Contig 005554:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF013B05Sequence340006478 (4)ref|XP_007140432.1|3e-10hypothetical protein PHAVU_008G111400g [Phaseolus vulgaris] gb|ESW12426.1| hypot681005554 (3)ref|XP_009778445.1|1e-123PREDICTED: protein SSUH2 homolog isoform X3 [Nicotiana sylvestris]
JMFF049D18Sequence611006478 (4)ref|XP_009586657.1|5e-66PREDICTED: protein SSUH2 homolog isoform X2 [Nicotiana tomentosiformis]572005554 (3)ref|XP_009778445.1|2e-83PREDICTED: protein SSUH2 homolog isoform X3 [Nicotiana sylvestris]
JMSF018F03Sequence256006478 (4)ref|XP_007140432.1|7e-11hypothetical protein PHAVU_008G111400g [Phaseolus vulgaris] gb|ESW12426.1| hypot745005554 (3)ref|XP_009778445.1|3e-121PREDICTED: protein SSUH2 homolog isoform X3 [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF018F03+ AAGAGTTCCTCATTCTGAAAAGATTGACAAATG
                      ____________________________________________________________
consensus AAGAGTTCCTCATTCTGAAAAGATTGACAAATG
 
. : . : . : . : . : . :
rJMFF013B05+ CCCAATTGTAATGCAGATCATGACC
rJMSF018F03+ CCCAGGTTGTCGTGGACTAGGAAGTGTAGTCTGTCCCCAATTGTAATGCAGATCATGACC
                      ____________________________________________________________
consensus CCCAGGTTGTCGTGGACTAGGAAGTGTAGTCTGTCCCCAATTGTAATGCAGATCATGACC
 
. : . : . : . : . : . :
rJMFF013B05+ CTGGATTCTACAATGTGGGCCAAATGTCTAAGTGTCCTACTTGCTATGGGAGAGGACTAC
rJMSF018F03+ CTGGATTCTACAATGTGGGCCAAATGTCTAAGTGTCCTACTTGCTATGGGAGAGGACTAC
                      ____________________________________________________________
consensus CTGGATTCTACAATGTGGGCCAAATGTCTAAGTGTCCTACTTGCTATGGGAGAGGACTAC
 
. : . : . : . : . : . :
rJMFF013B05+ TTGCATACAAAGATGGATCTGACATAATATGTCGAAATTGTAAAGGTCATGGGAAACTTC
rJMSF018F03+ TTGCATACAAAGATGGATCTGACATAATATGTCGAAATTGTAAAGGTCATGGGAAACTTC
                      ____________________________________________________________
consensus TTGCATACAAAGATGGATCTGACATAATATGTCGAAATTGTAAAGGTCATGGGAAACTTC
 
. : . : . : . : . : . :
rJMFF013B05+ CTTGTGCCAATTGCGAGTCCCGTGGTCTAATCAAATGTCAGACTTGTAAGGGAGGTGGCT
rJMSF018F03+ CTTGTGCCAATTGCGAGTCCCGTGGTCTAATCAAATGTCAGACTTGCAAGGGAGGTGGCT
rJMFF049D18+ AATCAAATGTCAGACTTGCAAGGGAGGTGGCT
                      ____________________________________________________________
consensus CTTGTGCCAATTGCGAGTCCCGTGGTCTAATCAAATGTCAGACTTGCAAGGGAGGTGGCT
 
. : . : . : . : . : . :
rJMFF013B05+ CATTTTTGTCATACAAAGTAGCTATTGTCAGATGGAAGACACTCTCAACGCGAAAAGTGA
rJMSF018F03+ CATTTTTGTCATACAAAGTAGCTATTGTCAGATGGAAGACACTCTCAACGCGAAAAGTGA
rJMFF049D18+ CATTTTTGTCATACAAAGTAGCTATTGTCAGATGGAAGACACTCTCAACGCGAAAAGTGA
                      ____________________________________________________________
consensus CATTTTTGTCATACAAAGTAGCTATTGTCAGATGGAAGACACTCTCAACGCGAAAAGTGA
 
. : . : . : . : . : . :
rJMFF013B05+ ATGCTACAATTGGAGCAGCCTCGGTTCCAGACGACGTCTTCCACAAAGCTAAAGGAGTCC
rJMSF018F03+ ATGCTACAAGTGGAGCAGCCTCGGTTCCAGACGACGTCTTCCACAAAGCTAAAGGAGTCC
rJMFF049D18+ ATGCTACAAGTGGAGCAGCCTCGGTTCCAGACGACGTCTTCCACAAAGCTAAAGGAGTCC
                      ____________________________________________________________
consensus ATGCTACAAGTGGAGCAGCCTCGGTTCCAGACGACGTCTTCCACAAAGCTAAAGGAGTCC
 
. : . : . : . : . : . :
rJMFF013B05+ AGCTATGCAATAACCAAGCGCACCAGTGCACGCCTGCCTATTTCGCGGATTCATATTTCC
rJMSF018F03+ AGCTATGCAATAACCAAGCGCACCAGTGCACGCCTGCCTATTTCGCGGATTCATATTTCC
rJMFF049D18+ AGCTATGCAATAACCAAGCGCACCAGTGCACGCCTGCCTATTTCGCGGATTCATATTTCC
                      ____________________________________________________________
consensus AGCTATGCAATAACCAAGCGCACCAGTGCACGCCTGCCTATTTCGCGGATTCATATTTCC
 
. : . : . : . : . : . :
rJMFF013B05+ TCAACAAGTTTTCTTCTGAGGTCATTGCAGAGAGGGCTGATGTGCCACAAACCGCGAGGG
rJMSF018F03+ TCAACAAGTTTTCTTCTGAGGTCATTGCAGAGAGGGCTGATGTGCCACAAACCGCGAGGG
rJMFF049D18+ TCAACAAGTTTTCTTCTGAGGTCATTGCAGAGAGGGCTGATGTGCCACAAACCGCGAGGG
                      ____________________________________________________________
consensus TCAACAAGTTTTCTTCTGAGGTCATTGCAGAGAGGGCTGATGTGCCACAAACCGCGAGGG
 
. : . : . : . : . : . :
rJMFF013B05+ TCATATGCGAAAGGCATACCATCTCGGTGGTTCCAGTGACCCGTGTGACCATGACTCACC
rJMSF018F03+ TCATATGCGAAAGGCATACCATCTCGGTGGTTCCAGTGACCCGTGTGACCATGACTCACC
rJMFF049D18+ TCATATGCGAAAGGCATACCATCTCGGTGGTTCCAGTGACCCGTGTGACCATGACTCACC
                      ____________________________________________________________
consensus TCATATGCGAAAGGCATACCATCTCGGTGGTTCCAGTGACCCGTGTGACCATGACTCACC
 
. : . : . : . : . : . :
rJMFF013B05+ ACAAACGCTCATTCAGTTTCTACATCATTGGAGTCAGCATGGAGGTGTACCTGTGCGACG
rJMSF018F03+ ACAAACGCTCATTCAGTTTCTACATCATTGGAGTCAGCATGGAGGTGTACCTGTGCGACG
rJMFF049D18+ ACAAACGCTCATTCAGTTTCTACATCATTGGAGTCAGCATGGAGGTGTACCTGTGCGACG
                      ____________________________________________________________
consensus ACAAACGCTCATTCAGTTTCTACATCATTGGAGTCAGCATGGAGGTGTACCTGTGCGACG
 
. : . : . : . : . : . :
rJMFF013B05+ ACTACCCTTCGAGATTTTGCTGGGGTCTGTGCCCATGCTTGGAATGGTTGAATGCTTAAA
rJMSF018F03+ ACTACCCTTCGAGATTTTGCTGGGGTCTGTGCCCATGCTTGGAATGGTTGAATGCTTAAA
rJMFF049D18+ ACTACCCTTCGAGATTTTGCTGGGGTCTGTGCCCATGCTTGGGATGGTTGAATGCTTAAA
                      ____________________________________________________________
consensus ACTACCCTTCGAGATTTTGCTGGGGTCTGTGCCCATGCTTGGAATGGTTGAATGCTTAAA
 
. : . : . : . : . : . :
rJMFF013B05+ ACTGTAAATTTTCTTGTGAGCAGAA
rJMSF018F03+ ACTGTAAATTTTCTTGTGAGCAGAA
rJMFF049D18+ ACTGTAAATTTTCTTGTGAGCAGAACAGTTGAGTACTTGTGTGAATTCTTTAGTAATGCT
                      ____________________________________________________________
consensus ACTGTAAATTTTCTTGTGAGCAGAACAGTTGAGTACTTGTGTGAATTCTTTAGTAATGCT
 
. : . : . : . : . : . :
rJMFF049D18+ TCATTGTGATTCTTAAAATTGTTTGCAGTATTGAGAGAAAAAAAAAAAACTCTCCAGGGT
                      ____________________________________________________________
consensus TCATTGTGATTCTTAAAATTGTTTGCAGTATTGAGAGAAAAAAAAAAAACTCTCCAGGGT