Contig 005613:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF008L20Sequence292005613 (2)731005613 (2)ref|XP_010110280.1|4e-12Coatomer subunit beta'-2 [Morus notabilis] gb|EXC25800.1| Coatomer subunit beta'

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF008L20- GATTCGCTCCGAGCCCTACTCCCGCTCTTC
                      ____________________________________________________________
consensus GATTCGCTCCGAGCCCTACTCCCGCTCTTC
 
. : . : . : . : . : . :
JMSF008L20- TCTGCCTCAAAGCCGCACGCCACAGCTCACTCTTACTCTCTCAGATCTACGCCTCCAGCG
rJMSF008L20+ CGCCTCCAGCG
                      ____________________________________________________________
consensus TCTGCCTCAAAGCCGCACGCCACAGCTCACTCTTACTCTCTCAGATCTACGCCTCCAGCG
 
. : . : . : . : . : . :
JMSF008L20- CCATAGCCGCCGCCGACGCCACAGCCGCCGACGATGCCACCGCTACAGCTCACTCTCCAC
rJMSF008L20+ CCATAGCCGCCGCCGACGCCACAGCCGCCGACGATGCCACCGCTACAGCTCACTCTCCAC
                      ____________________________________________________________
consensus CCATAGCCGCCGCCGACGCCACAGCCGCCGACGATGCCACCGCTACAGCTCACTCTCCAC
 
. : . : . : . : . : . :
JMSF008L20- CGTTAGACCGTCGTTTCTTCCACCGATGCTGCCGCTACCACCGCCTCCCCTACGAAGACG
rJMSF008L20+ CGTTAGACCGTCGTTTCTTCCACCGATGCTGCCGCTACCACCGCCTCCCCTACGAAGACG
                      ____________________________________________________________
consensus CGTTAGACCGTCGTTTCTTCCACCGATGCTGCCGCTACCACCGCCTCCCCTACGAAGACG
 
. : . : . : . : . : . :
JMSF008L20- CTGACGCCTCTACCCAGCCACCGCCGTCCACTGCCGCGAACACGCAGTGGATGGTGAGAC
rJMSF008L20+ CTGACGCCTCTACCCAGCCACCGCCGTCCACTGCCGCGAACACGCAGTGGATGGTGAGAC
                      ____________________________________________________________
consensus CTGACGCCTCTACCCAGCCACCGCCGTCCACTGCCGCGAACACGCAGTGGATGGTGAGAC
 
. : . : . : . : . : . :
JMSF008L20- GATGGACAAAATATTTTGGACT
rJMSF008L20+ GATGGACAAAATATTTTGGACTTGAAGAAGCTATTAAGCTGATGGTATGGAATAACAATG
                      ____________________________________________________________
consensus GATGGACAAAATATTTTGGACTTGAAGAAGCTATTAAGCTGATGGTATGGAATAACAATG
 
. : . : . : . : . : . :
rJMSF008L20+ ATCAAAGTTTCAGCCTCAGGTTTATAGTTTTTAGTCTCCTTTTCTGGTTCAACATAGAGC
                      ____________________________________________________________
consensus ATCAAAGTTTCAGCCTCAGGTTTATAGTTTTTAGTCTCCTTTTCTGGTTCAACATAGAGC
 
. : . : . : . : . : . :
rJMSF008L20+ CTTTAAAAAGGACCATCTGAATCACAATTTATTCACTTCATGGCAGTTTTTCTTTATACT
                      ____________________________________________________________
consensus CTTTAAAAAGGACCATCTGAATCACAATTTATTCACTTCATGGCAGTTTTTCTTTATACT
 
. : . : . : . : . : . :
rJMSF008L20+ TGAAAACACATTGAATTATGGTCTTGAAAGGGTCTGGGCTATTGGTTATACCAAAGGTTC
                      ____________________________________________________________
consensus TGAAAACACATTGAATTATGGTCTTGAAAGGGTCTGGGCTATTGGTTATACCAAAGGTTC
 
. : . : . : . : . : . :
rJMSF008L20+ AAGAAGGGTTGTGATTGGTTATGAGGAGGGAACTATTATGGTTAAAAAGATCAGATTACG
                      ____________________________________________________________
consensus AAGAAGGGTTGTGATTGGTTATGAGGAGGGAACTATTATGGTTAAAAAGATCAGATTACG
 
. : . : . : . : . : . :
rJMSF008L20+ AGACTGCAAGTACTAATTATGAAACTCATCAAACACAATCTATTTACAAGATCGAGTTTG
                      ____________________________________________________________
consensus AGACTGCAAGTACTAATTATGAAACTCATCAAACACAATCTATTTACAAGATCGAGTTTG
 
. : . : . : . : . : . :
rJMSF008L20+ CTGTTATTGGAGATTGATGGGTGTTGAAGAGAAACAAATGTGGATTGATGGCGGGAAAGC
                      ____________________________________________________________
consensus CTGTTATTGGAGATTGATGGGTGTTGAAGAGAAACAAATGTGGATTGATGGCGGGAAAGC
 
. : . : . : . : . : . :
rJMSF008L20+ TGGCATTTCAGCATCACCTCCATCCCAAACCAACTGATTTTAATGTAGATTGTCATTTAT
                      ____________________________________________________________
consensus TGGCATTTCAGCATCACCTCCATCCCAAACCAACTGATTTTAATGTAGATTGTCATTTAT
 
. : . : . : . : . : . :
rJMSF008L20+ GAAGACTATTATATTATTGTTTAGACTTCAATTGATTATATTATTACTTACCTGATTGAT
                      ____________________________________________________________
consensus GAAGACTATTATATTATTGTTTAGACTTCAATTGATTATATTATTACTTACCTGATTGAT