Contig 005597:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF003A22Sequence296005597 (4)ref|XP_009625250.1|60.8PREDICTED: uncharacterized protein LOC104116155 [Nicotiana tomentosiformis]648005597 (4)ref|XP_009802942.1|80.5PREDICTED: uncharacterized protein LOC104248388 [Nicotiana sylvestris]
JMSF028A04Sequence449005597 (4)ref|XP_009625250.1|65.5PREDICTED: uncharacterized protein LOC104116155 [Nicotiana tomentosiformis]645005597 (4)ref|XP_009802942.1|80.5PREDICTED: uncharacterized protein LOC104248388 [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMSF028A04-                        GGATAATATGAGGGTTAAAACTTACAAGTTAAGAAAGTAATAATAA
rJMSF003A22-                      ATGGATAATATGAGGGTTAAAACTTACAAGTTAAGAAAGTAATAATAA
                      ____________________________________________________________
consensus                         ATGGATAATATGAGGGTTAAAACTTACAAGTTAAGAAAGTAATAATAA
 
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rJMSF028A04-          CAAAAATGGGAATAAAAAGAAAAAGATGAGAGATATCCACTTTTTTGCTTTTGGAATTTG
rJMSF003A22-          CAAAAATGGGAATAAAAAGAAAAAGATGAGAGATATCCACTTTTTTGCTTTTGGAATTTG
                      ____________________________________________________________
consensus             CAAAAATGGGAATAAAAAGAAAAAGATGAGAGATATCCACTTTTTTGCTTTTGGAATTTG
 
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rJMSF028A04-          GATGGAACGCACTACTGTATACGCGGTACACATCCAGTTACTTCTGGGCGACGTTAGCTT
rJMSF003A22-          GATGGAACGCACTACTGTATACGCGGTACACATCCAGTTACTTCTGGGCGACGTTAGCTT
                      ____________________________________________________________
consensus             GATGGAACGCACTACTGTATACGCGGTACACATCCAGTTACTTCTGGGCGACGTTAGCTT
 
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rJMSF028A04-          CTGACAACGACGTCGTCTCGCTTTTCCGTTTCCGGAGCCGGAAAACGAGAAGGAACGCGG
rJMSF003A22-          CTGACAACGACGTCGTCTCGCTTTTCCGTTTCCGGAGCCGGAAAACGAGAAGGAACGCGG
                      ____________________________________________________________
consensus             CTGACAACGACGTCGTCTCGCTTTTCCGTTTCCGGAGCCGGAAAACGAGAAGGAACGCGG
 
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rJMSF028A04-          AGGCGACGACCAAAACGACGCCGGTTAGTCCACACACCATGCTGGCCACAAACAGCACCT
JMSF028A04+                                CGGTTAGTNCACACACCATGNTGGCCACAAACAGCACCT
rJMSF003A22-          AGGCGACGACCAAAACGACGCCGGTTAGTCCACACACCATGCTGGCCACAAACAGCACCT
                      ____________________________________________________________
consensus             AGGCGACGACCAAAACGACGCCGGTTAGTCCACACACCATGCTGGCCACAAACAGCACCT
 
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rJMSF028A04-          CTCTTATCGCGTCATCCTTCTTCCCCTCACGTGAACTCCCTCCAATACTTCTGCCGCCAC
JMSF028A04+           CTNTTATCGCGTCATCCTTNTTCCCCTCACGTGAACTCCCTCCAATACTTCTGCCGCCAC
rJMSF003A22-          CTCTTATCGCGTCATCCTTCTTCCCCTCACGTGAACTCCCTCCAATACTTCTGCCGCCAC
                      ____________________________________________________________
consensus             CTCTTATCGCGTCATCCTTCTTCCCCTCACGTGAACTCCCTCCAATACTTCTGCCGCCAC
 
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rJMSF028A04-          CGCCGCCGACGCCGTTCCACAAAGAGGCCGTAAAATTCCTCGCCTCCGGCAGCTCCGAAG
JMSF028A04+           CGCCGCCGACGCCGTTCCACAAAGAGGCCGTAAAATTCCTCGCCTCCGGCAGCTCCGAAG
JMSF003A22+                  GACGCCGTTCCACAAAGAGGCCGTAAAATTCCTCGCCTCCGGCAGCTCCGAAG
rJMSF003A22-          CGCCGCCGACGCCGTTCCACAAAGAGGCCGTAAAATTCCTCGCCTCCGGCAGCTCCGAAG
                      ____________________________________________________________
consensus             CGCCGCCGACGCCGTTCCACAAAGAGGCCGTAAAATTCCTCGCCTCCGGCAGCTCCGAAG
 
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rJMSF028A04-          ACTCCGGCGAACCACCGAAGAAGGTGAGAATCTCCGACTTGTTGCCCGAGGATGAGTCCT
JMSF028A04+           ACTCCGGCGAACCACCGAAGAAGGTGAGAATCTCCGACTTGTTGCCCGAGGATGAGTCCT
JMSF003A22+           ACTCCGGCGAACCACCGAAGAAGGTGAGAATCTCCGACTTGTTGCCCGAGGATGAGTCCT
rJMSF003A22-          ACTCCGGCGAACCACCGAAGAAGGTGAGAATCTCCGACTTGTTGCCCGAGGATGAGTCCT
                      ____________________________________________________________
consensus             ACTCCGGCGAACCACCGAAGAAGGTGAGAATCTCCGACTTGTTGCCCGAGGATGAGTCCT
 
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rJMSF028A04-          GATTCCCCAAGCCGTGCTCCGACGGCCGGAGCTCTCTCCCGTCGGCTGCCGGGTTGAGGA
JMSF028A04+           GATTCCCCAAGCCGTGCTCCGACGGCCGGAGCTCTCTCCCGTCGGCTGCCGGGTTGAGGA
JMSF003A22+           GATTCCCCAAGCCGTGCTCCGACGGCCGGAGCTCTCTCCCGTCGGCTGCCGGGTTGAGGA
rJMSF003A22-          GATTCCCCAAGCCGTGCTCCGACGGCCGGAGCTCTCTCCCGTCGGCTGCCGGGTTGAGGA
                      ____________________________________________________________
consensus             GATTCCCCAAGCCGTGCTCCGACGGCCGGAGCTCTCTCCCGTCGGCTGCCGGGTTGAGGA
 
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rJMSF028A04-          TATTCAGGGAAACCAGAATTACAAACAATACGACGGCGTAGTTTGAGCAGTGACGGTCCA
JMSF028A04+           TATTCAGGGAAACCAGAATTACAAACAATACGACGGCGTAGTTTGAGCAGTGACGGTCCA
JMSF003A22+           TATTCAGGGAAACCAGAATTACAAACAATACGACGGCGTAGTTTGAGCAGTGACGGTCCA
rJMSF003A22-          TATTCAGGGAAACCAGAATTACAAACAATACGACGGCGTAGTTTGAGCAGTGACGGTCCA
                      ____________________________________________________________
consensus             TATTCAGGGAAACCAGAATTACAAACAATACGACGGCGTAGTTTGAGCAGTGACGGTCCA
 
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rJMSF028A04-          TCTAGAATTTGAGCTCTGTCGTCTTCCCCTGAAATTTTAGCTTAAAGATGACAGTTCCC 
JMSF028A04+           TCTAGAATTTGAGCTCTGTCGTCTTCCCCTGAAATTTTAGCTTAAAGATGACAGTTCCC 
JMSF003A22+           TCTAGAATTTGAGCTCTGTCGTCTTCCCCTGAAATTTTAGCTTAAAGATGACAGTTCCC 
rJMSF003A22-          TCTAGAATTTGAGCTCTGTCGTCTTCCCCTGAAATTTTAGCTTAAAGATGACAGTTCCCC
                      ____________________________________________________________
consensus             TCTAGAATTTGAGCTCTGTCGTCTTCCCCTGAAATTTTAGCTTAAAGATGACAGTTCCCC