTCCTGGCTCAACTTAATATGGTCCTC
                      ____________________________________________________________
consensus             AGAAGAAAGTGACTTTATCTTTCAACGTGTAGGTTCCTGGCTCAACTTAATATGGTCCTC
 
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rJMSF013F17+          ATTGCTGAATAAGTTGTGTGTTGCTTTCATGAGTTCTTGCATTGTCTAAATTAAAGTTGA
rJMSF009C10+          ATTGCTGAATAAGTTGTGTGTTGCTTTCATGAGTTCTTGCATTGTCTAAATTAAAGTTGA
                      ____________________________________________________________
consensus             ATTGCTGAATAAGTTGTGTGTTGCTTTCATGAGTTCTTGCATTGTCTAAATTAAAGTTGA
 
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rJMSF013F17+          TGAAGTTGATAATTAGTATACGCCACTTGTCCAGTTCAATCCTGATTGGTGGTGATCTGT
rJMSF009C10+          TGAAGTTGATAATTAGTATACGCCACTTGTCCAGTTCAATCCTGATTGGTGGTGATCTGT
                      ____________________________________________________________
consensus             TGAAGTTGATAATTAGTATACGCCACTTGTCCAGTTCAATCCTGATTGGTGGTGATCTGT
 
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rJMSF013F17+          CTCGTTGGTTGGTAATTTGTGTAACCATGCATGTTGATATATTGAAGAAAGATGTTCATC
rJMSF009C10+          CTCGTTGGTTGGTAATTTGTGTAACCATGCATGTTGATATATTGAAGAAAGATGTTCATC
                      ____________________________________________________________
consensus             CTCGTTGGTTGGTAATTTGTGTAACCATGCATGTTGATATATTGAAGAAAGATGTTCATC
 
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rJMSF013F17+          ATCCCGCTTTCGGGAGAAAACGAACAGAAAGGATTTCTTGCTGCAATTCCCCAGTCAACT
rJMSF009C10+          ATCCCGCTTTCGGGAGAAAACGAACAGAAAGGATTTCTTGCTGCAATTCCCCAGTCAACT
                      ____________________________________________________________
consensus             ATCCCGCTTTCGGGAGAAAACGAACAGAAAGGATTTCTTGCTGCAATTCCCCAGTCAACT
 
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rJMSF013F17+          TTTCCAGTGAAGCTCAGTGGTGCACCAATATATGATGTATTTTTGGTTTCCATTTGATAT
rJMSF009C10+          TTTCCAGTGAAGCTCAGTGGTGCACCAATATATGATGTATTTTTGGTTTCCATTTGATAT
                      ____________________________________________________________
consensus             TTTCCAGTGAAGCTCAGTGGTGCACCAATATATGATGTATTTTTGGTTTCCATTTGATAT
 
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rJMSF013F17+          GAAC                                                        
rJMSF009C10+          GAACAGTTCAACTGTGTGTGTTATGATGTTTTTCTTCTCCAATGACACCATGTCTCAGTG
                      ____________________________________________________________
consensus             GAACAGTTCAACTGTGTGTGTTATGATGTTTTTCTTCTCCAATGACACCATGTCTCAGTG