Contig 005577:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF051L13Sequence597007499 (2)emb|CDP02341.1|2e-72unnamed protein product [Coffea canephora]523005577 (2)gb|KDO37478.1|1e-60hypothetical protein CISIN_1g026784mg [Citrus sinensis]
JMSF033N18Sequence210007499 (2)710005577 (2)gb|KDO37478.1|6e-94hypothetical protein CISIN_1g026784mg [Citrus sinensis]

Alignment

This contig is upended


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rJMSF033N18+                                     GTCCAGGACNNTGCATGCGGTGGTATGCACACA
                      ____________________________________________________________
consensus                                        GTCCAGGACNNTGCATGCGGTGGTATGCACACA
 
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rJMSF033N18+          TGTGCTCTGACCACTAAAGGAGCTCTTTATACCTGGGGTGGAGGTCAAGTTGGGCAATTG
                      ____________________________________________________________
consensus             TGTGCTCTGACCACTAAAGGAGCTCTTTATACCTGGGGTGGAGGTCAAGTTGGGCAATTG
 
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rJMSF033N18+          GGCCTTGGGCCCGTATCGGGATCTTTCTCTTGCAAACTCAATGAATCAGATGTGATGCTT
                      ____________________________________________________________
consensus             GGCCTTGGGCCCGTATCGGGATCTTTCTCTTGCAAACTCAATGAATCAGATGTGATGCTT
 
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rJMSF033N18+          AGAAATATACCTATTCTGGTTATCCCAGCTGGTGTGCAACTTGTCACCTGTGGACATTCT
                      ____________________________________________________________
consensus             AGAAATATACCTATTCTGGTTATCCCAGCTGGTGTGCAACTTGTCACCTGTGGACATTCT
 
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rJMSF033N18+          CACACTTTAATTTCTACCAAGGATGGAAGAATTCATGGATGGGGTTACAATAGCTATGGT
rJMFF051L13+                           CAAGGATGGAAGAATTCATGGATGGGGTTACAATAGCTATGGT
                      ____________________________________________________________
consensus             CACACTTTAATTTCTACCAAGGATGGAAGAATTCATGGATGGGGTTACAATAGCTATGGT
 
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rJMSF033N18+          CAAGCGGCTAATGAGAAATCCACATATGCTTGGTATCCTTCGCCAGTTGATTGGTGTGTT
rJMFF051L13+          CAAGCGGCTAATGAGAAATCCACATATGCTTGGTATCCTTCGCCAGTTGATTGGTGTGTT
                      ____________________________________________________________
consensus             CAAGCGGCTAATGAGAAATCCACATATGCTTGGTATCCTTCGCCAGTTGATTGGTGTGTT
 
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rJMSF033N18+          GGAGAAGTCAGGAAGCTGGCAGCTGGTGGCGGCCATTCTGCAGTATTGACGGATGCATGT
rJMFF051L13+          GGAGAAGTCAGGAAGCTGGCAGCTGGTGGCGGCCATTCTGCAGTATTGACGGATGCATGT
                      ____________________________________________________________
consensus             GGAGAAGTCAGGAAGCTGGCAGCTGGTGGCGGCCATTCTGCAGTATTGACGGATGCATGT
 
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rJMSF033N18+          TCCTTGAAGGAGTTATGCGAGTTTCGACTTGCTGAAAGTGTCACTCCTGCTAATGCTTCT
rJMFF051L13+          TCCTTGAAGGAGTTATGCGAGTTTCGACTTGCTGAAAGTGTCACTCCTGCTAATGCTTCT
                      ____________________________________________________________
consensus             TCCTTGAAGGAGTTATGCGAGTTTCGACTTGCTGAAAGTGTCACTCCTGCTAATGCTTCT
 
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rJMSF033N18+          GAAATTGAGGATGTTGCTTCAAGAACAGGGTCTGATGCATTAGCTCGGCTCTGTGAAAGA
rJMFF051L13+          GAAATTGAGGATGTTGCTTCAAGAACAGGGTCTGATGCATTAGCTCGGCTCTGTGAAAGA
                      ____________________________________________________________
consensus             GAAATTGAGGATGTTGCTTCAAGAACAGGGTCTGATGCATTAGCTCGGCTCTGTGAAAGA
 
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rJMSF033N18+          TTAAGGGAGCAAATGCTTGATGGGGATGATCTGAGCTACAATGGCGATGAGTTTGATTGA
rJMFF051L13+          TTAAGGGAGCAAATGCTTGATGGGGATGATCTGAGCTACAATGGCGATGAGTTTGATTGA
                      ____________________________________________________________
consensus             TTAAGGGAGCAAATGCTTGATGGGGATGATCTGAGCTACAATGGCGATGAGTTTGATTGA
 
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rJMSF033N18+          TCTATGAAACCAGACATAGTAGAAGTGTAATATATCATTCATGAAGTGTATTACTATCAA
rJMFF051L13+          TCTATGAAACCAGACATAGTAGAAGTGTAATATATCATTCATGAAGTGTATTACTATCAA
                      ____________________________________________________________
consensus             TCTATGAAACCAGACATAGTAGAAGTGTAATATATCATTCATGAAGTGTATTACTATCAA
 
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rJMSF033N18+          TTGTATCTACCTGACTTGGGGATATTCTTGCTGTAATCCTACTAAAC             
rJMFF051L13+          TTGTATCTACCTGACTTGGGGATATTCTTGCTGTAATCCTACTAAACTGTATTATTTTAG
                      ____________________________________________________________
consensus             TTGTATCTACCTGACTTGGGGATATTCTTGCTGTAATCCTACTAAACTGTATTATTTTAG
 
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rJMFF051L13+          AAAAGTGAAAATTTGTGGATTTAAGCTCAAGAATATAATGCTACCTGAATCTTAGATCAC
                      ____________________________________________________________
consensus             AAAAGTGAAAATTTGTGGATTTAAGCTCAAGAATATAATGCTACCTGAATCTTAGATCAC