Contig 005583:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF046N20+                                         GGACCGAGGGCTGGGCGGAACGTCGCATG
rJMSF001C01+                                     TGGTGGACCGAGGGCTGGGCGGAACGTCGCATG
                      ____________________________________________________________
consensus                                        TGGTGGACCGAGGGCTGGGCGGAACGTCGCATG
 
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rJMSF046N20+          TCTCCGCTAGCAACGTTGATTACTCCATCACCGTCTTATACTTCGGCGGCCACGACGACC
rJMSF001C01+          TCTCCGCTAGCAACGTTGATTACTCCATCACCGTCTTATACTTCGGCGGCCACGACGACC
                      ____________________________________________________________
consensus             TCTCCGCTAGCAACGTTGATTACTCCATCACCGTCTTATACTTCGGCGGCCACGACGACC
 
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rJMSF046N20+          GTGAAGCGCTCGCCTACGGCGAGCGCATGGCGGAGCATCCCGGTATCAGTTTACAGGTGG
rJMSF001C01+          GTGAAGCGCTCGCCTACGGCGAGCGCATGGCGGAGCATCCCGGTATCAGTTTACAGGTGG
                      ____________________________________________________________
consensus             GTGAAGCGCTCGCCTACGGCGAGCGCATGGCGGAGCATCCCGGTATCAGTTTACAGGTGG
 
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rJMSF046N20+          CCCGCTTCATATTAGACCCGGAGATCGCCGCGCAAAGCGTCACACTAGACGTGAACCAAG
rJMSF001C01+          CCCGCTTCATATTAGACCCGGAGATCGCCGCGCAAAGCGTCACACTAGACGTGAACCAAG
                      ____________________________________________________________
consensus             CCCGCTTCATATTAGACCCGGAGATCGCCGCGCAAAGCGTCACACTAGACGTGAACCAAG
 
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rJMSF046N20+          AAACAAGATCCTCGGAGGACGATGAAGGCTTCCTGGCGGACTTCAAGCAGAGAACGATGA
rJMSF001C01+          AAACAAGATCCTCGGAGGACGATGAAGGCTTCCTGGCGGACTTCAAGCAGAGAACGATGA
                      ____________________________________________________________
consensus             AAACAAGATCCTCGGAGGACGATGAAGGCTTCCTGGCGGACTTCAAGCAGAGAACGATGA
 
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rJMSF046N20+          AGAACAAATCGGTGAAGTACGTGGAGACGACAGTGAAAAACGGCGCAGAGGCGATCGAAG
rJMSF001C01+          AGAACAAATCGGTGAAGTACGTGGAGACGACAGTGAAAAACGGCGCAGAGGCGATCGAAG
                      ____________________________________________________________
consensus             AGAACAAATCGGTGAAGTACGTGGAGACGACAGTGAAAAACGGCGCAGAGGCGATCGAAG
 
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rJMSF046N20+          CGATTAAGGGGTTCAGTCGTTGCAATTTGTTGGTGGTGGGAAGAGTGGCGGAAGGGGAGA
rJMSF001C01+          CGATTAAGGGGTTCAGTCGTTGCAATTTGTTGGTGGTGGGAAGAGTGGCGGAAGGGGAGA
                      ____________________________________________________________
consensus             CGATTAAGGGGTTCAGTCGTTGCAATTTGTTGGTGGTGGGAAGAGTGGCGGAAGGGGAGA
 
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rJMSF046N20+          TAGTGGCGGCGTTGGGGAAGAAGGGTGAGTGCCCGGAATTGGGACCGGTGGGGAGCTTGT
rJMSF001C01+          TAGTGGCGGCGTTGGGGAAGAAGGGTGAGTGCCCGGAATTGGGACCGGTGGGGAGCTTGT
                      ____________________________________________________________
consensus             TAGTGGCGGCGTTGGGGAAGAAGGGTGAGTGCCCGGAATTGGGACCGGTGGGGAGCTTGT
 
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rJMSF046N20+          TAACTTACCCAGACTTCCCAACAACGGCTTCGGTTCTTGTGGTTCAGCAGTACCGCCCGG
rJMSF001C01+          TAACTTACCCAGACTTCCCAACAACGGCTTCGGTTCTTGTGGTTCAGCAGTACCGCCCGG
                      ____________________________________________________________
consensus             TAACTTACCCAGACTTCCCAACAACGGCTTCGGTTCTTGTGGTTCAGCAGTACCGCCCGG
 
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rJMSF046N20+          AGCTGTCGCTAAACCATTTGAATTCGCTCAAAGATGGAGACTCGACAGAAGGGGATAACT
rJMSF001C01+          AGCTGTCGCTAAACCATTTGAATTCGCTCAAAGATGGAGACTCGACAGAAGGGGATAACT
                      ____________________________________________________________
consensus             AGCTGTCGCTAAACCATTTGAATTCGCTCAAAGATGGAGACTCGACAGAAGGGGATAACT
 
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rJMSF046N20+          ATGATTCAGCTTGAATTGACTTCACTCCCTACACACTACCTGTGCTACTGCTCATCTTTC
rJMSF001C01+          ATGATTCAGCTTGAATTGACTTCACTCCCTACACACTA-CTGTGCTACTGCTCATCTTTC
                      ____________________________________________________________
consensus             ATGATTCAGCTTGAATTGACTTCACTCCCTACACACTACCTGTGCTACTGCTCATCTTTC
 
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rJMSF046N20+          ACTAACAAATAAGACTGGAGATATATCTGGATGGGCTTT                     
rJMSF001C01+          ACTAACAAATAAGA-TGGAGATATATCTGGATGGGCTTTTAATTAACATACACAATATGT
                      ____________________________________________________________
consensus             ACTAACAAATAAGACTGGAGATATATCTGGATGGGCTTTTAATTAACATACACAATATGT
 
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rJMSF001C01+          ATACTTTTAATTGAAAACCAACTAAAGTATCTCAAATCTTTACTTGTTNTATATGAAAAT
                      ____________________________________________________________
consensus             ATACTTTTAATTGAAAACCAACTAAAGTATCTCAAATCTTTACTTGTTNTATATGAAAAT