Contig 005580:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF051O02Sequence637000302 (2)ref|XP_010463941.1|1e-55PREDICTED: tryptophan--tRNA ligase, cytoplasmic-like [Camelina sativa]556005580 (2)ref|XP_008788272.1|1e-58PREDICTED: tryptophan--tRNA ligase, cytoplasmic-like [Phoenix dactylifera]
JMSF048M15Sequence651000302 (2)ref|XP_006408175.1|2e-117hypothetical protein EUTSA_v10020864mg [Eutrema salsugineum] gb|ESQ49628.1| hypo699005580 (2)ref|XP_011074471.1|280PREDICTED: tryptophan--tRNA ligase, cytoplasmic [Sesamum indicum]

Alignment

This contig is upended


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rJMSF048M15+                 ATTTCCGAATGACACGAGACGTTGCTCCTCGAATAGGCTATCATAAGCCTGCT
                      ____________________________________________________________
consensus                    ATTTCCGAATGACACGAGACGTTGCTCCTCGAATAGGCTATCATAAGCCTGCT
 
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rJMSF048M15+          TTAATTGAATCATCGTTCTTTCCTGCTCTACAGGGTGAGACGGGAAAAATGTCTGCTAGT
                      ____________________________________________________________
consensus             TTAATTGAATCATCGTTCTTTCCTGCTCTACAGGGTGAGACGGGAAAAATGTCTGCTAGT
 
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rJMSF048M15+          GATCCAAATTCTGCAATATACGTGACAGATTCTGCAAAAGACATTAAAAATAAGATAAAC
rJMFF051O02+                                                      TAAAAATAAGATAANC
                      ____________________________________________________________
consensus             GATCCAAATTCTGCAATATACGTGACAGATTCTGCAAAAGACATTAAAAATAAGATAAAC
 
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rJMSF048M15+          AGATATGCATTTTCTGGTGGGCAAGATTCTATAGAATTGCACAGGAAATACGGAGCTAAC
rJMFF051O02+          AGATATGCATTTTCTGGTGGGCAAGATTCTATAGAATTGCACAGGAAATACGGAGCTAAC
                      ____________________________________________________________
consensus             AGATATGCATTTTCTGGTGGGCAAGATTCTATAGAATTGCACAGGAAATACGGAGCTAAC
 
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rJMSF048M15+          CTTGAGGTTGATATACCAATCAAATACCTGGGATTTTTCCTGGAGGATGATGCAGAACTG
rJMFF051O02+          CTGNAGGTTGATATACCAATCAAATACCTGGGATTTTTCCTGGATGATGATGCAGAACTG
                      ____________________________________________________________
consensus             CTTGAGGTTGATATACCAATCAAATACCTGGGATTTTTCCTGGATGATGATGCAGAACTG
 
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rJMSF048M15+          GAGCACATTAGAAAGGAATATGGGGCTGGGCGTATGCTGACAGGTGAAGTCAAGAAGCGG
rJMFF051O02+          GAGCACATTAGAAAGGAATATGGGGCTGGGCGTATGCTGACAGGTGAAGTCAAGAAGAGG
                      ____________________________________________________________
consensus             GAGCACATTAGAAAGGAATATGGGGCTGGGCGTATGCTGACAGGTGAAGTCAAGAAGCGG
 
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rJMSF048M15+          CTTATTGAAGTTATAACAGAGGTTGTTGAAAGACATAGGCGAGCGAGGGCAGCAGTTACT
rJMFF051O02+          CTTATTGAAGTTATAACAGAGGTTGTTGAAAGACATAGGCAAGCGAGGGCAGCAGTTACT
                      ____________________________________________________________
consensus             CTTATTGAAGTTATAACAGAGGTTGTTGAAAGACATAGGCGAGCGAGGGCAGCAGTTACT
 
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rJMSF048M15+          GACGAGATGGTAGATGCGTTCATGGCTGTACGCCCACTTCCAAATATGTTTTGCTGAACT
rJMFF051O02+          GATGAGATGGTAGATGCATTCATGGCTGTACGCCCACTTCCAAATATGTTTTGCTGAACT
                      ____________________________________________________________
consensus             GATGAGATGGTAGATGCGTTCATGGCTGTACGCCCACTTCCAAATATGTTTTGCTGAACT
 
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rJMSF048M15+          AACTTTCATGAGTTCTGGGT                                        
rJMFF051O02+          AACTTTCATCAGTTCTGGGTACATGTGATGAAGAGGCAGAGATAGAATATGATTTTACTA
                      ____________________________________________________________
consensus             AACTTTCATGAGTTCTGGGTACATGTGATGAAGAGGCAGAGATAGAATATGATTTTACTA
 
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rJMFF051O02+          GAGACTAGAGACTAGAGAGAGAAGAGTGATTTGGATTTGGAAATTACCCACCCATGCATG
                      ____________________________________________________________
consensus             GAGACTAGAGACTAGAGAGAGAAGAGTGATTTGGATTTGGAAATTACCCACCCATGCATG
 
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rJMFF051O02+          TTATGCAAATTATATTAACTACTGAGACTCGAAATTTCTTTCCTTGGTGTTGGGGAATTT
                      ____________________________________________________________
consensus             TTATGCAAATTATATTAACTACTGAGACTCGAAATTTCTTTCCTTGGTGTTGGGGAATTT
 
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rJMFF051O02+          TGTGGTGATATGCTCATTTATAATTATATAGACAAAAAAAAAAAAAAAACTCTCCAGGGT
                      ____________________________________________________________
consensus             TGTGGTGATATGCTCATTTATAATTATATAGACAAAAAAAAAAAAAAAACTCTCCAGGGT