Contig 005604:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF025N24Sequence551005604 (2)ref|XP_009765485.1|2e-57PREDICTED: sucrose transport protein SUC4-like isoform X1 [Nicotiana sylvestris
JMSF007K10Sequence477017755ref|XP_009765486.1|4e-47PREDICTED: sucrose transport protein SUC4-like isoform X2 [Nicotiana sylvestris773005604 (2)dbj|BAI60050.1|2e-97sucrose transporter [Nicotiana tabacum]

Alignment

This contig is upended


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rJMSF007K10+                 CGTGAAATTTATGGGGGTGAGCCAAATGAAGGAACAAATTATAGTACCGGAGT
                      ____________________________________________________________
consensus                    CGTGAAATTTATGGGGGTGAGCCAAATGAAGGAACAAATTATAGTACCGGAGT
 
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rJMFF025N24+                                                    TGGAATTACTTCTGTGTT
rJMSF007K10+          CAGAATGGGGTCACTGGGTCTAATGTTGAATTCTGTGGTCCTTGGAATTACTTCTGTGTT
                      ____________________________________________________________
consensus             CAGAATGGGGTCACTGGGTCTAATGTTGAATTCTGTGGTCCTTGGAATTACTTCTGTGTT
 
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rJMFF025N24+          CATGGAGAAGCTATGTCGAAAATGGGGGGCTGGATNTACATGGGGAGTGTCAAGTATTGT
rJMSF007K10+          CATGGAGAAGCTATGTCGAAAATGGGGGGCTGGATTTACATGGGGAGTGTCAAGTATTGT
                      ____________________________________________________________
consensus             CATGGAGAAGCTATGTCGAAAATGGGGGGCTGGATTTACATGGGGAGTGTCAAGTATTGT
 
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rJMFF025N24+          CATGTCTCTCTGCTTTATAGCAATGCTTATAATTACTGCCGTCAGGAACCACATGGACAT
rJMSF007K10+          CATGTCTCTCTGCTTTATAGCAATGCTTATAATTACTGCCGTCAGGAACCACATGGACAT
                      ____________________________________________________________
consensus             CATGTCTCTCTGCTTTATAGCAATGCTTATAATTACTGCCGTCAGGAACCACATGGACAT
 
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rJMFF025N24+          TGGTATCGGTGATCCTCCTCCAGATGGCATTGTTATTGCTGTGTTGGTAGTATTCACTAT
rJMSF007K10+          TGGTATCGGTGATCCTCCTCCAGATGGCATTGTTATTGCTGTGTTGGTAGTATTCACTAT
                      ____________________________________________________________
consensus             TGGTATCGGTGATCCTCCTCCAGATGGCATTGTTATTGCTGTGTTGGTAGTATTCACTAT
 
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rJMFF025N24+          TCTTGGGGCTCCACTAGCTATAACTTACAGTGTACCATATGCATTGGTATCTTCACGCAT
rJMSF007K10+          TCTTGGGGCTCCACTAGCTATAACTTACAGTGTACCATATGCATTGGTATCTTCACGCAT
                      ____________________________________________________________
consensus             TCTTGGGGCTCCACTAGCTATAACTTACAGTGTACCATATGCATTGGTATCTTCACGCAT
 
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rJMFF025N24+          TGAGGCTTCGGGGCTCGGCCAAGGACTATCAATGGGTGTNCTAAATNTGGCAATTGTTCT
rJMSF007K10+          TGAGGCTTTGGGGCTCGGCCAAGGACTATCAATGGGTGTACTAAATCTGGCAATTGTTCT
                      ____________________________________________________________
consensus             TGAGGCTTTGGGGCTCGGCCAAGGACTATCAATGGGTGTACTAAATCTGGCAATTGTTCT
 
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rJMFF025N24+          NCCCCAGATGTTNGTTTCCCTNGGTAGTGGNCCCTGGGANGAGCTATTNGGTGGAGGAAA
rJMSF007K10+          ACCCCAGATGTTCGTTTCCCTTGGTAGTGGACCCTGGGATGAGCTATTTGGTGGAGGAAA
                      ____________________________________________________________
consensus             ACCCCAGATGTTCGTTTCCCTTGGTAGTGGACCCTGGGATGAGCTATTTGGTGGAGGAAA
 
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rJMFF025N24+          TTCACCAGCCTTTGTTGTGGCAGCGATTTATGCATTTGATGGTGGACTCGTGGCCATCTT
rJMSF007K10+          TTCACCAGCCTTTGTTGTGGCAGCGATTTCTGCATTTGCTGGTGGACTCGTGGCCATCTT
                      ____________________________________________________________
consensus             TTCACCAGCCTTTGTTGTGGCAGCGATTTCTGCATTTGCTGGTGGACTCGTGGCCATCTT
 
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rJMFF025N24+          GGNTATNCCTCGANCAAAAGTTGACAAGCCGAAGATTCTCCCTTAAGCTGGNTAATCTCC
rJMSF007K10+          GGCTATACCTCGAACAAAAATTGACAAGCCGAAGATTCTCCCTTAAGCTGGTTAATCTCC
                      ____________________________________________________________
consensus             GGCTATACCTCGAACAAAAGTTGACAAGCCGAAGATTCTCCCTTAAGCTGGTTAATCTCC
 
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rJMFF025N24+          ACACAAGTCTTGCAGGTACTTNGACNTGGTTCTTTCCAGTNGACTNGTAGC         
rJMSF007K10+          ACACAAGTCTTGCAGGTACTTTGACTTGGTTCTTTCCAGTTGACTTGTAGCCTGTTTGAC
                      ____________________________________________________________
consensus             ACACAAGTCTTGCAGGTACTTTGACTTGGTTCTTTCCAGTTGACTTGTAGCCTGTTTGAC
 
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rJMSF007K10+          AATTGCTCAAATGTAAAGTTTTAAGAATCCAGCATTTACTGTGAGGTATTTTGTCGTATT
                      ____________________________________________________________
consensus             AATTGCTCAAATGTAAAGTTTTAAGAATCCAGCATTTACTGTGAGGTATTTTGTCGTATT
 
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rJMSF007K10+          CATTTTATTTTATTGTCCAACAGGAGAATATGCATGAAGATTTTGTAAATAAATGTCATG
                      ____________________________________________________________
consensus             CATTTTATTTTATTGTCCAACAGGAGAATATGCATGAAGATTTTGTAAATAAATGTCATG