Contig 005579:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF027C23Sequence523000301 (3)gb|ABG37022.1|2e-52serine protease [Nicotiana tabacum]661005579 (3)ref|XP_009608769.1|3e-70PREDICTED: subtilisin-like protease SDD1 [Nicotiana tomentosiformis]
JMFF051L16Sequence425000301 (3)ref|XP_009614059.1|2e-32PREDICTED: subtilisin-like protease [Nicotiana tomentosiformis]271005579 (3)
JMFF051N16Sequence523000301 (3)gb|ABG37022.1|2e-52serine protease [Nicotiana tabacum]488005579 (3)ref|XP_009608769.1|2e-34PREDICTED: subtilisin-like protease SDD1 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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rJMFF027C23+                                                   CCCAATCCAGAATCAGCAC
                      ____________________________________________________________
consensus                                                      CCCAATCCAGAATCAGCAC
 
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rJMFF027C23+          CTCGTCACTGCCAGCGTCTTCTCCATTGGCGCAGGACACGTGAACCCCTCCAAAGCAAAT
                      ____________________________________________________________
consensus             CTCGTCACTGCCAGCGTCTTCTCCATTGGCGCAGGACACGTGAACCCCTCCAAAGCAAAT
 
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rJMFF027C23+          GATCCAGGACTGGTTTACGACACCAAACCCGAAGACTACCTGCCATATCTCTGCGGGTTG
                      ____________________________________________________________
consensus             GATCCAGGACTGGTTTACGACACCAAACCCGAAGACTACCTGCCATATCTCTGCGGGTTG
 
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rJMFF027C23+          AACTACACGAACCGGGAAGTCGGGGTGATTCTGCAACACAGGGTGAATTGCTCAGCCGTG
rJMFF051N16+                                                              CAGCCGTG
                      ____________________________________________________________
consensus             AACTACACGAACCGGGAAGTCGGGGTGATTCTGCAACACAGGGTGAATTGCTCAGCCGTG
 
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rJMFF027C23+          ATAAGCATTCCAGAAGCACAACTGAACTATCCTTCGTTTTCCATCATCCTGGAATCAACT
rJMFF051N16+          ATAAGCATTCCAGAAGCACAACTGAACTATCCTTCGTTTTCCATCATCCTGGAATCAACT
                      ____________________________________________________________
consensus             ATAAGCATTCCAGAAGCACAACTGAACTATCCTTCGTTTTCCATCATCCTGGAATCAACT
 
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rJMFF027C23+          GCTCAGACATACACAAGAACAGTGACCAATGTTGGAGAAGCAAGTTCATTTTATACCGTG
rJMFF051N16+          GCTCAGACATACACAAGAACAGTGACCAATGTTGGAGAAGCAAGTTCATTTTATACCGTG
                      ____________________________________________________________
consensus             GCTCAGACATACACAAGAACAGTGACCAATGTTGGAGAAGCAAGTTCATTTTATACCGTG
 
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rJMFF027C23+          GAAATTTTTGAACCGCCTGGTGTTAAGGTGAATGTTGAGCCCCGTGAACTCCAGTTTTCC
rJMFF051N16+          GAAATTTTTGAACCGCCTGGTGTTAAGGTGAATGTTGAGCCCCGTGAACTCCAGTTTTCC
                      ____________________________________________________________
consensus             GAAATTTTTGAACCGCCTGGTGTTAAGGTGAATGTTGAGCCCCGTGAACTCCAGTTTTCC
 
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rJMFF027C23+          AAGGTGAACCAGAAGCTCACGTACAATGTGACATTTAGCTTGTCGTCCAAGGCGGCCAGG
rJMFF051L16+                          TCACGTACAATGTGACATTTAGCTTGTCGTCCAAGGCGGCCAGG
rJMFF051N16+          AAGGTGAACCAGAAGCTCACGTACAATGTGACATTTAGCTTGTCGTCCAAGGCGGCCAGG
                      ____________________________________________________________
consensus             AAGGTGAACCAGAAGCTCACGTACAATGTGACATTTAGCTTGTCGTCCAAGGCGGCCAGG
 
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rJMFF027C23+          TCGAACATGCCGCCAGTGGTTCAAGGAGCTTTGAGGTGGAAATCTGTTAAGCACCATGTT
rJMFF051L16+          TCGAACATGCCGCCAGTGGTTCAAGGAGCTTTGAGGTGGAAATCTGTTAAGCACCATGTT
rJMFF051N16+          TCGAACATGCCGCCAGTGGTTCAAGGAGCTTTGAGGTGGAAATCTGTTAAGCACCATGTT
                      ____________________________________________________________
consensus             TCGAACATGCCGCCAGTGGTTCAAGGAGCTTTGAGGTGGAAATCTGTTAAGCACCATGTT
 
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rJMFF027C23+          AGGAGTCCCATTGCAGCTAAACTGGTGTAGCACCAGCTTGTAATTACATTATTCTTTTTC
rJMFF051L16+          AGGAGTCCCATTGCAGCTAAACTGGTGTAGCACCAGCTTGTAATTACATTATTCTTTTTC
rJMFF051N16+          AGGAGTCCCATTGCAGCTAAACTGGTGTAGCACCAGCTTGTAATTACATTATTCTTTTTC
                      ____________________________________________________________
consensus             AGGAGTCCCATTGCAGCTAAACTGGTGTAGCACCAGCTTGTAATTACATTATTCTTTTTC
 
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rJMFF027C23+          CATTTGCCAGTTTTATGATTACTGTTCTTTGCCCCTTAGCTTGTAATGTTTGTTCCCACA
rJMFF051L16+          CACTTGCCAGTTTTATGATTACTGTTCTTTGCCCCTTAGCTTGTAATGTTTGTTCCCACA
rJMFF051N16+          CACTTGCCAGTTTTATGATTACTGTTCTTTGCCCCTTAGCTTGTAATGTTTGTTCCCACA
                      ____________________________________________________________
consensus             CACTTGCCAGTTTTATGATTACTGTTCTTTGCCCCTTAGCTTGTAATGTTTGTTCCCACA
 
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rJMFF027C23+          AATATATGTTGCCATGGTGGGACGATATTAGTGC                          
rJMFF051L16+          AATATATGTTGCCATGGTGGGACGATATTAGTGC                          
rJMFF051N16+          AATATATGTTGCCATGGTGGGACGATATTAGTGCATAATTTATTTACTTTCATTCTCGGT
                      ____________________________________________________________
consensus             AATATATGTTGCCATGGTGGGACGATATTAGTGCATAATTTATTTACTTTCATTCTCGGT