Contig 005596:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF002O19Sequence232005596 (4)gb|EYU32608.1|7e-41hypothetical protein MIMGU_mgv1a024059mg [Erythranthe guttata]714005596 (4)ref|XP_009601082.1|2e-83PREDICTED: ammonium transporter 1 member 1, partial [Nicotiana tomentosiformis]
JMSF039P10Sequence647005596 (4)ref|XP_009601082.1|7e-84PREDICTED: ammonium transporter 1 member 1, partial [Nicotiana tomentosiformis]706005596 (4)ref|XP_009601082.1|1e-83PREDICTED: ammonium transporter 1 member 1, partial [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMSF039P10-                 GGGCGGGTTCGCCGCCATCACGTCCGGATGCTCCGTCGTAGAACCGTGGGCTGC
JMSF002O19-                 GGGCGGGTTCGCCGCCATCACGTCCGGATGCTCCGTCGTAGAACCGTGGGCTGC
rJMSF039P10+                GGGCGGGTTCGCCGCCATCACGTCCGGATGCTCCGTCGTAGAACCGTGGGCTGC
rJMSF002O19+                GGGCGGGTTCGCCGCCATCACGTCCGGATGCTCCGTCGTAGAACCGTGGGCTGC
                      ____________________________________________________________
consensus                   GGGCGGGTTCGCCGCCATCACGTCCGGATGCTCCGTCGTAGAACCGTGGGCTGC
 
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JMSF039P10-           GATCGTTTGCGGGTTTGTGGCGGCTCTGGTCTTAATCGGATGCAACAAACTGGCGGAAAT
JMSF002O19-           GATCGTTTGCGGGTTTGTGGCGGCTCTGGTCTTAATCGGATGCAACAAACTGGCGGAAAT
rJMSF039P10+          GATCGTTTGCGGGTTTGTGGCGGCTCTGGTCTTAATCGGATGCAACAAACTGGCGGAAAT
rJMSF002O19+          GATCGTTTGCGGGTTTGTGGCGGCTCTGGTCTTAATCGGATGCAACAAACTGGCGGAAAT
                      ____________________________________________________________
consensus             GATCGTTTGCGGGTTTGTGGCGGCTCTGGTCTTAATCGGATGCAACAAACTGGCGGAAAT
 
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JMSF039P10-           CTTCAAATACGACGATCCATTGGAGGCGGCGCAACTGCATGGCGGTTGTGGAGCATGGGG
JMSF002O19-           CTTCAAATACGACGATCCATTGGAGGCGGCGCAACTGCATGGCGGTTGTGGAGCATGGGG
rJMSF039P10+          CTTCAAATACGACGATCCATTGGAGGCGGCGCAACTGCATGGCGGTTGTGGAGCATGGGG
rJMSF002O19+          CTTCAAATACGACGATCCATTGGAGGCGGCGCAACTGCATGGCGGTTGTGGAGCATGGGG
                      ____________________________________________________________
consensus             CTTCAAATACGACGATCCATTGGAGGCGGCGCAACTGCATGGCGGTTGTGGAGCATGGGG
 
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JMSF039P10-           AATCATTTTCACGGGCTTATTTGCCAAGAAGAAGTACGTGAACGAGGTTTACCCTGGTGT
JMSF002O19-           AATCATTTTCACGGGCTTATTTGCCAAGAAGAAGTACGTGAACGAGGTTTACCCTGGT  
rJMSF039P10+          AATCATTTTCACGGGCTTATTTGCCAAGAAGAAGTACGTGAACGAGGTTTACCCTGGTGT
rJMSF002O19+          AATCATTTTCACGGGCTTATTTGCCAAGAAGAAGTACGTGAACGAGGTTTACCCTGGTGT
                      ____________________________________________________________
consensus             AATCATTTTCACGGGCTTATTTGCCAAGAAGAAGTACGTGAACGAGGTTTACCCTGGTGT
 
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JMSF039P10-           GCCGGGTCGACCATACGGGTTGTTAATGGGTGGCGGTGGGAAGTTACTGGGAGCCCACAT
rJMSF039P10+          GCCGGGTCGACCATACGGGTTGTTAATGGGTGGCGGTGGGAAGTTACTGGGAGCCCACAT
rJMSF002O19+          GCCGGGTCGACCATACGGGTTGTTAATGGGTGGCGGTGGGAAGTTACTGGGAGCCCACAT
                      ____________________________________________________________
consensus             GCCGGGTCGACCATACGGGTTGTTAATGGGTGGCGGTGGGAAGTTACTGGGAGCCCACAT
 
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JMSF039P10-           AATCCAGATACTCGTAATATCGGGATGGGTAAGCATTACAATGGGTCCCCTTTTCTACAT
rJMSF039P10+          AATCCAGATACTCGTAATATCGGGATGGGTAAGCATTACAATGGGTCCCCTTTTCTACAT
rJMSF002O19+          AATCCAGATACTCGTAATATCGGGATGGGTAAGCATTACAATGGGTCCCCTTTTCTACAT
                      ____________________________________________________________
consensus             AATCCAGATACTCGTAATATCGGGATGGGTAAGCATTACAATGGGTCCCCTTTTCTACAT
 
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JMSF039P10-           TCTTCATAAGCTAAAACTTTTACGAATCTCCCCCGATGACGAAATGGCGGGTATGGATTT
rJMSF039P10+          TCTTCATAAGCTAAAACTTTTACGAATCTCCCCCGATGACGAAATGGCGGGTATGGATTT
rJMSF002O19+          TCTTCATAAGCTAAAACTTTTACGAATCTCCCCCGATGACGAAATGGCGGGTATGGATTT
                      ____________________________________________________________
consensus             TCTTCATAAGCTAAAACTTTTACGAATCTCCCCCGATGACGAAATGGCGGGTATGGATTT
 
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JMSF039P10-           GACCCGCCATGGAGGGTTTGCATATTACCATGAAGAAGATTATCTCAAGCCTGGGATTCA
rJMSF039P10+          GACCCGCCATGGAGGGTTTGCATATTACCATGAAGAAGATTATCTCAAGCCTGGGATTCA
rJMSF002O19+          GACCCGCCATGGAGGGTTTGCATATTACCATGAAGAAGATTATCTCAAGCCTGGGATTCA
                      ____________________________________________________________
consensus             GACCCGCCATGGAGGGTTTGCATATTACCATGAAGAAGATTATCTCAAGCCTGGGATTCA
 
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JMSF039P10-           AATGGGGAAAATTGAATCCGCTGCTTCAAGTTAAATAATTTATTTGGATTATTATTGTTT
rJMSF039P10+          AATGGGGAAAATTGAATCCGCTGCTTCAAGTTAAATAATTTATTTGGATTATTATTGTTT
rJMSF002O19+          AATGGGGAAAATTGAATCCGCTGCTTCAAGTTAAATAATTTATTTGGATTATTATTGTTT
                      ____________________________________________________________
consensus             AATGGGGAAAATTGAATCCGCTGCTTCAAGTTAAATAATTTATTTGGATTATTATTGTTT
 
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JMSF039P10-           ACAAATACTATACTATATAGTAACAATTAGTAGTGTACGTAAATTCAGAGAAAATGATAT
rJMSF039P10+          ACAAATACTATACTATATAGTAACAATTAGTAGTGTACGTAAATTCAGAGAAAATGATAT
rJMSF002O19+          ACAAATACTATACTATATAGTAACAATTAGTAGTGTACGTAAATTCAGAGAAAATGATAT
                      ____________________________________________________________
consensus             ACAAATACTATACTATATAGTAACAATTAGTAGTGTACGTAAATTCAGAGAAAATGATAT
 
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JMSF039P10-           TGAAGCTCTTCCATATATATGAAAAGTTTTAGATTAATAATGGTTGGTTGATT       
rJMSF039P10+          TGAAGCTCTTCCATATATATGAAAAGTTTTAGATTAATAATGGTTGGTTGATTGAAAGAA
rJMSF002O19+          TGAAGCTCTTCCATATATATGAAAAGTTTTAGATTAATAATGGTTGGTTGATTGAAAGAA
                      ____________________________________________________________
consensus             TGAAGCTCTTCCATATATATGAAAAGTTTTAGATTAATAATGGTTGGTTGATTGAAAGAA
 
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rJMSF039P10+          GATATTGTAAA-CATGAGGA-CAAGGTTTTCTGATATAATTTGTCATTTCCCTT      
rJMSF002O19+          GATATTGTAAACCATGAGGACCAAGGTTTTCTGATATAATTTGTCATTTCCCTTATCTAC
                      ____________________________________________________________
consensus             GATATTGTAAACCATGAGGACCAAGGTTTTCTGATATAATTTGTCATTTCCCTTATCTAC