Contig 005581:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF031C02Sequence601009297 (5)ref|XP_006347534.1|7e-68PREDICTED: stomatin-like protein 2, mitochondrial-like [Solanum tuberosum]727005581 (5)ref|XP_009629937.1|5e-56PREDICTED: stomatin-like protein 2, mitochondrial [Nicotiana tomentosiformis]
JMFF051O20Sequence623009297 (5)ref|XP_006347534.1|1e-69PREDICTED: stomatin-like protein 2, mitochondrial-like [Solanum tuberosum]488005581 (5)ref|XP_009629937.1|3e-04PREDICTED: stomatin-like protein 2, mitochondrial [Nicotiana tomentosiformis]
JMSF002O24Sequence337009297 (5)ref|XP_006347534.1|1e-14PREDICTED: stomatin-like protein 2, mitochondrial-like [Solanum tuberosum]749005581 (5)ref|XP_009629937.1|2e-71PREDICTED: stomatin-like protein 2, mitochondrial [Nicotiana tomentosiformis]
JMSF020L11Sequence720009297 (5)ref|XP_011075869.1|2e-76PREDICTED: stomatin-like protein 2, mitochondrial [Sesamum indicum] ref|XP_01107809005581 (5)ref|XP_009629937.1|3e-70PREDICTED: stomatin-like protein 2, mitochondrial [Nicotiana tomentosiformis]
JMSF029D12Sequence678009297 (5)ref|XP_006347534.1|4e-98PREDICTED: stomatin-like protein 2, mitochondrial-like [Solanum tuberosum]764005581 (5)ref|XP_009629937.1|3e-69PREDICTED: stomatin-like protein 2, mitochondrial [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF020L11+ GGGGTTAGGGC
                      ____________________________________________________________
consensus GGGGTTAGGGC
 
. : . : . : . : . : . :
rJMSF029D12+ AAAGGGCTCAAGTTCTGGNATCAG
rJMSF002O24+ CTATGGAGATGCAAGCAGAAGCTGAACGTAAGGAAAAGGGCTCAAGTTCTGGAATCAG
rJMSF020L11+ AGCTATGGAGATGCAAGCAGAAGCTGGACGTAAG--AAAGGGCTCAAGTTCTGGAATCAG
                      ____________________________________________________________
consensus AGCTATGGAGATGCAAGCAGAAGCTGGACGTAAGGAAAAGGGCTCAAGTTCTGGAATCAG
 
. : . : . : . : . : . :
rJMSF029D12+ AAGGAGAAAGGCAAGCAAATATTAACATTGCTGATGGAAGGAAAAATGCCGTGATCCTTG
rJMSF002O24+ AAGGAGAAAGGCAAGCAAATATTAACATTGCTGATGGAAGGAAAAATGCCGTGATCCTTG
rJMSF020L11+ AAGGAGAAAGGCAAGCAAATATTAACATTGCTGATGGAAGGAAAAATGCCGTGATCCTTG
rJMFF031C02+ TGGAAGGAAAAATGCCGTGATCCTTG
                      ____________________________________________________________
consensus AAGGAGAAAGGCAAGCAAATATTAACATTGCTGATGGAAGGAAAAATGCCGTGATCCTTG
 
. : . : . : . : . : . :
rJMSF029D12+ AATCAGAAGCAGCAAAAATGGACCAGATTAACAGAGCTCAAGGTGAAGCTGAGGCCATTC
rJMSF002O24+ AATCAGAAGCAGCAAAAATGGACCAGATTAACAGAGCTCAAGGTGAAGCTGAGGCCATTC
rJMSF020L11+ AATCAGAAGCAGCAAAAATGGACCAGATTAACAGAGCTCAAGGTGAAGCTGAGGCCATTC
rJMFF031C02+ AATCAGAAGCAGCAAAAATGGACCAGATTAACAGAGCTCAAGGTGAAGCTGAGGCCATTC
                      ____________________________________________________________
consensus AATCAGAAGCAGCAAAAATGGACCAGATTAACAGAGCTCAAGGTGAAGCTGAGGCCATTC
 
. : . : . : . : . : . :
rJMSF029D12+ TTGCCAAAGCACAAGCTACAGCAAAAGGAATTGTTATGGTTTCTCAATCTCTCAAGGAAC
rJMSF002O24+ TTGCCAAAGCACAAGCTACAGCAAAAGGAATTGTTATGGTTTCTCAATCTCTCAAGGAAC
rJMSF020L11+ TTGCCAAAGCACAAGCTACAGCAAAAGGAATTGTTATGGTTTCTCAATCTCTCAAGGAAC
rJMFF031C02+ TTGCCAAAGCACAAGCTACAGCAAAAGGAATTGTTATGGTTTCTCAATCTCTCAAGGAAC
                      ____________________________________________________________
consensus TTGCCAAAGCACAAGCTACAGCAAAAGGAATTGTTATGGTTTCTCAATCTCTCAAGGAAC
 
. : . : . : . : . : . :
rJMSF029D12+ ACGAGGGTTCTGAGGCAGCAAATCTTAGAATTGCTGAGCAGTACATTCAAGCCTTCGGCA
rJMSF002O24+ ACGAGGGTTCTGAGGCAGCAAATCTTAGAATTGCTGAGCAGTACATTCAAGCCTTCGGCA
rJMSF020L11+ ACGAGGGTTCTGAGGCAGCAAATCTTAGAATTGCTGAGCAGTACATTCAAGCCTTCGGCA
rJMFF031C02+ ACGAGGGTTCTGAGGCAGCAAATCTTAGAATTGCTGAGCAGTACATTCAAGCCTTCGGCA
                      ____________________________________________________________
consensus ACGAGGGTTCTGAGGCAGCAAATCTTAGAATTGCTGAGCAGTACATTCAAGCCTTCGGCA
 
. : . : . : . : . : . :
rJMSF029D12+ ACATCGCAAAGGAGGGCACAACACTATTGCTTCCAACGAGTGCTTCTGATCCTGCCAGTA
rJMSF002O24+ ACATCGCAAAGGAGGGCACAACACTATTGCTTCCAACGAGTGCTTCTGATCCTGCCAGTA
rJMSF020L11+ ACATCGCAAAGGAGGGCACAACACTATTGCTTCCAACGAGTGCTTCTGATCCTGCCAGTA
rJMFF031C02+ ACATCGCAAAGGAGGGCACAACACTATTGCTTCCAACGAGTGCTTCTGATCCTGCCAGTA
rJMFF051O20+ TGCCAGTA
                      ____________________________________________________________
consensus ACATCGCAAAGGAGGGCACAACACTATTGCTTCCAACGAGTGCTTCTGATCCTGCCAGTA
 
. : . : . : . : . : . :
rJMSF029D12+ TGATTGCTCAAGCTCTGAATATCTACAAAGGCTTAGCAACCAAGAATTCTAGCAGTGGAT
rJMSF002O24+ TGATTGCTCAAGCTCTGAATATCTACAAAGGCTTAGCAACCAAGAATTCTAGCAGTGGAT
rJMSF020L11+ TGATTGCTCAAGCTCTGAATATCTACAAAGGCTTAGCAACCAAGAATTCTAGCAGTGGAT
rJMFF031C02+ TGATTGCTCAAGCTCTGAATATCTACAAAGGCTTAGCAACCAAGAATTCTAGCAGTGGAT
rJMFF051O20+ TGATTGCTCAAGCTCTGAATATCTACAAAGGCTTAGCAACCAAGAATTCTAGCAGTGGAT
                      ____________________________________________________________
consensus TGATTGCTCAAGCTCTGAATATCTACAAAGGCTTAGCAACCAAGAATTCTAGCAGTGGAT
 
. : . : . : . : . : . :
rJMSF029D12+ CTACCAAGGTCTCAGCCAAACAGAATGTTTCAACTGGATCCCTCGACGACCAGAACTCCA
rJMSF002O24+ CTACCAAGGTCTCAGCCAAACAGAATGTTTCAACTGGATCCCTCGACGACCAGAACTCCA
rJMSF020L11+ CTACCAAGGTCTCAGCCAAACAGAATGTTTCAACTGGATCCCTCGACGACCAGAACTCCA
rJMFF031C02+ CTACCAAGGTCTCAGCCAAACAGAATGTTTCAACTGGATCCCTCGACGACCAGAACTCCA
rJMFF051O20+ CTACCAAGGTCTCAGCCAAACAGAATGTTTCAACTGGATCCCTCGACGACCAGAACTCCA
                      ____________________________________________________________
consensus CTACCAAGGTCTCAGCCAAACAGAATGTTTCAACTGGATCCCTCGACGACCAGAACTCCA
 
. : . : . : . : . : . :
rJMSF029D12+ CTACTCCTATATCCAACGATGAAGATCAAGCAAGTGACCCTGTTTTCTCACTACAAACCC
rJMSF002O24+ CTACTCCTATATCCAACGATGAAGATCAAGCAAGTGACCCTGTTTTCTCACTACAAACCC
rJMSF020L11+ CTACTCCTATATCCAACGATGAAGATCAAGCAAGTGACCCTGTTTTCTCACTACAAACCC
rJMFF031C02+ CTACTCCTATATCCAACGATGAAGATCAAGCAAGTGACCCTGTTTTCTCACTACAAACCC
rJMFF051O20+ CTACTCCTATATCCAACGATGAAGATCAAGCAAGTGACCCTGTTTTCTCACTACAAACCC
                      ____________________________________________________________
consensus CTACTCCTATATCCAACGATGAAGATCAAGCAAGTGACCCTGTTTTCTCACTACAAACCC
 
. : . : . : . : . : . :
rJMSF029D12+ CCAAGCACAAAGATTAAGTGTGACAGACCCTCCTTCCCTGGTTCATTAGCCAAATTTTTA
rJMSF002O24+ CCAAGCACAAAGATTAAGTGTGACAGACCCTCCTTCCCTGGTTCATTAGCCAAATTTTTA
rJMSF020L11+ CCAAGCACAAAGATTAAGTGTGACAGACCCTCCTTCCCTGGTTCATTAGCCAAATTTTTA
rJMFF031C02+ CCAAGCACAAAGATTAAGTGTGACAGACCCTCCTTCCCTGGTTCATTAGCCAAATTTTTA
rJMFF051O20+ CCAAGCACAAAGATTAAGTGTGACAGACCCTCCTTCCCTGGTTCATTAGCCAAATTTTTA
                      ____________________________________________________________
consensus CCAAGCACAAAGATTAAGTGTGACAGACCCTCCTTCCCTGGTTCATTAGCCAAATTTTTA
 
. : . : . : . : . : . :
rJMSF029D12+ GCCTTAGTATTCTTGTTAAGGTGAATGTGGATCAAAGATTGACGATAGAATGAGTGTTCT
rJMSF002O24+ GCCTTAGTATTCTTGTTAAGGTGAATGTGGATCAAAGATTGACGATAGAATGAGTGTTCT
rJMSF020L11+ GCCTTAGTATTCTTGTTAAGGTGAATGTGGATCAAAGATTGACGATAGAATGAGTGTTCT
rJMFF031C02+ GCCTTAGTATTCTTGTTAAGGTGAATGTGGATCAAAGATTGACGATAGAATGAGTGTTCT
rJMFF051O20+ GCCTTAGTATTCTTGTTAAGGTGAATGTGGATCAAAGATTGACGATAGAATGAGTGTTCT
                      ____________________________________________________________
consensus GCCTTAGTATTCTTGTTAAGGTGAATGTGGATCAAAGATTGACGATAGAATGAGTGTTCT
 
. : . : . : . : . : . :
rJMSF029D12+ TTTTGTAGTCATAAAACAAGAAAGCGTTTTGGCCCATCATCACATCATACATCTCGCAGA
rJMSF002O24+ TTTTGTAGTCATAAAACAAGAAAGCGTTTTGGCCCATCATCACATCATACATCTCGCAGA
rJMSF020L11+ TTTTGTAGTCATAAAACAAGAAAGCGTTTTGGCCCATCATCACATCATACATCTCGCAGA
rJMFF031C02+ TTTTGTAGTCATAAAACAAGAAAGCGTTTTGGCCCATCATCACATCATACATCTCGCAGA
rJMFF051O20+ TTTTGTAGTCATAAAACAAGAAAGCGTTTTGGCCCATCATCACATCATACATCTCGCAGA
                      ____________________________________________________________
consensus TTTTGTAGTCATAAAACAAGAAAGCGTTTTGGCCCATCATCACATCATACATCTCGCAGA
 
. : . : . : . : . : . :
rJMSF029D12+ AACATACTGACTTTTTGCAATTACCCAAACTTCTGACAGAGTTTCAAATTCACTTGATTG
rJMSF002O24+ AACATACTGACTTTTTGCAATTACCCAAACT
rJMSF020L11+ AACATACTGACTTTTTGCAATTACCCAAACTTCTGACAGAGTTTCAAATTCACTTGATTG
rJMFF031C02+ AACATACTGACTTTTTGCAATTACCCAAACTTCTGACAGAGTTTCAAATTCACTTGATTG
rJMFF051O20+ AACATACTGACTTTTTGCAATTACCCAAACTTCTGACAGAGTTTCAAATTCACTTGATTG
                      ____________________________________________________________
consensus AACATACTGACTTTTTGCAATTACCCAAACTTCTGACAGAGTTTCAAATTCACTTGATTG
 
. : . : . : . : . : . :
rJMSF029D12+ TAGTTGTCATCCTAAGAATA
rJMSF020L11+ TAGTTGTCATCCTAAGAATA
rJMFF031C02+ TAGTTGTCATCCTAAGAATATTTTCCTTCGAAT
rJMFF051O20+ TAGTTGTCATCCTAAGAATATTTTCCTTCGAATTGAAAGAATAGTACTCTTTAATTGACC
                      ____________________________________________________________
consensus TAGTTGTCATCCTAAGAATATTTTCCTTCGAATTGAAAGAATAGTACTCTTTAATTGACC