Contig 005568:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF020F24Sequence229011812 (4)299005568 (3)ref|XP_009766354.1|7e-11PREDICTED: target of Myb protein 1-like [Nicotiana sylvestris]
JMFF033M17Sequence229011812 (4)298005568 (3)ref|XP_009766354.1|6e-10PREDICTED: target of Myb protein 1-like [Nicotiana sylvestris]
JMFF050N14Sequence625011812 (4)ref|XP_006366880.1|1e-43PREDICTED: TOM1-like protein 2-like [Solanum tuberosum]602005568 (3)ref|XP_010256972.1|2e-07PREDICTED: target of Myb protein 1-like isoform X1 [Nelumbo nucifera]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF033M17+ TATACAC
rJMFF020F24+ TGGCTATACAC
                      ____________________________________________________________
consensus TGGCTATACAC
 
. : . : . : . : . : . :
rJMFF033M17+ CACCCTGGGCTCCAACTCCAGGCTATTTCAGCCAATCAAACCAATCATTCCCCCCACTTT
rJMFF020F24+ CACCCTGGGCTCCAACTCCAGGCTATTTCAGCCAATCAAACCAATCATTCCCCCCACTTT
rJMFF050N14+ TTT
                      ____________________________________________________________
consensus CACCCTGGGCTCCAACTCCAGGCTATTTCAGCCAATCAAACCAATCATTCCCCCCACTTT
 
. : . : . : . : . : . :
rJMFF033M17+ ACATGTACTCATCAACCCCACAAACCACCCGCCACGAGCTCATCTTCTCCTCACCTCCCG
rJMFF020F24+ ACATGTACTCATCAACCCCAC-AACCACCCGCCACGAGCTCATCTTCTCCTCACCTCCCG
rJMFF050N14+ ACATGTACTCATCAACCCCAC-AACCACCCGCCACGAGCTCATTTTCTCCTCACCTCCCG
                      ____________________________________________________________
consensus ACATGTACTCATCAACCCCAC-AACCACCCGCCACGAGCTCATCTTCTCCTCACCTCCCG
 
. : . : . : . : . : . :
rJMFF033M17+ GCCAACTCGTTCCCAGCTATGGGAAACAATGGGAATGCACAAGTCAGCGCCACAACGGGT
rJMFF020F24+ GCCAACTCGTTCCCAGCTATGGGAAACAATGGGAATGCACAAGTCAGCGCCACAACGGGT
rJMFF050N14+ GCCAACTCGTTCCCAGCTATGGGAAACAATGGGAATGCACAAGTCAGCGCCACAACGGGT
                      ____________________________________________________________
consensus GCCAACTCGTTCCCAGCTATGGGAAACAATGGGAATGCACAAGTCAGCGCCACAACGGGT
 
. : . : . : . : . : . :
rJMFF033M17+ CTCTCCTCTCCTGAACAGAAGTCTTTCATCCCACCATACAGGCTGTTTGAAGATCTTAAT
rJMFF020F24+ CTCTCCTCTCCTGAACAGAAGTCTTTCATCCCACCATACAGGCTGTTTGAAGATCTTAAT
rJMFF050N14+ CTCTCCTCTCCTGAACAGAAGTCTTTCATCCCACCATACAGGCTGTTTGAAGATCTTAAT
                      ____________________________________________________________
consensus CTCTCCTCTCCTGAACAGAAGTCTTTCATCCCACCATACAGGCTGTTTGAAGATCTTAAT
 
. : . : . : . : . : . :
rJMFF033M17+ GTTTTGGTTAAGGGAGATCATCAGTATCCTAAGGCAACAGGCAACCCA
rJMFF020F24+ GTTTTGGTTAAGGGAGATCATCAGTATCCTAAGGCAACAGGCAACCCA
rJMFF050N14+ GTTTTGGTTAAGGGAGATCATCAGTATCCTAAGACAACAGGCAACCCAGCATACAATTTG
                      ____________________________________________________________
consensus GTTTTGGTTAAGGGAGATCATCAGTATCCTAAGGCAACAGGCAACCCAGCATACAATTTG
 
. : . : . : . : . : . :
rJMFF050N14+ TTTGGAGCAAACAGTCATAATATCATTGATTTGCGCAAATGAGATGATTGATAGGGAATA
                      ____________________________________________________________
consensus TTTGGAGCAAACAGTCATAATATCATTGATTTGCGCAAATGAGATGATTGATAGGGAATA
 
. : . : . : . : . : . :
rJMFF050N14+ TACAACAACATATTACAAGCTTTACATGATCTGCTGGCTGGCCTTTTTCAAGTTTATTTT
                      ____________________________________________________________
consensus TACAACAACATATTACAAGCTTTACATGATCTGCTGGCTGGCCTTTTTCAAGTTTATTTT
 
. : . : . : . : . : . :
rJMFF050N14+ GTAGGTGGAATTTTGGAATAACTATGATTTAGTTGTTATTGTAGCCATGCAATTACTTTG
                      ____________________________________________________________
consensus GTAGGTGGAATTTTGGAATAACTATGATTTAGTTGTTATTGTAGCCATGCAATTACTTTG
 
. : . : . : . : . : . :
rJMFF050N14+ TGTGCAGGCAGCAAGCTAATAGAGATATTTTATGCTTTTTAGGTTTTACTATTCATCAGC
                      ____________________________________________________________
consensus TGTGCAGGCAGCAAGCTAATAGAGATATTTTATGCTTTTTAGGTTTTACTATTCATCAGC
 
. : . : . : . : . : . :
rJMFF050N14+ TATATATTGTACTTTCATTTATTTCTTTTTAAATAATATCATTAACTTAAGTCTTTAGAG
                      ____________________________________________________________
consensus TATATATTGTACTTTCATTTATTTCTTTTTAAATAATATCATTAACTTAAGTCTTTAGAG
 
. : . : . : . : . : . :
rJMFF050N14+ TATAAGGTCTTCACTTGGAAGATACATGCTTATCACTAATAATAAATGGTTCAATTTTGG
                      ____________________________________________________________
consensus TATAAGGTCTTCACTTGGAAGATACATGCTTATCACTAATAATAAATGGTTCAATTTTGG