| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF026K07 | Sequence | 571 | 005571 (12) | ref|XP_004296430.1| | 1e-19 | PREDICTED: protein GLUTAMINE DUMPER 3 [Fragaria vesca subsp. vesca] | 636 | 005571 (12) | ref|XP_004296430.1| | 2e-19 | PREDICTED: protein GLUTAMINE DUMPER 3 [Fragaria vesca subsp. vesca] |
| JMFF038A21 | Sequence | 438 | 005571 (12) | ref|XP_004296430.1| | 5e-18 | PREDICTED: protein GLUTAMINE DUMPER 3 [Fragaria vesca subsp. vesca] | 587 | 005571 (12) | ref|XP_004296430.1| | 2e-19 | PREDICTED: protein GLUTAMINE DUMPER 3 [Fragaria vesca subsp. vesca] |
| JMFF048B10 | Sequence | 389 | 005571 (12) | ref|XP_004296430.1| | 5e-09 | PREDICTED: protein GLUTAMINE DUMPER 3 [Fragaria vesca subsp. vesca] | 280 | 005571 (12) | |||
| JMFF051D14 | Sequence | 466 | 005571 (12) | gb|EYU42448.1| | 2e-22 | hypothetical protein MIMGU_mgv1a015268mg [Erythranthe guttata] | 306 | 005571 (12) | |||
| JMFN019L22 | Sequence | 499 | 005571 (12) | ref|XP_004296430.1| | 9e-20 | PREDICTED: protein GLUTAMINE DUMPER 3 [Fragaria vesca subsp. vesca] | |||||
| JMSF002P19 | Sequence | 267 | 005571 (12) | 632 | 005571 (12) | ref|XP_004296430.1| | 2e-19 | PREDICTED: protein GLUTAMINE DUMPER 3 [Fragaria vesca subsp. vesca] | |||
| JMSF003P19 | Sequence | 610 | 005571 (12) | ref|XP_004296430.1| | 1e-19 | PREDICTED: protein GLUTAMINE DUMPER 3 [Fragaria vesca subsp. vesca] | |||||
This contig is upended
. : . : . : . : . : . :
JMSF002P19- GAATCCACTCTTCTTCTCTCCTCCTCCTCC
JMFF026K07- TCCACTCTTCTTCTCTCCTCCTCCTCC
JMFN019L22- TCTCCTCCTCCTCC
rJMSF002P19+ TCCACTNTTCTTCTCTCCTCCTCCTCC
JMFF048B10- ACTCTTCTTCTCTCCTCCTCCTCC
JMFF051D14- ACTCTTCTTCTCTCCTCCTCCTCC
JMFF038A21- CACTCTTCTTCTCTCCTCCTCCTCC
rJMSF003P19+ CACTCTTCTTCTCTCCTCCTCCTCC
rJMFF026K07+ TCCACTCTTCTTCTCTCCTCCTCCTCC
____________________________________________________________
consensus GAATCCACTCTTCTTCTCTCCTCCTCCTCC
. : . : . : . : . : . :
JMSF002P19- TCAACCTCCACCGTCTCCTCCACCACCACGGTGGCGCTAATTTCAACTCTCGACTAAAAG
JMFF026K07- TCAACCTCCACCGTCTCCTCCACCACCACGGTGGCGCTAATTTCAACTCTCGACTAAAAG
JMFN019L22- TCAACCTCCACCGTCTCCTCCACCACCACGGTGGCGCTAATTTCAACTCTCGACTAAAAG
rJMSF002P19+ TCAACCTCCACCGTCTCCTCCACCACCACGGTGGCGCTAATTTCAACTCTCGACTAAAAG
JMFF048B10- TCAACCTCCACCGTCTCCTCCACCACCACGGTGGCGCTAATTTCAACTCTCGACTAAAAG
JMFF051D14- TCAACCTCCACCGTCTCCTCCACCACCACGGTGGCGCTAATTTCAACTCTCGACTAAAAG
JMFF038A21- TCAACCTCCACCGTCTCCTCCACCACCACGGTGGCGCTAATTTCAACTCTCGACTAAAAG
rJMSF003P19+ TCAACCTCCACCGTCTCCTCCACCACCACGGTGGCGCTAATTTCAACTCTCGACTAAAAG
rJMFF026K07+ TCAACCTCCACCGTCTCCTCCACCACCACGGTGGCGCTAATTTCAACTCTCGACTAAAAG
rJMFF038A21+ CACGGTGGCGNTAATTTCAACTGTCGACTAAAAG
____________________________________________________________
consensus TCAACCTCCACCGTCTCCTCCACCACCACGGTGGCGCTAATTTCAACTCTCGACTAAAAG
. : . : . : . : . : . :
JMSF002P19- CAAAGAATTCAATTCATCACGTAGTCCTCTGCTAAGATGAGAACCTTGGAAGGTTCATCA
JMFF026K07- CAAAGAATTCAATTCATCGCGTAGTCCTCTGCTAAGATGAGAACCTTGGAAGGTTCATCA
JMFN019L22- CAAAGAATTCAATTCATCACGTAGTCCTCTGCTAAGATGAGAACCTTGGAAGGTTCATCA
rJMSF002P19+ CAAAGAATTCAATTCATCACGTAGTCCTCTGCTAAGATGAGAACCTTGGAAGGTTCATCA
JMFF048B10- CAAAGAATTCAATTCATCACGTAGTCCTCTGCTAAGATGAGAACCTTGGAAGGTTCATCA
JMFF051D14- CAAAGAATTCAATTCATCACGTAGTCCTCTGCTAAGATGAGAACCTTGGAAGGTTCATCA
JMFF038A21- CAAAGAATTCAATTCATCACGTAGTCCTCTGCTAAGATGAGAACCTTGGAAGGTTCATCA
rJMSF003P19+ CAAAGAATTCAATTCATCACGTAGTCCTCTGCTAAGATGAGAACCTTGGAAGGTTCATCA
rJMFF026K07+ CAAAGAATTCAATTCATCGCGTAGTCCTCTGCTAAGATGAGAACCTTGGAAGGTTCATCA
rJMFF038A21+ CAAAGAATTCAATTCATCACGTAGTCCTCTGCTAAGATGAGAACCTTGGAAGGTTCATCA
____________________________________________________________
consensus CAAAGAATTCAATTCATCACGTAGTCCTCTGCTAAGATGAGAACCTTGGAAGGTTCATCA
. : . : . : . : . : . :
JMSF002P19- GCTCCGGCGCCAACATCTCCGGTGGCTACCTCTCCGTGGCACTCGCCGGTGCCGTACCTT
JMFF026K07- GCTCCGGCGCCAACATCTCCGGTGGCTACCTCTCCGTGGCACTCGCCGGTGCCGTACCTT
JMFN019L22- GCTCCGGCGCCAACATCTCCGGTGGCTACCTCTCCGTGGCACTCGCCGGTGCCGTACCTT
rJMSF002P19+ GCTCCGGCGCCAACATCTCCGGTGGCTACCTCTCCGTGGCACTCGCCGGTGCCGTACCTT
JMFF048B10- GCTCCGGCGCCAACATCTCCGGTGGCTACCTCTCCGTGGCACTCGCCGGTGCCGTACCTT
JMFF051D14- GCTCCGGCGCCAACATCTCCGGTGGCTACCTCTCCGTGGCACTCGCCGGTGCCGTACCTT
JMFF038A21- GCTCCGGCGCCAACATCTCCGGTGGCTACCTCTCCGTGGCACTCGCCGGTGCCGTACCTT
rJMSF003P19+ GCTCCGGCGCCAACATCTCCGGTGGCTACCTCTCCGTGGCACTCGCCGGTGCCGTACCTT
rJMFF026K07+ GCTCCGGCGCCAACATCTCCGGTGGCTACCTCTCCGTGGCACTCGCCGGTGCCGTACCTT
rJMFF038A21+ GCTCCGGCGCCAACATCTCCGGTGGCTACCTCTCCGTGGCACTCGCCGGTGCCGTACCTT
____________________________________________________________
consensus GCTCCGGCGCCAACATCTCCGGTGGCTACCTCTCCGTGGCACTCGCCGGTGCCGTACCTT
. : . : . : . : . : . :
JMSF002P19- TTCGGCGGGCTGGCCGCCATGCTCGGCCTAATTGCTTTTGCGCTACTCATCCTCGCC
JMFF026K07- TTCGGCGGGCTGGCCGCCATGCTCGGCCTAATTGCTTTTGCGCTACTCATCCTCGCCTGC
JMFN019L22- TTCGGCGGGCTGGCCGCCATGCTCGGCCTAATTGCTTTTGCGCTACTCATCCTCGCCTGC
rJMSF002P19+ TTCGGCGGGCTGGCCGCCATGCTCGGCCTAATTGCTTTTGCGCTACTCATCCTCGCCTGC
JMFF048B10- TTCGGCGGGCTGGCCGCCATGCTCGGCCTAATTGCTTTTGCGCTACTCATCCTCGCCTGC
JMFF051D14- TTCGGCGGGCTGGCCGCCATGCTCGGCCTAATTGCTTTTGCGCTACTCATCCTCGCCTGC
JMFF038A21- TTCGGCGGGCTGGCCGCCATGCTCGGCCTAATTGCTTTTGCGCTACTCATCCTCGCCTGC
rJMSF003P19+ TTCGGCGGGCTGGCCGCCATGCTCGGCCTAATTGCTTTTGCGCTACTCATCCTCGCCTGC
rJMFF026K07+ TTCGGCGGGCTGGCCGCCATGCTCGGCCTAATTGCTTTTGCGCTACTCATCCTCGCCTGC
rJMFF038A21+ TTCGGCGGGCTGGCCGCCATGCTCGGCCTAATTGCTTTTGCGCTACTCATCCTCGCCTGC
____________________________________________________________
consensus TTCGGCGGGCTGGCCGCCATGCTCGGCCTAATTGCTTTTGCGCTACTCATCCTCGCCTGC
. : . : . : . : . : . :
JMFF026K07- TCTTACTGGCGCCTCTCCGGCTACCTCGAGAACAGCGCCGACAGCGACGGCAGGGATCTC
JMFN019L22- TCTTACTGGCGCCTCTCCGGCTACCTCGAGAACAGCGCCGACAGCGACGGCAGGGATCTC
rJMSF002P19+ TCTTACTGGCGCCTCTCCGGCTACCTCGAGAACAGCGCCGACAGCGACGGCAGGGATCTC
JMFF048B10- TCTTACTGGCGCCTCTCCGGCTACCTCGAGAACAGCGCCGACAGCGACGGCAGGGATCTC
JMFF051D14- TCTTACTGGCGCCTCTCCGGCTACCTCGAGAACAGCGCCGACAGCGACGGCAGGGATCTC
JMFF038A21- TCTTACTGGCGCCTCTCCGGCTACCTCGAGAACAGCGCCGACAGCGACGGCAGGGATCTC
rJMSF003P19+ TCTTACTGGCGCCTCTCCGGCTACCTCGAGAACAGCGCCGACAGCGACGGCAGGGATCTC
rJMFF026K07+ TCTTACTGGCGCCTCTCCGGCTACCTCGAGAACAGCGCCGACAGCGACGGCAGGGATCTC
rJMFF038A21+ TCTTACTGGCGCCTCTCCGGCTACCTCGAGAACAGCGCCGACAGCGACGGCAGGGATCTC
____________________________________________________________
consensus TCTTACTGGCGCCTCTCCGGCTACCTCGAGAACAGCGCCGACAGCGACGGCAGGGATCTC
. : . : . : . : . : . :
JMFF026K07- GAGGTCGGAGAGGGTAGTGGCGACGGCGAAAAGAAGGCGGCGGCGGCGCCGGTGTTGGAA
JMFN019L22- GAGGTCGGAGAGGGTAGTGGCGACGGCGAAAAGAAGGCGGCGGCGGCGCCGGTGTTGGAA
rJMSF002P19+ GAGGTCGGAGAGGGTAGTGGCGACGGCGAAAAGAAGGCGGCGGCGGCGCCGGTGTTGGAA
JMFF048B10- GAGGTCGGAGAGGGTAGTGGCGACGGCGAAAAGAAGGCGGCGGCGGCGCCGGTGTTGGAA
JMFF051D14- GAGGTCGGAGAGGGTAGTGGCGACGGCGAAAAGAAGGCGGCGGCGGCGCCGGTGTTGGAA
JMFF038A21- GAGGTCGGAGAGGGTAGTGGCGACGGCGAAAAGAAGGCGGCGGCGGCGCCGGTGTTGGAA
rJMSF003P19+ GAGGTCGGAGAGGGTAGTGGCGACGGCGAAAAGAAGGCGGCGGCGGCGCCGGTGTTGGAA
rJMFF026K07+ GAGGTCGGAGAGGGTAGTGGCGACGGCGAAAAGAAGGCGGCGGCGGCGCCGGTGTTGGAA
rJMFF038A21+ GAGGTCGGAGAGGGTAGTGGCGACGGCGAAAAGAAGGCGGCGGCGGCGCCGGTGTTGGAA
____________________________________________________________
consensus GAGGTCGGAGAGGGTAGTGGCGACGGCGAAAAGAAGGCGGCGGCGGCGCCGGTGTTGGAA
. : . : . : . : . : . :
JMFF026K07- GAGAAGTTTCTGGTGATCATGGCCGGTGAAGAGAAGCCCACTTTTATCGCCACGGCGATA
JMFN019L22- GAGAAGTTTCTGGTGATCATGGCCGGTGAAGAGAAGCCCACTTTTATCGCCACGGCGATA
rJMSF002P19+ GAGAAGTTTCTGGTGATCATGGCCGGTGAAGAGAAGCCCACTTTTATCGCCACGGCGATA
JMFF051D14- GAGAAGTTTCTGGTGATCATGGCCGGTGAAGAGAAGCCCACTTTTATCGCCACGGCGATA
JMFF038A21- GAGAAGTTTCTGGTGATCATGGCCGGTGAAGAGAAGCCCACTTTTATCG
rJMSF003P19+ GAGAAGTTTCTGGTGATCATGGCCGGTGAAGAGAAGCCCACTTTTATCGCCACGGCGATA
rJMFF026K07+ GAGAAGTTTCTGGTGATCATGGCCGGTGAAGAGAAGCCCACTTTTATCGCCACGGCGATA
rJMFF038A21+ GAGAAGTTTCTGGTGATCATGGCCGGTGAAGAGAAGCCCACTTTTATCGCCACGGCGATA
rJMFF051D14+ GCGATA
____________________________________________________________
consensus GAGAAGTTTCTGGTGATCATGGCCGGTGAAGAGAAGCCCACTTTTATCGCCACGGCGATA
. : . : . : . : . : . :
JMFF026K07- TCGAGTAGAGCGTCGTCTTTTGGAAGTAAAAGCAGTAGTACTCTGAGCAGTGAAAGTAGT
JMFN019L22- TCGAGTAGAGCGTCGTCTTTTGGAAGTAAAAGCAGTAGTACTCTGAGCAGTGAAAGTAGT
rJMSF002P19+ TCGAGTAGAGCGTCGTCTTTTGGAAGTAAAAGCAGTAGTACTCTGAGCAGTGAAAGTAGT
JMFF051D14- TCGAGTAGAGCGTCGTC
rJMSF003P19+ TCGAGTAGAGCGTCGTCTTTTGGAAGTAAAAGCAGTAGTACTCTGAGCAGTGAAAGTAGT
rJMFF026K07+ TCGAGTAGAGCGTCGTCTTTTGGAAGTAAAAGCAGTAGTACTCTGAGCAGTGAAAGTAGT
rJMFF038A21+ TCGAGTAGAGCGTCGTCTTTTGGAAGTAAAAGCAGTAGTACTCTGAGCAGTGAAAGTAGT
rJMFF048B10+ TGGAAGTAAAAGCAGTAGTACTCTGAGCAGTGAAAGTAGT
rJMFF051D14+ TCGAGTAGAGCGTCGTCTTTTGGAAGTAAAAGCAGTAGTACTCTGAGCAGTGAAAGTAGT
____________________________________________________________
consensus TCGAGTAGAGCGTCGTCTTTTGGAAGTAAAAGCAGTAGTACTCTGAGCAGTGAAAGTAGT
. : . : . : . : . : . :
JMFF026K07- ACCCTCGAGAAATCCGAGGGAGAAGAGAATGAAGAGAAGAAGCAGGATGACAACGTTAGC
JMFN019L22- ACCCT
rJMSF002P19+ ACCCTCGAGAAATCCGAGGGAGAAGAGAATGAAGAGAAGAAGCAGGATGACAACGTTAGC
rJMSF003P19+ ACCCTCGAGAAATCCGAGGGAGAAGAGAATGAAGAGAAGAAGCAGGATGACAACGTTAGC
rJMFF026K07+ ACCCTCGAGAAATCCGAGGGAGAAGAGAATGAAGAGAAGAAGCAGGATGACAACGTTAGC
rJMFF038A21+ ACCCTCGAGAAATCCGAGGGAGAAGAGAATGAAGAGAAGAAGCAGGATGACAACGTTAGC
rJMFF048B10+ ACCCTCGAGAAATCCGAGGGAGAAGAGAATGAAGAGAAGAAGCAGGATGACAACGTTAGC
rJMFF051D14+ ACCCTCGAGAAATCCGAGGGAGAAGAGAATGAAGAGAAGAAGCAGGATGACAACGTTAGC
____________________________________________________________
consensus ACCCTCGAGAAATCCGAGGGAGAAGAGAATGAAGAGAAGAAGCAGGATGACAACGTTAGC
. : . : . : . : . : . :
JMFF026K07- CA
rJMSF002P19+ CAGGTGCAAATGGGGGCTGTGGGCCCCC
rJMSF003P19+ CAGGTGCAAATGGGGGCTGTGGGCCCCCAGGGAACAGATC
rJMFF026K07+ CAGGTGCAAATGGGGGCTGTGGGCCCCCAGGGAACAGATCATCTTTCTCCAAATTAA
rJMFF038A21+ CAGGTGCAAATGGGGGCTGTGGGCCCCCAGGGAACAGATCATCTTTCTCCAAATTAA
rJMFF048B10+ CAGGTGCAAATGGGGGCTGTGGGCCCCCAGGGAACAGATCATCTTTCTCCAAATTAATCC
rJMFF051D14+ CAGGTGCAAATGGGGGCTGTGGGCCCCCAGGGAACAGATCATCTTTCTCCAAATTAATCC
____________________________________________________________
consensus CAGGTGCAAATGGGGGCTGTGGGCCCCCAGGGAACAGATCATCTTTCTCCAAATTAATCC
. : . : . : . : . : . :
rJMFF048B10+ TCTTTCCAATTTTCTTCCAATCTTC
rJMFF051D14+ TCTTTCCAATTTTCTTCCAATCTTCXXXXXXXXXXXXXXXXXXXXXXXXGAAGAAGAAGG
____________________________________________________________
consensus TCTTTCCAATTTTCTTCCAATCTTCNNNNNNNNNNNNNNNNNNNNNNNNGAAGAAGAAGG
. : . : . : . : . : . :
rJMFF051D14+ TGAAAGGATCATTTGGGATTATCAATATAGTTCTTGAGGGCAAAAATCAAGAACCAAAAT
____________________________________________________________
consensus TGAAAGGATCATTTGGGATTATCAATATAGTTCTTGAGGGCAAAAATCAAGAACCAAAAT