Contig 005549:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001F14Sequence117002367 (6)764005549 (6)ref|XP_006349290.1|375PREDICTED: uncharacterized protein LOC102579219 [Solanum tuberosum]
JMFF035C14Sequence221002367 (6)426005549 (6)ref|XP_006349290.1|172PREDICTED: uncharacterized protein LOC102579219 [Solanum tuberosum]
JMFF036P15Sequence122002367 (6)660005549 (6)ref|XP_006349290.1|298PREDICTED: uncharacterized protein LOC102579219 [Solanum tuberosum]
JMFF048I18Sequence412002367 (6)269005549 (6)ref|XP_006349290.1|67.0PREDICTED: uncharacterized protein LOC102579219 [Solanum tuberosum]
JMSF037F19Sequence238002367 (6)703005549 (6)ref|XP_006349290.1|320PREDICTED: uncharacterized protein LOC102579219 [Solanum tuberosum]
JMSF037O18Sequence240002367 (6)699005549 (6)ref|XP_006349290.1|318PREDICTED: uncharacterized protein LOC102579219 [Solanum tuberosum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF001F14+ TACAAACGCCAGATTAAAAGTCAG
                      ____________________________________________________________
consensus TACAAACGCCAGATTAAAAGTCAG
 
. : . : . : . : . : . :
rJMFF001F14+ AATGTTGAATGGGGATCAGTATCGCTGGTGGATGCTGAGAGGCGGCTTTTGGCCAACGCC
                      ____________________________________________________________
consensus AATGTTGAATGGGGATCAGTATCGCTGGTGGATGCTGAGAGGCGGCTTTTGGCCAACGCC
 
. : . : . : . : . : . :
rJMFF001F14+ CTACTAGACTTCTCAAACGAACGATTTGTTCTTCTGTCTGAGAGCTGTATCCCGGTTTAC
rJMSF037F19+ CTCAAACGAACGATTTGTTCTTCTGTCTGAGAGCTGTATCCCGGTTTAC
rJMFF036P15+ CTGAGAGCTGTATCCCGGTTTAC
rJMSF037O18+ CTCAAACGAACGATTTGTTCTTCTGTCTGAGAGCTGTATCCCGGTTTAC
                      ____________________________________________________________
consensus CTACTAGACTTCTCAAACGAACGATTTGTTCTTCTGTCTGAGAGCTGTATCCCGGTTTAC
 
. : . : . : . : . : . :
rJMFF001F14+ GATTTCCCTACAGTCTACAAATATCTCACTGAATCAACCCACAGCTTCATCGAATCATAT
rJMSF037F19+ GATTTCCCTACAGTCTACAAATATCTCACTGAATCAACCCACAGCTTCATCGAATCATAT
rJMFF036P15+ GATTTCCNTACAGTCTACAAATATCTCACTGAATCAACCCACAGCTTCATCGAATCATAT
rJMSF037O18+ GATTTCCCTACAGTCTACAAATATCTCACTGAATCAACCCACAGCTTCATCGAATCATAT
                      ____________________________________________________________
consensus GATTTCCCTACAGTCTACAAATATCTCACTGAATCAACCCACAGCTTCATCGAATCATAT
 
. : . : . : . : . : . :
rJMFF001F14+ GATGACCCTACTCGTTATGGGCGTGGTCGCTACAACACTCGCATGAAGCCCGATATCAAA
rJMSF037F19+ GATGACCCTACTCGTTATGGGCGTGGTCGCTACAACACTCGCATGAAGCCCGATATCAAA
rJMFF036P15+ GATGACCCTACTCGTTATGGGCGTGGTCGCTACAACACTCGCATGAAGCCCGATATCAAA
rJMSF037O18+ GATGACCCTACTCGTTATGGGCGTGGTCGCTACAACACTCGCATGAAGCCCGATATCAAA
                      ____________________________________________________________
consensus GATGACCCTACTCGTTATGGGCGTGGTCGCTACAACACTCGCATGAAGCCCGATATCAAA
 
. : . : . : . : . : . :
rJMFF001F14+ CTTCATGAATGGCGAAAAGGATCTCAGTGGTTTGAGATGAACCGTGCTTTGGCCATCATA
rJMSF037F19+ CTTCATGAATGGCGAAAAGGATCTCAGTGGTTTGAGATGAACCGTGCTTTGGCCATCATA
rJMFF036P15+ CTTCATGAATGGCGAAAAGGATCTCAGTGGTTTGAGATGAACCGTGCTTTGGCCATCATA
rJMSF037O18+ CTTCATGAATGGCGAAAAGGATCTCAGTGGTTTGAGATGAACCGTGCTTTGGCCATCATA
                      ____________________________________________________________
consensus CTTCATGAATGGCGAAAAGGATCTCAGTGGTTTGAGATGAACCGTGCTTTGGCCATCATA
 
. : . : . : . : . : . :
rJMFF001F14+ ATTGTCTCAGAAACCAAATTCTACGCTATGTTCAAGAAGTATTGCAGGCCATCCTGTTAT
rJMSF037F19+ ATTGTCTCAGAAACCAAATTCTACGCTATGTTCAAGAAGTATTGCAGGCCATCCTGTTAT
rJMFF036P15+ ATTGTCTCAGAAACCAAATTCTACGCTATGTTCAAGAAGTATTGCAGGCCATCCTGTTAT
rJMFF035C14+ ACGCTATGTTCAAGAAGTATTGCAGGCCATCCTGTTAT
rJMSF037O18+ ATTGTCTCAGAAACCAAATTCTACGCTATGTTCAAGAAGTATTGCAGGCCATCCTGTTAT
                      ____________________________________________________________
consensus ATTGTCTCAGAAACCAAATTCTACGCTATGTTCAAGAAGTATTGCAGGCCATCCTGTTAT
 
. : . : . : . : . : . :
rJMFF001F14+ CCCGATGAGCACTACATTCCCACCTATCTACAACTGCACCACGGGTATATGAATGCTAAC
rJMSF037F19+ CCCGATGAGCACTACATTCCCACCTATCTACAACTGCACCACGGGTATATGAATGCTAAC
rJMFF036P15+ CCCGATGAGCACTACATTCCCACCTATCTACAACTGCACCACGGGTATATGAATGCTAAC
rJMFF035C14+ CCCGATGAGCACTACATTCCCACCTATGTACAACTGCACCACGGGTATATGAATGCTAAC
rJMSF037O18+ CCCGATGAGCACTACATTCCCACCTATCTACAACTGCACCACGGGTATATGAATGCTAAC
                      ____________________________________________________________
consensus CCCGATGAGCACTACATTCCCACCTATCTACAACTGCACCACGGGTATATGAATGCTAAC
 
. : . : . : . : . : . :
rJMFF001F14+ CGAAGTGTGACTTACGTTGACTGGTCATTAGGGGGCCCTCACCCGGCATCTTACACTGCA
rJMSF037F19+ CGAAGTGTGACTTACGTTGACTGGTCATTAGGGGGCCCTCACCCGGCATCTTACACTGCA
rJMFF036P15+ CGAAGTGTGACTTACGTTGACTGGTCATTAGGGGGCCCTCACCCGGCATCTTACACTGCA
rJMFF035C14+ CGAAGTGTGACTTACGTTGACTGGTCATTAGGGGGCCCTCACCCGGCATCTTACACTGCA
rJMSF037O18+ CGAAGTGTGACTTACGTTGACTGGTCATTAGGGGGCCCTCACCCGGCATCTTACACTGCA
                      ____________________________________________________________
consensus CGAAGTGTGACTTACGTTGACTGGTCATTAGGGGGCCCTCACCCGGCATCTTACACTGCA
 
. : . : . : . : . : . :
rJMFF001F14+ GCTAACATTACCGAAGGCTTCATACAGTCAATAAGGAGTAATGGCACGTCGTGTTCTTAC
rJMSF037F19+ GCTAACATTACCGAAGGCTTCATACAGTCAATAAGGAGTAATGGCACGTCGTGTTCTTAC
rJMFF036P15+ GCTAACATTACCGAAGGCTTCATACAGTCAATAAGGAGTAATGGCACGTCGTGTTCTTAC
rJMFF035C14+ GCTAACATTACCGAAGGCTTCATACAGTCAATAAGGAGTAATGGCACGTCGTGTTCTTAC
rJMSF037O18+ GCTAACATTACCGAAGGCTTCATACAGTCAATAAGGAGTAATGGCACGTCGTGTTCTTAC
rJMFF048I18+ AATAAGGAGTAATGGCACGTCGTGTTCTTAC
                      ____________________________________________________________
consensus GCTAACATTACCGAAGGCTTCATACAGTCAATAAGGAGTAATGGCACGTCGTGTTCTTAC
 
. : . : . : . : . : . :
rJMFF001F14+ AATCGTGGGAAGACACAAATCTGTTATCTGTTTGCCAGAAAGTTTTTTCCAAGCGCTTTA
rJMSF037F19+ AATCGTGGGAAGACACAAATCTGTTATCTGTTTGCCAGAAAGTTTTTTCCAAGCGCTTTA
rJMFF036P15+ AATCGTGGGAAGACACAAATCTGTTATCTGTTTGCCAGAAAGTTTTTTCCAAGCGCTTTA
rJMFF035C14+ AATCGTGGGAAGACACAAATCTGTTATCTGTTTGCCAGAAAGTTTTTTCCAAGCGCTTTA
rJMSF037O18+ AATCGTGGGAAGACACAAATCTGTTATCTGTTTGCCAGAAAGTTTTTTCCAAGCGCTTTA
rJMFF048I18+ AATCGTGGGAAGACACAAATCTGTTATCTGTTTGCCAGAAAGTTTTTTCCAAGCGCTTTA
                      ____________________________________________________________
consensus AATCGTGGGAAGACACAAATCTGTTATCTGTTTGCCAGAAAGTTTTTTCCAAGCGCTTTA
 
. : . : . : . : . : . :
rJMFF001F14+ GAACCATTAGAGAAACTGTCCTTGAAGGTGATGGGGTTTTAAATTTTGTCACATAGATAA
rJMSF037F19+ GAACCATTAGAGAAACTGTCCTTGAAGGTGATGGGGTTTTAAATTTTGTCACATAGATAA
rJMFF036P15+ GAACCATTAGAGAAACTGTCCTTGAAGGTGATGGGGTTTTAAATTTTGTCACATAGATAA
rJMFF035C14+ GAACCATTAGAGAAACTGTCCTTGAAGGTGATGGGGTTTTAAATTTTGTCACATAGATAA
rJMSF037O18+ GAACCATTAGAGAAACTGTCCTTGAAGGTGATGGGGTTTTAAATTTTGTCACATAGATAA
rJMFF048I18+ GAACCATTAGAGAAACTGTCCTTGAAGGTGATGGGGTTTTAAATTTTGTCACATAGATAA
                      ____________________________________________________________
consensus GAACCATTAGAGAAACTGTCCTTGAAGGTGATGGGGTTTTAAATTTTGTCACATAGATAA
 
. : . : . : . : . : . :
rJMFF001F14+ AAAGGGTTGGTTTTATCAGTCTTTTCTGATTGTATTTAATGGAGCTTTTGACATAGCTA-
rJMSF037F19+ AAAGGGTTGGTTTTATCAGTCTTTTCTGATTGTATTTAATGGAGCTTTTGACATAGCTAC
rJMFF036P15+ AAAGGGTTGGTTTTATCAGTCTTTTCTGATTGTATTTAATGGAGCTTTTGACATAGCTA-
rJMFF035C14+ AAAGGGTTGGTTTTATCAGTCTTTTCTGATTGTATTTAATGGAGCTTTTGACATAGCTA-
rJMSF037O18+ AAAGGGTTGGTTTTATCAGTCTTTTCTGATTGTATTTAATGGAGCTTTTGACATAGCTA-
rJMFF048I18+ AAAGGGTTGGTTTTATCAGTCTTTTCTGATTGTATTTAATGGAGCTTTTGACATAGCTA-
                      ____________________________________________________________
consensus AAAGGGTTGGTTTTATCAGTCTTTTCTGATTGTATTTAATGGAGCTTTTGACATAGCTA-
 
. : . : . : . : . : . :
rJMFF001F14+ CAGTTTTGGT-CATGTAGTTTT
rJMSF037F19+ CAGTTTTGGTCCATGTAGTTTTTGTGTTTGTTTATAGAGTACTGAAGATT
rJMFF036P15+ C
rJMFF035C14+ CAGTTTTGGT-C
rJMSF037O18+ CAGTTTTGGT-CATGTAGTTTTTGTGTTTGTTTATAGAGTACTGAAGATT
rJMFF048I18+ CAGTTTTGGT-CATGTAGTTTTTGTGTTTGTTTATAGAGTACTGAAGATTTGTTGAGAGG
                      ____________________________________________________________
consensus CAGTTTTGGT-CATGTAGTTTTTGTGTTTGTTTATAGAGTACTGAAGATTTGTTGAGAGG