Contig 005573:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF051E20Sequence544006323 (7)ref|XP_009768689.1|3e-46PREDICTED: uncharacterized protein LOC104219681 isoform X2 [Nicotiana sylvestri438005573 (2)
JMSF021B17Sequence630006323 (7)ref|XP_009768690.1|1e-61PREDICTED: uncharacterized protein LOC104219681 isoform X3 [Nicotiana sylvestri780005573 (2)ref|XP_006347496.1|4e-54PREDICTED: uncharacterized protein LOC102581741 isoform X5 [Solanum tuberosum]

Alignment

This contig is upended


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rJMSF021B17+                                               GTTATTCAAATGATAAAGTAACA
                      ____________________________________________________________
consensus                                                  GTTATTCAAATGATAAAGTAACA
 
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rJMSF021B17+          GATGCCACCAAGAGTGCTGCTATGCCTGAAAGATTAGTTTCCGTGGGTCAGAAAAATGCA
                      ____________________________________________________________
consensus             GATGCCACCAAGAGTGCTGCTATGCCTGAAAGATTAGTTTCCGTGGGTCAGAAAAATGCA
 
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rJMSF021B17+          TATGCTGTTGGGAAGGCTGCAGAACCTGCTCTACTTGAAGAACAAGCATTACTCGCTTGC
                      ____________________________________________________________
consensus             TATGCTGTTGGGAAGGCTGCAGAACCTGCTCTACTTGAAGAACAAGCATTACTCGCTTGC
 
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rJMSF021B17+          ATAGTTCGCACAATTCCACCTGGTTCTAGTGGTAGAATTAGGATTAGTACAACGCTCCCA
                      ____________________________________________________________
consensus             ATAGTTCGCACAATTCCACCTGGTTCTAGTGGTAGAATTAGGATTAGTACAACGCTCCCA
 
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rJMSF021B17+          AATAGGCTTGGGAAAATGCTTTCTCCCCTTCATTGGCATGATTACAAGAGGAAGTATGGG
                      ____________________________________________________________
consensus             AATAGGCTTGGGAAAATGCTTTCTCCCCTTCATTGGCATGATTACAAGAGGAAGTATGGG
 
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rJMSF021B17+          AAACTTGATGAATTTGTAGCAAGTCATCCTGAATTATTTGTGATCAATGGAGACAACATT
                      ____________________________________________________________
consensus             AAACTTGATGAATTTGTAGCAAGTCATCCTGAATTATTTGTGATCAATGGAGACAACATT
 
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rJMSF021B17+          CAACTTCGAGAAGGTGCTCAAGAAATAATAGCAGCCACAGCAGCTGCAGCTAAAGTTGCT
                      ____________________________________________________________
consensus             CAACTTCGAGAAGGTGCTCAAGAAATAATAGCAGCCACAGCAGCTGCAGCTAAAGTTGCT
 
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rJMSF021B17+          GCGGCAGCTGCAGCCACATCATCTTATCCATCACGATTACCTTCTGTTGCTGTTACTCCC
                      ____________________________________________________________
consensus             GCGGCAGCTGCAGCCACATCATCTTATCCATCACGATTACCTTCTGTTGCTGTTACTCCC
 
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rJMSF021B17+          ATGGCTCAGTCACAGAGGCTGAAGACATCCTCACTTGAACCCACTTCTGGGAAGGACAAG
rJMFF051E20+                                                                GACAAG
                      ____________________________________________________________
consensus             ATGGCTCAGTCACAGAGGCTGAAGACATCCTCACTTGAACCCACTTCTGGGAAGGACAAG
 
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rJMSF021B17+          GTTCGAGCCCTTTTAAAGAATTCTATGACTGGTGGAGCTGTCAAATTTCCGGGCAATCAA
rJMFF051E20+          GTTCGAGCCCTTTTAAAGAATTTTATGACTGGTGGAGCTGTCAAATTTCCGGGCAATCAA
                      ____________________________________________________________
consensus             GTTCGAGCCCTTTTAAAGAATTTTATGACTGGTGGAGCTGTCAAATTTCCGGGCAATCAA
 
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rJMSF021B17+          ATTGGATGATTTGTACTTTGAAGGCAAAGTGTGACAATATTCTTACTCCCATGGTTGGAA
rJMFF051E20+          ATTGGATGATTTGTACTTTGAAGGCAAAGTGTGACAATATTCTTACTCCCATGGTTGGAA
                      ____________________________________________________________
consensus             ATTGGATGATTTGTACTTTGAAGGCAAAGTGTGACAATATTCTTACTCCCATGGTTGGAA
 
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rJMSF021B17+          GCAATTTCTGGTGGTGGGAGTATCATTTTCCTTTCTGTTGGATTTTCTGCCCATCTCTTT
rJMFF051E20+          GCAATTTCTGGTGGTGGGAGTATCATTTTCCTTTCTGTTGGATTTTCTGCCCATCTCTTT
                      ____________________________________________________________
consensus             GCAATTTCTGGTGGTGGGAGTATCATTTTCCTTTCTGTTGGATTTTCTGCCCATCTCTTT
 
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rJMSF021B17+          TTGTCTTGTCACTGCTTCCCCATGTCTGCTGTGACATTTCATTTTATGTAAAATGGGCAT
rJMFF051E20+          TTGTCTTGTCACTGCTTCCCCATGTCTGCTGTGACATTTCATTTTATGTAAAATGGGCAT
                      ____________________________________________________________
consensus             TTGTCTTGTCACTGCTTCCCCATGTCTGCTGTGACATTTCATTTTATGTAAAATGGGCAT
 
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rJMSF021B17+          CTTTTGGACATT                                                
rJMFF051E20+          CTTTTGGACATTTAAAACCTGCAAAGTTTTTCACCGTTATCTACAATCCAGTTGCAAACT
                      ____________________________________________________________
consensus             CTTTTGGACATTTAAAACCTGCAAAGTTTTTCACCGTTATCTACAATCCAGTTGCAAACT