Contig 005555:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF001J11+                                                                 AAAGA
                      ____________________________________________________________
consensus                                                                    AAAGA
 
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rJMSF001J11+          GGTTAGCTCTGCTCAACCACTTGTATGGTATAAGACTTTTTTTGATGAGCCTGAGGGCAA
                      ____________________________________________________________
consensus             GGTTAGCTCTGCTCAACCACTTGTATGGTATAAGACTTTTTTTGATGAGCCTGAGGGCAA
 
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rJMSF001J11+          TGATCCTCTTGCTTTAAACCTTGGCTCTATGGGCAAAGGAGAAGTTTGGGTTAACGGCCA
                      ____________________________________________________________
consensus             TGATCCTCTTGCTTTAAACCTTGGCTCTATGGGCAAAGGAGAAGTTTGGGTTAACGGCCA
 
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rJMSF001J11+          AAGTATTGGCCGATACTGGGTCTCATTTCGTACACTTGCAGGAACACCTTCTCAAACATG
                      ____________________________________________________________
consensus             AAGTATTGGCCGATACTGGGTCTCATTTCGTACACTTGCAGGAACACCTTCTCAAACATG
 
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rJMSF001J11+          GTACAATGTTCCTAGATCATTTCTCAAACCAACAGGAAATCTGTTAATTTTATTTGAGGA
rJMFF049E18+                                                   TGTTAATTTTATTTGAGGA
                      ____________________________________________________________
consensus             GTACAATGTTCCTAGATCATTTCTCAAACCAACAGGAAATCTGTTAATTTTATTTGAGGA
 
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rJMSF001J11+          GGAACATGGAAACCCTTGCGGCATCACACTTGATACAGTCTCAATCACAAGTGTCTGTGG
rJMFF049E18+          GGAACATGGAAACCCTTGCGGCATCACACTTGATACAGTCTCAATCACAAGTGTCTGTGG
                      ____________________________________________________________
consensus             GGAACATGGAAACCCTTGCGGCATCACACTTGATACAGTCTCAATCACAAGTGTCTGTGG
 
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rJMSF001J11+          ACATGTGACAGATTCTAACCCACCATTTCAAATTCCATGGAAGAGGTATGCAAGGAGGCC
rJMFF049E18+          ACATGTGACAGATTCTAACCCACCATTTCAAATTCCATGGAAGAGGTATGCAAGGAGGCC
                      ____________________________________________________________
consensus             ACATGTGACAGATTCTAACCCACCATTTCAAATTCCATGGAAGAGGTATGCAAGGAGGCC
 
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rJMSF001J11+          TAAGGTACAGCTCAATTGTCCACCAAACCGCAATATTTCTAAAATTTTATTTGCGAGCTT
rJMFF049E18+          TAAGGTACAGCTCAATTGTCCACCAAACCGCAATATTTCTAAAATTTTATTTGCGAGCTT
                      ____________________________________________________________
consensus             TAAGGTACAGCTCAATTGTCCACCAAACCGCAATATTTCTAAAATTTTATTTGCGAGCTT
 
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rJMSF001J11+          TGGGAGACCTTCTGGTGACTGCAGTGCTTATGCTGTTGGGAGTTGTCATTCATCCAGTTC
rJMFF049E18+          TGGGAGACCTTCTGGTGACTGCAGTGCTTATGCTGTTGGGAGTTGTCATTCATCCAGTTC
                      ____________________________________________________________
consensus             TGGGAGACCTTCTGGTGACTGCAGTGCTTATGCTGTTGGGAGTTGTCATTCATCCAGTTC
 
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rJMSF001J11+          TAGAGCCATTGTTGAGAAGGCTTGCATAGGGAAAAGGAAATGCACCATCTCACAATCATA
rJMFF049E18+          TAGAGCCATTGTTGAGAAGGCTTGCATAGGGAAAAGGAAATGCACCATCTCACAATCATA
                      ____________________________________________________________
consensus             TAGAGCCATTGTTGAGAAGGCTTGCATAGGGAAAAGGAAATGCACCATCTCACAATCATA
 
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rJMSF001J11+          CAAAAGATTTGGTGGTGACCCATGTCCAGGAATTCCTAAATCTCTACTGGTTGATGTGCA
rJMFF049E18+          CAAAAGATTTGGTGGTGACCCATGTCCAGGAATTCCTAAATCTCTACTGGTTGATGTGCA
                      ____________________________________________________________
consensus             CAAAAGATTTGGTGGTGACCCATGTCCAGGAATTCCTAAATCTCTACTGGTTGATGTGCA
 
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rJMSF001J11+          ATGTGGGTGAGAGGGTATCAAGTTCTAACAATCTTTGCTCAAAATGATAGGCATCATTCA
rJMFF049E18+          ATGTGGGTGAGAGGGTATCAAGTTCTAACAATCTTTGCTCAAAATGATAGGCATCATTCA
                      ____________________________________________________________
consensus             ATGTGGGTGAGAGGGTATCAAGTTCTAACAATCTTTGCTCAAAATGATAGGCATCATTCA
 
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rJMSF001J11+          ACACATTCATTCTAAGTTCAAAAGAAGATACAGCATAATAGATACTAGATAGTTTAATCC
rJMFF049E18+          ACACATTCATTCTAAGTTCAAAAGAAGATACAGCATAATAGATACTAGATAGTTTAATCC
                      ____________________________________________________________
consensus             ACACATTCATTCTAAGTTCAAAAGAAGATACAGCATAATAGATACTAGATAGTTTAATCC
 
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rJMSF001J11+          TCTGATAGCAAATACATATCCAATTCAAATCTGAAATTTTTCAACCCATTCC        
rJMFF049E18+          TCTGATAGCAAATACATATCCAATTCAAATCTGAAATTTTTCAACCCATTCCAGCTGTAC
                      ____________________________________________________________
consensus             TCTGATAGCAAATACATATCCAATTCAAATCTGAAATTTTTCAACCCATTCCAGCTGTAC
 
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rJMFF049E18+          CTAATGATTAACTTTTCAAGTGGGAATAACTTTTACAAAGAACAGATGACTTCCAGTGAT
                      ____________________________________________________________
consensus             CTAATGATTAACTTTTCAAGTGGGAATAACTTTTACAAAGAACAGATGACTTCCAGTGAT