| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF001F14 | Sequence | 117 | 002367 (6) | 764 | 005549 (6) | ref|XP_006349290.1| | 375 | PREDICTED: uncharacterized protein LOC102579219 [Solanum tuberosum] | |||
| JMFF035C14 | Sequence | 221 | 002367 (6) | 426 | 005549 (6) | ref|XP_006349290.1| | 172 | PREDICTED: uncharacterized protein LOC102579219 [Solanum tuberosum] | |||
| JMFF036P15 | Sequence | 122 | 002367 (6) | 660 | 005549 (6) | ref|XP_006349290.1| | 298 | PREDICTED: uncharacterized protein LOC102579219 [Solanum tuberosum] | |||
| JMFF048I18 | Sequence | 412 | 002367 (6) | 269 | 005549 (6) | ref|XP_006349290.1| | 67.0 | PREDICTED: uncharacterized protein LOC102579219 [Solanum tuberosum] | |||
| JMSF037F19 | Sequence | 238 | 002367 (6) | 703 | 005549 (6) | ref|XP_006349290.1| | 320 | PREDICTED: uncharacterized protein LOC102579219 [Solanum tuberosum] | |||
| JMSF037O18 | Sequence | 240 | 002367 (6) | 699 | 005549 (6) | ref|XP_006349290.1| | 318 | PREDICTED: uncharacterized protein LOC102579219 [Solanum tuberosum] | |||
This contig is upended
. : . : . : . : . : . :
rJMFF001F14+ TACAAACGCCAGATTAAAAGTCAG
____________________________________________________________
consensus TACAAACGCCAGATTAAAAGTCAG
. : . : . : . : . : . :
rJMFF001F14+ AATGTTGAATGGGGATCAGTATCGCTGGTGGATGCTGAGAGGCGGCTTTTGGCCAACGCC
____________________________________________________________
consensus AATGTTGAATGGGGATCAGTATCGCTGGTGGATGCTGAGAGGCGGCTTTTGGCCAACGCC
. : . : . : . : . : . :
rJMFF001F14+ CTACTAGACTTCTCAAACGAACGATTTGTTCTTCTGTCTGAGAGCTGTATCCCGGTTTAC
rJMSF037F19+ CTCAAACGAACGATTTGTTCTTCTGTCTGAGAGCTGTATCCCGGTTTAC
rJMFF036P15+ CTGAGAGCTGTATCCCGGTTTAC
rJMSF037O18+ CTCAAACGAACGATTTGTTCTTCTGTCTGAGAGCTGTATCCCGGTTTAC
____________________________________________________________
consensus CTACTAGACTTCTCAAACGAACGATTTGTTCTTCTGTCTGAGAGCTGTATCCCGGTTTAC
. : . : . : . : . : . :
rJMFF001F14+ GATTTCCCTACAGTCTACAAATATCTCACTGAATCAACCCACAGCTTCATCGAATCATAT
rJMSF037F19+ GATTTCCCTACAGTCTACAAATATCTCACTGAATCAACCCACAGCTTCATCGAATCATAT
rJMFF036P15+ GATTTCCNTACAGTCTACAAATATCTCACTGAATCAACCCACAGCTTCATCGAATCATAT
rJMSF037O18+ GATTTCCCTACAGTCTACAAATATCTCACTGAATCAACCCACAGCTTCATCGAATCATAT
____________________________________________________________
consensus GATTTCCCTACAGTCTACAAATATCTCACTGAATCAACCCACAGCTTCATCGAATCATAT
. : . : . : . : . : . :
rJMFF001F14+ GATGACCCTACTCGTTATGGGCGTGGTCGCTACAACACTCGCATGAAGCCCGATATCAAA
rJMSF037F19+ GATGACCCTACTCGTTATGGGCGTGGTCGCTACAACACTCGCATGAAGCCCGATATCAAA
rJMFF036P15+ GATGACCCTACTCGTTATGGGCGTGGTCGCTACAACACTCGCATGAAGCCCGATATCAAA
rJMSF037O18+ GATGACCCTACTCGTTATGGGCGTGGTCGCTACAACACTCGCATGAAGCCCGATATCAAA
____________________________________________________________
consensus GATGACCCTACTCGTTATGGGCGTGGTCGCTACAACACTCGCATGAAGCCCGATATCAAA
. : . : . : . : . : . :
rJMFF001F14+ CTTCATGAATGGCGAAAAGGATCTCAGTGGTTTGAGATGAACCGTGCTTTGGCCATCATA
rJMSF037F19+ CTTCATGAATGGCGAAAAGGATCTCAGTGGTTTGAGATGAACCGTGCTTTGGCCATCATA
rJMFF036P15+ CTTCATGAATGGCGAAAAGGATCTCAGTGGTTTGAGATGAACCGTGCTTTGGCCATCATA
rJMSF037O18+ CTTCATGAATGGCGAAAAGGATCTCAGTGGTTTGAGATGAACCGTGCTTTGGCCATCATA
____________________________________________________________
consensus CTTCATGAATGGCGAAAAGGATCTCAGTGGTTTGAGATGAACCGTGCTTTGGCCATCATA
. : . : . : . : . : . :
rJMFF001F14+ ATTGTCTCAGAAACCAAATTCTACGCTATGTTCAAGAAGTATTGCAGGCCATCCTGTTAT
rJMSF037F19+ ATTGTCTCAGAAACCAAATTCTACGCTATGTTCAAGAAGTATTGCAGGCCATCCTGTTAT
rJMFF036P15+ ATTGTCTCAGAAACCAAATTCTACGCTATGTTCAAGAAGTATTGCAGGCCATCCTGTTAT
rJMFF035C14+ ACGCTATGTTCAAGAAGTATTGCAGGCCATCCTGTTAT
rJMSF037O18+ ATTGTCTCAGAAACCAAATTCTACGCTATGTTCAAGAAGTATTGCAGGCCATCCTGTTAT
____________________________________________________________
consensus ATTGTCTCAGAAACCAAATTCTACGCTATGTTCAAGAAGTATTGCAGGCCATCCTGTTAT
. : . : . : . : . : . :
rJMFF001F14+ CCCGATGAGCACTACATTCCCACCTATCTACAACTGCACCACGGGTATATGAATGCTAAC
rJMSF037F19+ CCCGATGAGCACTACATTCCCACCTATCTACAACTGCACCACGGGTATATGAATGCTAAC
rJMFF036P15+ CCCGATGAGCACTACATTCCCACCTATCTACAACTGCACCACGGGTATATGAATGCTAAC
rJMFF035C14+ CCCGATGAGCACTACATTCCCACCTATGTACAACTGCACCACGGGTATATGAATGCTAAC
rJMSF037O18+ CCCGATGAGCACTACATTCCCACCTATCTACAACTGCACCACGGGTATATGAATGCTAAC
____________________________________________________________
consensus CCCGATGAGCACTACATTCCCACCTATCTACAACTGCACCACGGGTATATGAATGCTAAC
. : . : . : . : . : . :
rJMFF001F14+ CGAAGTGTGACTTACGTTGACTGGTCATTAGGGGGCCCTCACCCGGCATCTTACACTGCA
rJMSF037F19+ CGAAGTGTGACTTACGTTGACTGGTCATTAGGGGGCCCTCACCCGGCATCTTACACTGCA
rJMFF036P15+ CGAAGTGTGACTTACGTTGACTGGTCATTAGGGGGCCCTCACCCGGCATCTTACACTGCA
rJMFF035C14+ CGAAGTGTGACTTACGTTGACTGGTCATTAGGGGGCCCTCACCCGGCATCTTACACTGCA
rJMSF037O18+ CGAAGTGTGACTTACGTTGACTGGTCATTAGGGGGCCCTCACCCGGCATCTTACACTGCA
____________________________________________________________
consensus CGAAGTGTGACTTACGTTGACTGGTCATTAGGGGGCCCTCACCCGGCATCTTACACTGCA
. : . : . : . : . : . :
rJMFF001F14+ GCTAACATTACCGAAGGCTTCATACAGTCAATAAGGAGTAATGGCACGTCGTGTTCTTAC
rJMSF037F19+ GCTAACATTACCGAAGGCTTCATACAGTCAATAAGGAGTAATGGCACGTCGTGTTCTTAC
rJMFF036P15+ GCTAACATTACCGAAGGCTTCATACAGTCAATAAGGAGTAATGGCACGTCGTGTTCTTAC
rJMFF035C14+ GCTAACATTACCGAAGGCTTCATACAGTCAATAAGGAGTAATGGCACGTCGTGTTCTTAC
rJMSF037O18+ GCTAACATTACCGAAGGCTTCATACAGTCAATAAGGAGTAATGGCACGTCGTGTTCTTAC
rJMFF048I18+ AATAAGGAGTAATGGCACGTCGTGTTCTTAC
____________________________________________________________
consensus GCTAACATTACCGAAGGCTTCATACAGTCAATAAGGAGTAATGGCACGTCGTGTTCTTAC
. : . : . : . : . : . :
rJMFF001F14+ AATCGTGGGAAGACACAAATCTGTTATCTGTTTGCCAGAAAGTTTTTTCCAAGCGCTTTA
rJMSF037F19+ AATCGTGGGAAGACACAAATCTGTTATCTGTTTGCCAGAAAGTTTTTTCCAAGCGCTTTA
rJMFF036P15+ AATCGTGGGAAGACACAAATCTGTTATCTGTTTGCCAGAAAGTTTTTTCCAAGCGCTTTA
rJMFF035C14+ AATCGTGGGAAGACACAAATCTGTTATCTGTTTGCCAGAAAGTTTTTTCCAAGCGCTTTA
rJMSF037O18+ AATCGTGGGAAGACACAAATCTGTTATCTGTTTGCCAGAAAGTTTTTTCCAAGCGCTTTA
rJMFF048I18+ AATCGTGGGAAGACACAAATCTGTTATCTGTTTGCCAGAAAGTTTTTTCCAAGCGCTTTA
____________________________________________________________
consensus AATCGTGGGAAGACACAAATCTGTTATCTGTTTGCCAGAAAGTTTTTTCCAAGCGCTTTA
. : . : . : . : . : . :
rJMFF001F14+ GAACCATTAGAGAAACTGTCCTTGAAGGTGATGGGGTTTTAAATTTTGTCACATAGATAA
rJMSF037F19+ GAACCATTAGAGAAACTGTCCTTGAAGGTGATGGGGTTTTAAATTTTGTCACATAGATAA
rJMFF036P15+ GAACCATTAGAGAAACTGTCCTTGAAGGTGATGGGGTTTTAAATTTTGTCACATAGATAA
rJMFF035C14+ GAACCATTAGAGAAACTGTCCTTGAAGGTGATGGGGTTTTAAATTTTGTCACATAGATAA
rJMSF037O18+ GAACCATTAGAGAAACTGTCCTTGAAGGTGATGGGGTTTTAAATTTTGTCACATAGATAA
rJMFF048I18+ GAACCATTAGAGAAACTGTCCTTGAAGGTGATGGGGTTTTAAATTTTGTCACATAGATAA
____________________________________________________________
consensus GAACCATTAGAGAAACTGTCCTTGAAGGTGATGGGGTTTTAAATTTTGTCACATAGATAA
. : . : . : . : . : . :
rJMFF001F14+ AAAGGGTTGGTTTTATCAGTCTTTTCTGATTGTATTTAATGGAGCTTTTGACATAGCTA-
rJMSF037F19+ AAAGGGTTGGTTTTATCAGTCTTTTCTGATTGTATTTAATGGAGCTTTTGACATAGCTAC
rJMFF036P15+ AAAGGGTTGGTTTTATCAGTCTTTTCTGATTGTATTTAATGGAGCTTTTGACATAGCTA-
rJMFF035C14+ AAAGGGTTGGTTTTATCAGTCTTTTCTGATTGTATTTAATGGAGCTTTTGACATAGCTA-
rJMSF037O18+ AAAGGGTTGGTTTTATCAGTCTTTTCTGATTGTATTTAATGGAGCTTTTGACATAGCTA-
rJMFF048I18+ AAAGGGTTGGTTTTATCAGTCTTTTCTGATTGTATTTAATGGAGCTTTTGACATAGCTA-
____________________________________________________________
consensus AAAGGGTTGGTTTTATCAGTCTTTTCTGATTGTATTTAATGGAGCTTTTGACATAGCTA-
. : . : . : . : . : . :
rJMFF001F14+ CAGTTTTGGT-CATGTAGTTTT
rJMSF037F19+ CAGTTTTGGTCCATGTAGTTTTTGTGTTTGTTTATAGAGTACTGAAGATT
rJMFF036P15+ C
rJMFF035C14+ CAGTTTTGGT-C
rJMSF037O18+ CAGTTTTGGT-CATGTAGTTTTTGTGTTTGTTTATAGAGTACTGAAGATT
rJMFF048I18+ CAGTTTTGGT-CATGTAGTTTTTGTGTTTGTTTATAGAGTACTGAAGATTTGTTGAGAGG
____________________________________________________________
consensus CAGTTTTGGT-CATGTAGTTTTTGTGTTTGTTTATAGAGTACTGAAGATTTGTTGAGAGG