Contig 005570:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS018F10-                              ACATTCACGCCTAACCCACATCAGACTTCACCATTTTCAAC
JMFF003B15-                                                              ATTTTCAAC
                      ____________________________________________________________
consensus                                ACATTCACGCCTAACCCACATCAGACTTCACCATTTTCAAC
 
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JMFS018F10-           ATTCTCTCTCTATCTCTCTGTCGCCCATCTCTCTATCTATTACCATGGCGTGAGTCTTGC
JMFF003B15-           ATTCTCTCTCTATCTCTCTGTCGCCCATCTCTCTATCTATTACCATGGCGTGAGTCTTGC
rJMFF003B15+                                                    CCATGGCGTGAGTCTTGC
                      ____________________________________________________________
consensus             ATTCTCTCTCTATCTCTCTGTCGCCCATCTCTCTATCTATTACCATGGCGTGAGTCTTGC
 
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JMFS018F10-           TTTCCTAACATCAAAACATCACAAATCTTTGCTTCTTCAGCGATTCATTTGCTCCATCGC
JMFF003B15-           TTTCCTAACATCAAAACATCACAAATCTTTGCTTCTTCAGCGATTCATTTGCTCCATCGC
rJMFF003B15+          TTTCCTAACATCAAAACATCACAAATCTTTGCTTNTTCAGCGATTCATTTGCTCCATCGC
                      ____________________________________________________________
consensus             TTTCCTAACATCAAAACATCACAAATCTTTGCTTCTTCAGCGATTCATTTGCTCCATCGC
 
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JMFS018F10-           TAAAAAGGCACTCCTCAGATCCATCTGCGATTTCTTCCGCCAGCTTCCATTTCAGTGATT
JMFF003B15-           TAAAAAGGCACTCCTCAGATCCATCTGCGATTTCTTCCGCCAGCTTCCATTTCAGTGATT
rJMFF003B15+          TAAAAAGGCACTCCTCAGATCCATTTGCGATTTNTTCCGCCAGCTTCCATTTCAGTGATT
                      ____________________________________________________________
consensus             TAAAAAGGCACTCCTCAGATCCATCTGCGATTTCTTCCGCCAGCTTCCATTTCAGTGATT
 
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JMFS018F10-           CATTCTCCATTTCTTCCGCCAGCTTCCATTTCAACGATTCATTCTCCATTTCTTCCACCA
JMFF003B15-           CATTCTCCATTTCTTCCGCCAGCTTCCATTTCAACGATTCATTCTCCATTTCTTCCACCA
rJMFF003B15+          CATTNTCCATTTNTTCCGCCAGCTTCCATTTCAACGATTCATTNTCCATTTNTTCCNCCA
                      ____________________________________________________________
consensus             CATTCTCCATTTCTTCCGCCAGCTTCCATTTCAACGATTCATTCTCCATTTCTTCCACCA
 
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JMFS018F10-           GCTGCTGTACTACCGCGACGAATTCGGCGACCGCGCTTACATCTCCGGTCGATCCGCAAC
JMFF003B15-           GCTGCTGTACTACCGCGACGAATTCGGCGACCGCGCTTACATCTCCGGTCGATCCGCAAC
rJMFF003B15+          GCTGCTGTACTACCGCGACGAATTCGGCGACCGCGCTTACATNTCCGGTCGATCCGCAAC
                      ____________________________________________________________
consensus             GCTGCTGTACTACCGCGACGAATTCGGCGACCGCGCTTACATCTCCGGTCGATCCGCAAC
 
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JMFS018F10-           GCTTACATCGCTATCCAGGCCTGGAAGCAGGCCATCTCAGATCCGGTGGCAGAAATCCAG
JMFF003B15-           GCTTACATCGCTATCCAGGCCTGGAAGCAGGCCATCTCAGATCCGGTGGCAGAAATCCAG
rJMFF003B15+          GCTTACATCGCTATCCAGGCCNGGAAGCAGGCCATNTCAGATCCGGTGGCAGAAATCCAG
                      ____________________________________________________________
consensus             GCTTACATCGCTATCCAGGCCTGGAAGCAGGCCATCTCAGATCCGGTGGCAGAAATCCAG
 
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JMFS018F10-           ATCCGGTGGCGGAGTGCTCAGATCTGGTGGCAGAGAGCTCACGGAGGATGGTCGCCGGCT
JMFF003B15-           ATCCGGTGGCGGAGTGCTCAGATCTGGTGGCAGAGAGCTCACGGAGGATGGTCGCCGGCT
rJMFF003B15+          ATCCGGTGGCGGAGTGCTCAGATNTGGTGGCAGAGAGCTCACGGAGGATGGTCGCCGGCT
                      ____________________________________________________________
consensus             ATCCGGTGGCGGAGTGCTCAGATCTGGTGGCAGAGAGCTCACGGAGGATGGTCGCCGGCT
 
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JMFS018F10-           TCTCTTCCATTTCCGATGCACAGAGCTCAGGATGGGTTGAAGATACTGAAAAGAGGAGAT
JMFF003B15-           TCTCTTCCATTTCCGATGCACAGAGCTCAGGATGGGTTGAAGATACTGAAAAGAGGAGAT
rJMFF003B15+          TNTNTTCCATTTCCGATGCACAGAGCTCAGGATGGGTTGAAGATACTGAAAAGAGGAGAT
rJMFF051C13+                                             GTTGAAGATACTGAAAAGAGGAGAT
                      ____________________________________________________________
consensus             TCTCTTCCATTTCCGATGCACAGAGCTCAGGATGGGTTGAAGATACTGAAAAGAGGAGAT
 
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JMFS018F10-           ACTATAATGGCTATGGATCCAAGATTACAAAGAAGTCCAGCTTCCGTTGAGGC       
JMFF003B15-           ACTATAATGGCTATGGATCCAAGATTACAAAGAAGTCCAGCTTCCGTTGAGGC       
rJMFF003B15+          ACTATAATGGCTATGGATCCAAGATTACAAAGAAGTCCAGCTTCCGTTGAGGC       
rJMFF051C13+          ACTGTAATGGCTATGGATCCAAGATTACGAAGAAGTCCAGCTTCCGTTGAGGCAGTGGAG
                      ____________________________________________________________
consensus             ACTATAATGGCTATGGATCCAAGATTACAAAGAAGTCCAGCTTCCGTTGAGGCAGTGGAG
 
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rJMFF051C13+          AAGGTACTTAAAGTGGCACATCTATGTGTTGCGCCTTCAAGATCGGGAAGGCCATCCATG
                      ____________________________________________________________
consensus             AAGGTACTTAAAGTGGCACATCTATGTGTTGCGCCTTCAAGATCGGGAAGGCCATCCATG
 
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rJMFF051C13+          AGAAAATGTGCAGAGGTGCTATGGAGAGTTAGGAAAGAATTCAGAGATCGAAGTGTACAT
                      ____________________________________________________________
consensus             AGAAAATGTGCAGAGGTGCTATGGAGAGTTAGGAAAGAATTCAGAGATCGAAGTGTACAT
 
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rJMFF051C13+          TCCAGTGCTGCTGCTTCTGCATCTTACTACACAGCTTTTGTAGGGAAAAATTCCCCCACG
                      ____________________________________________________________
consensus             TCCAGTGCTGCTGCTTCTGCATCTTACTACACAGCTTTTGTAGGGAAAAATTCCCCCACG
 
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rJMFF051C13+          CCCAGTGTTGATTTTAGCGATAAACTTAAGTTTGCTTCTGCTTAAACAACCCTCATTATT
                      ____________________________________________________________
consensus             CCCAGTGTTGATTTTAGCGATAAACTTAAGTTTGCTTCTGCTTAAACAACCCTCATTATT
 
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rJMFF051C13+          TGTTTGTACTGAAAACACTTGTAAGAAAAGGCTATGCCAACAACACACAAAAATACTAAA
                      ____________________________________________________________
consensus             TGTTTGTACTGAAAACACTTGTAAGAAAAGGCTATGCCAACAACACACAAAAATACTAAA
 
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rJMFF051C13+          TAAAATAATTATTGAGGACAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG
                      ____________________________________________________________
consensus             TAAAATAATTATTGAGGACAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG