clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMSF001J06 | Sequence | 356 | 014559 | ref|XP_009621522.1| | 7e-27 | PREDICTED: glutathione S-transferase omega-like 2 [Nicotiana tomentosiformis] | 790 | 005585 (3) | ref|XP_006352730.1| | 2e-107 | PREDICTED: glutathione S-transferase omega-like 2-like [Solanum tuberosum] |
JMSF020N09 | Sequence | 647 | 013121 (5) | ref|XP_007050181.1| | 7e-24 | Set domain protein, putative isoform 2, partial [Theobroma cacao] gb|EOX94338.1| | 757 | 005585 (3) | ref|XP_011080108.1| | 7e-97 | PREDICTED: histone-lysine N-methyltransferase SUVR2-like [Sesamum indicum] |
JMSF020O09 | Sequence | 682 | 013121 (5) | ref|XP_011083058.1| | 8e-26 | PREDICTED: histone-lysine N-methyltransferase SUVR2 [Sesamum indicum] ref|XP_01 | 758 | 005585 (3) | ref|XP_011080108.1| | 3e-95 | PREDICTED: histone-lysine N-methyltransferase SUVR2-like [Sesamum indicum] |
This contig is upended
. : . : . : . : . : . :
rJMSF020N09+ GAA
____________________________________________________________
consensus GAA
. : . : . : . : . : . :
rJMSF020N09+ TAAGTCGAAAGTTACAGGTGTTTATGACGTCTGAAGGAAAAGGATGGGGCCTTCGGACTC
rJMSF020O09+ AAGTCGAAAGNTACAGGTGTTTATGACGTCTGAAGGAAAAGGATGGGGCCTTCGGACTC
____________________________________________________________
consensus TAAGTCGAAAGTTACAGGTGTTTATGACGTCTGAAGGAAAAGGATGGGGCCTTCGGACTC
. : . : . : . : . : . :
rJMSF020N09+ TTGAGGACCTACCAAGAGGCACATTTGTTTGTGAATATGTTGGAGAAGTTCTTACCAATG
rJMSF020O09+ TTGAGGACCTACCAAGAGGCACATTTGTTTGTGAATATGTTGGAGAAGTTCTTACCAATG
____________________________________________________________
consensus TTGAGGACCTACCAAGAGGCACATTTGTTTGTGAATATGTTGGAGAAGTTCTTACCAATG
. : . : . : . : . : . :
rJMSF020N09+ CTGAACTCTTTGGTCGTGTTTCACGAAGCCTTAGTGGTGAGAAGCGTTTCCATCCAGTGC
rJMSF020O09+ CTGAACTCTTTGGTCGTGTTTCACGAAGCCTTAGTGGTGAGAAGCGTTTCCATCCAGTGC
____________________________________________________________
consensus CTGAACTCTTTGGTCGTGTTTCACGAAGCCTTAGTGGTGAGAAGCGTTTCCATCCAGTGC
. : . : . : . : . : . :
rJMSF020N09+ TACTTGATGCAGATTGGGGTTCAGGAGGTGTGTTAAAGGATGAAGAAGCTCTTTGTTTAG
rJMSF020O09+ TACTTGATGCAGATTGGGGTTCAGGAGGTGTGTTAAAGGATGAAGAAGCTCTTTGTTTAG
____________________________________________________________
consensus TACTTGATGCAGATTGGGGTTCAGGAGGTGTGTTAAAGGATGAAGAAGCTCTTTGTTTAG
. : . : . : . : . : . :
rJMSF020N09+ ATGCTACATATTATGGGAATGTTGCAAGGTTTATTAATCACAGATGTTTTGATTCAAATT
rJMSF020O09+ ATGCTACATATTATGGGAATGTTGCAAGGTTTATTAATCACAGATGTTTTGATTCAAATT
____________________________________________________________
consensus ATGCTACATATTATGGGAATGTTGCAAGGTTTATTAATCACAGATGTTTTGATTCAAATT
. : . : . : . : . : . :
rJMSF020N09+ TGGTTGAGATCCCTGTCGAGATAGAGAGTCCTGATCACCACTATTATCATCTTGCTTTCT
rJMSF020O09+ TGGTTGAGATCCCTGTCGAGATAGAGAGTCCTGATCACCACTATTATCATCTTGCTTTCT
____________________________________________________________
consensus TGGTTGAGATCCCTGTCGAGATAGAGAGTCCTGATCACCACTATTATCATCTTGCTTTCT
. : . : . : . : . : . :
rJMSF020N09+ TCACTACAAGGGATGTTAAAGCCATGGAAGAATTGACTTGGGACTACGGAATTGATTTTG
rJMSF020O09+ TCACTACAAGGGATGTTAAAGCCATGGAAGAATTGACTTGGGACTACGGAATTGATTTTG
____________________________________________________________
consensus TCACTACAAGGGATGTTAAAGCCATGGAAGAATTGACTTGGGACTACGGAATTGATTTTG
. : . : . : . : . : . :
rJMSF020N09+ ATGACCTTGATTATCCAATAAAAGCATTCCAATGTCAGTGTGGAAGCCAGTTCTGCCGAA
rJMSF020O09+ ATGACCTTGATTATCCAATAAAAGCATTCCAATGTCAGTGTGGAAGCCAGTTCTGCCGAA
____________________________________________________________
consensus ATGACCTTGATTATCCAATAAAAGCATTCCAATGTCAGTGTGGAAGCCAGTTCTGCCGAA
. : . : . : . : . : . :
rJMSF020N09+ ATATCAAGCGATTGAGTAGGTCCAGAGGAAGGAGGTAAAATGAAGGTTACAGATATGATG
rJMSF020O09+ ATATCAAGCGATTGAGTAGGTCCAGAGGAAGGAGGTAAAATGAAGGTTACAGATATGATG
____________________________________________________________
consensus ATATCAAGCGATTGAGTAGGTCCAGAGGAAGGAGGTAAAATGAAGGTTACAGATATGATG
. : . : . : . : . : . :
rJMSF020N09+ CAACCCATAATGTGATAAGCCTAACTTTTTGGTGGACAACTTGTGGTCTGCACTTGTAAT
rJMSF020O09+ CAACCCATAATGTGATAAGCCTAACTTTTTGGTGGACAACTTGTGGTCTGCACTTGTAAT
____________________________________________________________
consensus CAACCCATAATGTGATAAGCCTAACTTTTTGGTGGACAACTTGTGGTCTGCACTTGTAAT
. : . : . : . : . : . :
rJMSF020N09+ CAGTGTGAATCTGCTGCTGCTGCTAAACCAACTCTCTTTATTCAACTTTCCCAACTTTTG
rJMSF020O09+ CAGTGTGAATCTGCTGCTGCTGCTAAACCAACTCTCTTTATTCAACTTTCCCAACTTTTG
rJMSF001J06- ACTTTTG
____________________________________________________________
consensus CAGTGTGAATCTGCTGCTGCTGCTAAACCAACTCTCTTTATTCAACTTTCCCAACTTTTG
. : . : . : . : . : . :
rJMSF020N09+ ACTGCTTTTTCTAGCTGCATTGCAGACTTGTACATCTTTGTTTGTACCAGTGGCAGCATA
rJMSF020O09+ ACTGCTTTTTCTAGCTGCATTGCAGACTTGTACATCTTTGTTTGTACCAGTGGCAGCATA
rJMSF001J06- ACTGCTTTTTCTAGCTGCATTGCAGACTTGTACATCTTTGTTTGTACCAGTGGCAGCATA
____________________________________________________________
consensus ACTGCTTTTTCTAGCTGCATTGCAGACTTGTACATCTTTGTTTGTACCAGTGGCAGCATA
. : . : . : . : . : . :
rJMSF020N09+ TCTTTATAATGTTATGGTAGATATAACCTAGTT
rJMSF020O09+ TCTTTATAATGTTATGGTAGATATAACCTAGTT
rJMSF001J06- TCTTTATAATGTTATGGTAGATATAACCTAGTTTGTTTATCTACTAGTAATACATCATGC
____________________________________________________________
consensus TCTTTATAATGTTATGGTAGATATAACCTAGTTTGTTTATCTACTAGTAATACATCATGC
. : . : . : . : . : . :
rJMSF001J06- ATTGATGCTTATACTATACATCCATTTTATCTGCTTTCAAGAAACAGAAAGCTGCTGCAA
____________________________________________________________
consensus ATTGATGCTTATACTATACATCCATTTTATCTGCTTTCAAGAAACAGAAAGCTGCTGCAA
. : . : . : . : . : . :
rJMSF001J06- CTTTTCTCCCATCTTCATCAAGGAGTTCCTATTAGGTGGCTTCAACAGTGTATCATCCTG
____________________________________________________________
consensus CTTTTCTCCCATCTTCATCAAGGAGTTCCTATTAGGTGGCTTCAACAGTGTATCATCCTG
. : . : . : . : . : . :
rJMSF001J06- GAAATCTGAGGGCATTACTGGTCGAATGCCACCGGGATTTAGTGGGAAAAGAGTCTTGTA
____________________________________________________________
consensus GAAATCTGAGGGCATTACTGGTCGAATGCCACCGGGATTTAGTGGGAAAAGAGTCTTGTA
. : . : . : . : . : . :
rJMSF001J06- GTATCCATCCATGATATCTCCCATATTGCAAGTCTCTGCAACCTTAGGAATCTGATAGAT
____________________________________________________________
consensus GTATCCATCCATGATATCTCCCATATTGCAAGTCTCTGCAACCTTAGGAATCTGATAGAT
. : . : . : . : . : . :
rJMSF001J06- GTCTCTCATGTATCCATGGAGGTTTGGGTATTGTATGATCTTCTTCTTCGAACACTTGAA
____________________________________________________________
consensus GTCTCTCATGTATCCATGGAGGTTTGGGTATTGTATGATCTTCTTCTTCGAACACTTGAA
. : . : . : . : . : . :
rJMSF001J06- CAGTACATGGTAGACCAGATCGAACCTGATCAAAGTAGTGAACAAGCACACATCTGCAAG
____________________________________________________________
consensus CAGTACATGGTAGACCAGATCGAACCTGATCAAAGTAGTGAACAAGCACACATCTGCAAG
. : . : . : . : . : . :
rJMSF001J06- CGTCAACACATCACCACACAGATACCTTGACCTCCCCAAATGATCATCAATCATTTCCAA
____________________________________________________________
consensus CGTCAACACATCACCACACAGATACCTTGACCTCCCCAAATGATCATCAATCATTTCCAA
. : . : . : . : . : . :
rJMSF001J06- TGTACTAAACACCTCTTTTACTGCTCTATCATAAGCTTCTTGACTCTGGGCAAACCCACA
____________________________________________________________
consensus TGTACTAAACACCTCTTTTACTGCTCTATCATAAGCTTCTTGACTCTGGGCAAACCCACA
. : . : . : . : . : . :
rJMSF001J06- CCTATAAACGCCGTTGTTTACTTTGGGGTATATGATCTGGTTCCATTTGGCGATCTCATG
____________________________________________________________
consensus CCTATAAACGCCGTTGTTTACTTTGGGGTATATGATCTGGTTCCATTTGGCGATCTCATG
. : . : . : . : . : . :
rJMSF001J06- TGTGAGTGAGGGTGGGGAAAGGTCTAATTCTGGATTATTTGCAATTCTGTTTAACCCGGA
____________________________________________________________
consensus TGTGAGTGAGGGTGGGGAAAGGTCTAATTCTGGATTATTTGCAATTCTGTTTAACCCGGA
. : . : . : . : . : . :
rJMSF001J06- ATTGAAGAACTCAATGATGTCGTAGCTCTCGTTACAGATAACCTGGTTTTTGTCGGAATC
____________________________________________________________
consensus ATTGAAGAACTCAATGATGTCGTAGCTCTCGTTACAGATAACCTGGTTTTTGTCGGAATC