Contig 005567:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF003P07Sequence464001699 (4)ref|XP_009763526.1|3e-50PREDICTED: GDSL esterase/lipase At5g55050-like [Nicotiana sylvestris]722005567 (4)ref|XP_009629303.1|1e-83PREDICTED: GDSL esterase/lipase At5g55050-like [Nicotiana tomentosiformis]
JMFF028B16Sequence593001699 (4)ref|XP_009629303.1|5e-73PREDICTED: GDSL esterase/lipase At5g55050-like [Nicotiana tomentosiformis]696005567 (4)ref|XP_009629303.1|5e-84PREDICTED: GDSL esterase/lipase At5g55050-like [Nicotiana tomentosiformis]
JMFF038I24Sequence141001699 (4)699005567 (4)ref|XP_009629303.1|5e-84PREDICTED: GDSL esterase/lipase At5g55050-like [Nicotiana tomentosiformis]
JMFF050K10Sequence596001699 (4)ref|XP_009629303.1|4e-70PREDICTED: GDSL esterase/lipase At5g55050-like [Nicotiana tomentosiformis]589005567 (4)ref|XP_009763526.1|2e-59PREDICTED: GDSL esterase/lipase At5g55050-like [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMFF028B16+                                                                   TCA
rJMFF038I24+                                                                   TCA
rJMFF003P07+                                                        CTTCNTCATTTTCA
                      ____________________________________________________________
consensus                                                           CTTCNTCATTTTCA
 
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rJMFF028B16+          TCGGAAGCAATGATCTCATCAACTACTTCAACTCCGATTCCAAGCTCCCCAACACCACTC
rJMFF038I24+          TCGGAAGCAATGATCTCATCAACTACTTCAACTCCGATTCCAAGCTCCCCAACACCACTC
rJMFF003P07+          TCGGAAGCAATGATNTCATCAANTACTTCAACTCCGATTCCAAGCTCCCCAACACCACTC
                      ____________________________________________________________
consensus             TCGGAAGCAATGATCTCATCAACTACTTCAACTCCGATTCCAAGCTCCCCAACACCACTC
 
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rJMFF028B16+          CGCCGCAACAATTCGTTGATCAGATGACTGCCACCCTCAAACCCTACTTACAACAATTGC
rJMFF038I24+          CGCCGCAACAATTCGTTGATCAGATGACTGCCACCCTCAAACCCTACTTACAACAATTGC
rJMFF003P07+          CGCCGCAACAATTCGTTGATCAGATGACTGCCACCCTCAAACCCTACTTACAACAATTGC
                      ____________________________________________________________
consensus             CGCCGCAACAATTCGTTGATCAGATGACTGCCACCCTCAAACCCTACTTACAACAATTGC
 
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rJMFF028B16+          ACGGTTTGGGGGCACGTAAATTTGTGATTCCGGGAGTGCCGGCGATCGGATGCATGCCGT
rJMFF038I24+          ACGGTTTGGGGGCACGTAAATTTGTGATTCCGGGAGTGCCGGCGATCGGATGCATGCCGT
rJMFF003P07+          ACGGTTTGGGGGCACGTAAATTTGTGATTCCGGGAGTGCCGGCGATCGGATGCATGCCGT
rJMFF050K10+                     GCACGTAAATTTGTGATTCCGGGAGTGCCGGCGATCGGATGCATGCCGT
                      ____________________________________________________________
consensus             ACGGTTTGGGGGCACGTAAATTTGTGATTCCGGGAGTGCCGGCGATCGGATGCATGCCGT
 
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rJMFF028B16+          TGCTGCGGCACCGGCACCCGAACAAAACCGGGGAGTGCCTCGACGGAGCAAATTACTGGG
rJMFF038I24+          TGCTGCGGCACCGGCACCCGAACAAAACCGGGGAGTGCCTCGACGGAGCAAATTACTGGG
rJMFF003P07+          TGCTGCGGCACCGGCACCCGAACAAAACCGGGGAGTGCCTCGACGGAGCAAATTACTGGG
rJMFF050K10+          TGCTGCGGCACCGGCACCCGAACAAAACCGGGGAGTGCCTCGACGGAGCAAATTACTGGG
                      ____________________________________________________________
consensus             TGCTGCGGCACCGGCACCCGAACAAAACCGGGGAGTGCCTCGACGGAGCAAATTACTGGG
 
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rJMFF028B16+          CAAACAAGTACAACCAAGGACTTCAGTCAATGCTTCAGAGCTTGAAATCCAGTCTCAATG
rJMFF038I24+          CAAACAAGTACAACCAAGGACTTCAGTCAATGCTTCAGAGCTTGAAATCCAGTCTCAATG
rJMFF003P07+          CAAACAAGTACAACCAAGGACTTCAGTCAATGCTTCAGAGCTTGAAATCCAGTCTCAATG
rJMFF050K10+          CAAACAAGTACAACCAAGGACTTCAGTCAATGCTTCAGAGCTTGAAATCCAGTCTCAATG
                      ____________________________________________________________
consensus             CAAACAAGTACAACCAAGGACTTCAGTCAATGCTTCAGAGCTTGAAATCCAGTCTCAATG
 
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rJMFF028B16+          ACTTCAACTACTCATATTTCGACACCTACAATTTCCTTCTAACCGTCATTCAAAACCCAT
rJMFF038I24+          ACTTCAACTACTCATATTTCGACACCTACAATTTCCTTCTAACCGTCATTCAAAACCCAT
rJMFF003P07+          ACTTCAACTACTCATATTTCGACACCTACAATTTCCTTCTAACCGTCATTCAAAACCCAT
rJMFF050K10+          ACTTCAACTACTCATATTTCGACACCTACAATTTCCTTCTAACCGTCATTCAAAACCCAT
                      ____________________________________________________________
consensus             ACTTCAACTACTCATATTTCGACACCTACAATTTCCTTCTAACCGTCATTCAAAACCCAT
 
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rJMFF028B16+          CAACTTACGGGTTTAAGGAAGTGAAAGCTGCTTGCTGTGGATTGGGGAGGTTGAATGCTG
rJMFF038I24+          CAACTTACGGGTTTAAGGAAGTGAAAGCTGCTTGCTGTGGATTGGGGAGGTTGAATGCTG
rJMFF003P07+          CAACTTACGGGTTTAAGGAAGTGAAAGCTGCTTGCTGTGGATTGGGGAGGTTGAATGCTG
rJMFF050K10+          CAACTTACGGGTTTAAGGAAGTGAAAGCTGCTTGCTGTGGATTGGGGAGGTTGAATGCTG
                      ____________________________________________________________
consensus             CAACTTACGGGTTTAAGGAAGTGAAAGCTGCTTGCTGTGGATTGGGGAGGTTGAATGCTG
 
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rJMFF028B16+          AGCTTCCATGCACTCCGATATCCATATATTGCTCCAAGAGAAGTGATTATATTTTCTGGG
rJMFF038I24+          AGCTTCCATGCACTCCGATATCCATATATTGCTCCAAGAGAAGTGATTATATTTTCTGGG
rJMFF003P07+          AGCTTCCATGCACTCCGATATCCATATATTGCTCCAAGAGAAGTGATTATATTTTCTGGG
rJMFF050K10+          AGCTTCCATGCACTCCGATATCCATATATTGCTCCAAGAGAAGTGATTATATTTTCTGGG
                      ____________________________________________________________
consensus             AGCTTCCATGCACTCCGATATCCATATATTGCTCCAAGAGAAGTGATTATATTTTCTGGG
 
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rJMFF028B16+          ACAGATATCACCCCACGGAGACCGCAGCTAGTGTTCTTGCCAGTGCAGTTTTTAGTGGCT
rJMFF038I24+          ACAGATATCACCCCACGGAGACCGCAGCTAGTGTTCTTGCCAGTGCAGTTTTTAGTGGCT
rJMFF003P07+          ACAGATATCACCCCACGGAGACCGCAGCTAGTGTTCTTGCCAGTGCAGTTTTTAGTGGCT
rJMFF050K10+          ACAGATATCACCCCACGGAGACCGCAGCTAGTGTTCTTGCCAGTGCAGTTTTTAGTGGCT
                      ____________________________________________________________
consensus             ACAGATATCACCCCACGGAGACCGCAGCTAGTGTTCTTGCCAGTGCAGTTTTTAGTGGCT
 
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rJMFF028B16+          CTAAGCAATATGCAAACCCTGTCAATCTCAATCAACTCATTTCTCTGTAATCTTCACCTC
rJMFF038I24+          CTAAGCAATATGCAAACCCTGTCAATCTCAATCAACTCATTTCTCTGTAATCTTCACCTC
rJMFF003P07+          CTAAGCAATATGCAAACCCTGTCAATCTCAATCAACTCATTTCTCTGTAATCTTCACCTC
rJMFF050K10+          CTAAGCAATATGCAAACCCTGTCAATCTCAATCAACTCATTTCTCTGTAATCTTCACCTC
                      ____________________________________________________________
consensus             CTAAGCAATATGCAAACCCTGTCAATCTCAATCAACTCATTTCTCTGTAATCTTCACCTC
 
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rJMFF028B16+          ATCACTCACATGATATAATCAAAAGTGTAAGCAAATAGCCATATATATACAACAATTTTT
rJMFF038I24+          ATCACTCACATGATATAATCAAAAGTGTAAGCAAATAGCCATATATATACAACAATTTTT
rJMFF003P07+          ATCACTCACATGATATAATCAAAAGTGTAAGCAAATAGCCATATATATACAACAATTTTT
rJMFF050K10+          ATCACTCACATGATATAATCAAAAGTGTAAGCAAATAGCCATATATATACAACAATTTTT
                      ____________________________________________________________
consensus             ATCACTCACATGATATAATCAAAAGTGTAAGCAAATAGCCATATATATACAACAATTTTT
 
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rJMFF028B16+          GTAAACTGGTATTCGCATCCTGTTAAATAAG                             
rJMFF038I24+          GTAAACTGGTATTCGCATCCTGTTAAATAAG                             
rJMFF003P07+          GTAAACTGGTATTCGCATCCTGTTAAATAAGACTAATCTGACC                 
rJMFF050K10+          GTAAACTGGTATTCGCATCCTGTTAAATAAGACTAATCTGACCGAGTTTTGATCGACTAT
                      ____________________________________________________________
consensus             GTAAACTGGTATTCGCATCCTGTTAAATAAGACTAATCTGACCGAGTTTTGATCGACTAT