Contig 005547:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF010C01Sequence101009487 (3)802005547 (7)ref|NP_001234281.1|8e-120vacuolar H+-ATPase A1 subunit isoform [Solanum lycopersicum] gb|AAO23980.1| vacu
JMFF012E10Sequence807005547 (7)ref|NP_001234281.1|2e-122vacuolar H+-ATPase A1 subunit isoform [Solanum lycopersicum] gb|AAO23980.1| vacu
JMFF020E12Sequence115009487 (3)721005547 (7)ref|NP_001234281.1|6e-100vacuolar H+-ATPase A1 subunit isoform [Solanum lycopersicum] gb|AAO23980.1| vacu
JMFF048D09Sequence335017407ref|NP_001234287.1|2e-10vacuolar H+-ATPase A2 subunit isoform [Solanum lycopersicum] gb|AAO23981.1| vacu385005547 (7)sp|Q39291.1|VATA_BRANA2e-14RecName: Full=V-type proton ATPase catalytic subunit A; Short=V-ATPase subunit
JMSF001D16Sequence223004904 (2)emb|CDO97735.1|1e-39unnamed protein product [Coffea canephora]700005547 (7)ref|NP_001234281.1|6e-101vacuolar H+-ATPase A1 subunit isoform [Solanum lycopersicum] gb|AAO23980.1| vacu
JMSF040E10Sequence638004904 (2)gb|AAA79992.1|6e-149V-ATPase 66 kDa subunit, partial [Acer pseudoplatanus]892005547 (7)ref|NP_001234281.1|1e-140vacuolar H+-ATPase A1 subunit isoform [Solanum lycopersicum] gb|AAO23980.1| vacu
JMSF041B16Sequence141009487 (3)659005547 (7)dbj|BAA89598.1|4e-89vacuolar H+-ATPase A subunit [Citrus unshiu]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF040E10+ AAAGAACTGGGAGTGTCACCATTGTTGGGTGC
                      ____________________________________________________________
consensus AAAGAACTGGGAGTGTCACCATTGTTGGGTGC
 
. : . : . : . : . : . :
rJMSF040E10+ TGTTTCACCCCCTGGAGGGAGATTTTTCAGACCCTGTTACATCTGCAACCCTTGGTATTG
                      ____________________________________________________________
consensus TGTTTCACCCCCTGGAGGGAGATTTTTCAGACCCTGTTACATCTGCAACCCTTGGTATTG
 
. : . : . : . : . : . :
rJMSF040E10+ TTCAGGTTTTCTGGGGTCTGGACAAGAAATTGGCACAAAGGAAGCATTTTCCTTCAGTAA
rJMFF012E10+ GACAAGAAATTGNCACAAAGGAAGCATTTTCNTTCAGTAA
rJMFF010C01+ AAGGAAGCATTTTCCTTCAGTAA
                      ____________________________________________________________
consensus TTCAGGTTTTCTGGGGTCTGGACAAGAAATTGGCACAAAGGAAGCATTTTCCTTCAGTAA
 
. : . : . : . : . : . :
rJMSF040E10+ ATTGGCTGATTTCTTACTCAAAATATTCAGGGGCATTGGAGTCCTTTTATGAGAAGTTTG
rJMFF012E10+ ATTGGCTGATTTCTTACTCAAAATATTCAGGGGCATTGGAGTCCTTTTATGAGAAGTTTG
rJMFF020E12+ TGAGAAGTTTG
rJMSF001D16+ TTATGAGAAGTTTG
rJMFF010C01+ ATTGGCTGATTTCTTACTCAAAATATTCAGGGGCATTGGAGTCCTTTTATGAGAAGTTTG
                      ____________________________________________________________
consensus ATTGGCTGATTTCTTACTCAAAATATTCAGGGGCATTGGAGTCCTTTTATGAGAAGTTTG
 
. : . : . : . : . : . :
rJMSF040E10+ ATCCTGATTTCATCAGTATACGAACAAAAGCTCGTGAGGTACTGCAGAGGGAAGATGACC
rJMFF012E10+ ATCCTGATTTCATCAGTATACGAACAAAAGCTCGTGAGGTACTGCAGAGGGAAGATGACC
rJMSF041B16+ TCGTGAGGTACTGCAGAGGGAAGATGACC
rJMFF020E12+ ATCCTGATTTCATCAGTATACGAACAAAAGCTCGTGAGGTACTGCAGAGGGAAGATGACC
rJMSF001D16+ ATCCTGATTTCATCAGTATACGAACAAAAGCTCGTGAGGTACTGCAGAGGGAAGATGACC
rJMFF010C01+ ATCCTGATTTCATCAGTATACGAACAAAAGCTCGTGAGGTACTGCAGAGGGAAGATGACC
                      ____________________________________________________________
consensus ATCCTGATTTCATCAGTATACGAACAAAAGCTCGTGAGGTACTGCAGAGGGAAGATGACC
 
. : . : . : . : . : . :
rJMSF040E10+ TGAATGAAATTGTGCAGCTTGTTGGAAAGGATGCTTTAGCCGAGTCAGATAAAATTACCC
rJMFF012E10+ TGAATGAAATTGTGCAGCTTGTTGGAAAGGATGCTTTAGCCGAGTCAGATAAAATTACCC
rJMSF041B16+ TGAATGAAANTGTGCAGCTTGTTGGAAAGGATGCTTTAGCCGAGTCAGATAAAATTACCC
rJMFF020E12+ TGAATGAAATTGTGCAGCTTGTTGGAAAGGATGCTTTAGCCGAGTCAGATAAAATTACCC
rJMSF001D16+ TGAATGAAATTGTGCAGCTTGTTGGAAAGGATGCTTTAGCCGAGTCAGATAAAATTACCC
rJMFF010C01+ TGAATGAAATTGTGCAGCTTGTTGGAAAGGATGCTTTAGCCGAGTCAGATAAAATTACCC
                      ____________________________________________________________
consensus TGAATGAAATTGTGCAGCTTGTTGGAAAGGATGCTTTAGCCGAGTCAGATAAAATTACCC
 
. : . : . : . : . : . :
rJMSF040E10+ TGGAAACTGCTAAACTTTTGAGAGAGGACTACCTTGCACAAAATGCTTTTACACCATATG
rJMFF012E10+ TGGAAACTGCTAAACTTTTGAGAGAGGACTACCTTGCACAAAATGCTTTTACACCATATG
rJMSF041B16+ TGGAAACTGCTAAACTTTTGAGAGAGGACTACCTTGCACAAAATGCTTTTACACCATATG
rJMFF020E12+ TGGAAACTGCTAAACTTTTGAGAGAGGACTACCTTGCACAAAATGCTTTTACACCATATG
rJMSF001D16+ TGGAAACTGCTAAACTTTTGAGAGAGGACTACCTTGCACAAAATGCTTTTACACCATATG
rJMFF010C01+ TGGAAACTGCTAAACTTTTGAGAGAGGACTACCTTGCACAAAATGCTTTTACACCATATG
                      ____________________________________________________________
consensus TGGAAACTGCTAAACTTTTGAGAGAGGACTACCTTGCACAAAATGCTTTTACACCATATG
 
. : . : . : . : . : . :
rJMSF040E10+ ACAAATTCTGCCCATTCTACAAGTCTGTTTGGATGCTGCGGAACATCATCCATTTTTACA
rJMFF012E10+ ACAAATTCTGCCCATTCTACAAGTCTGTTTGGATGCTGCGGAACATCATCCATTTTTACA
rJMSF041B16+ ACAAATTCTGCCCATTCTACAAGTCTGTTTGGATGCTGCGGAACATCATCCATTTTTACA
rJMFF020E12+ ACAAATTCTGCCCATTCTACAAGTCTGTTTGGATGCTGCGGAACATCATCCATTTTTACA
rJMSF001D16+ ACAAATTCTGCCCATTCTACAAGTCTGTTTGGATGCTGCGGAACATCATCCATTTTTACA
rJMFF010C01+ ACAAATTCTGCCCATTCTACAAGTCTGTTTGGATGCTGCGGAACATCATCCATTTTTACA
                      ____________________________________________________________
consensus ACAAATTCTGCCCATTCTACAAGTCTGTTTGGATGCTGCGGAACATCATCCATTTTTACA
 
. : . : . : . : . : . :
rJMSF040E10+ ACTTGGCCAATCAGGCTGTTGAACGAGGAGCTGGTATGGATGGTCAGAAGATTACTTACA
rJMFF012E10+ ACTTGGCCAATCAGGCTGTTGAACGAGGAGCTGGTATGGATGGTCAGAAGATTACTTACA
rJMSF041B16+ ACTTGGCCAATCAGGCTGTTGAACGAGGAGCTGGTATGGATGGTCAGAAGATTACTTACA
rJMFF020E12+ ACTTGGCCAATCAGGCTGTTGAACGAGGAGCTGGTATGGATGGTCAGAAGATTACTTACA
rJMSF001D16+ ACTTGGCCAATCAGGCTGTTGAACGAGGAGCTGGTATGGATGGTCAGAAGATTACTTACA
rJMFF010C01+ ACTTGGCCAATCAGGCTGTTGAACGAGGAGCTGGTATGGATGGTCAGAAGATTACTTACA
                      ____________________________________________________________
consensus ACTTGGCCAATCAGGCTGTTGAACGAGGAGCTGGTATGGATGGTCAGAAGATTACTTACA
 
. : . : . : . : . : . :
rJMSF040E10+ GTTTGATTAAGCACCGCCTGGGAGATCTGTTTTACCGTTTGGTGTCTCAGAAATTTGAGG
rJMFF012E10+ GTTTGATTAAGCACCGCCTGGGAGATCTGTTTTACCGTTTGGTGTCTCAGAAATTTGAGG
rJMSF041B16+ GTTTGATTAAGCACCGCCTGGGAGATCTGTTTTACCGTTTGGTGTCTCAGAAATTTGAGG
rJMFF020E12+ GTTTGATTAAGCACCGCCTGGGAGATCTGTTTTACCGTTTGGTGTCTCAGAAATTTGAGG
rJMSF001D16+ GTTTGATTAAGCACCGCCTGGGAGATCTGTTTTACCGTTTGGTGTCTCAGAAATTTGAGG
rJMFF010C01+ GTTTGATTAAGCACCGCCTGGGAGATCTGTTTTACCGTTTGGTGTCTCAGAAATTTGAGG
rJMFF048D09+ CGTTTGGTGTCTCAGAAATGTGAGG
                      ____________________________________________________________
consensus GTTTGATTAAGCACCGCCTGGGAGATCTGTTTTACCGTTTGGTGTCTCAGAAATTTGAGG
 
. : . : . : . : . : . :
rJMSF040E10+ ATCCTGCTGAAGGAGAAGACGTCTTGGTAGGCAAGTTCAAAAAGCTTCACGAGGATTTGA
rJMFF012E10+ ATCCTGCTGAAGGAGAAGACGTCTTGGTAGGCAAGTTCAAAAAGCTTCACGAGGATTTGA
rJMSF041B16+ ATCCTGCTGAAGGAGAAGACGCCTTGGTAGGCAAGTTCAAAAAGCTTCACGAGGATTTGA
rJMFF020E12+ ATCCTGCTGAAGGAGAAGACGTCTTGGTAGGCAAGTTCAAAAAGCTTCACGAGGATTTGA
rJMSF001D16+ ATCCTGCTGAAGGAGAAGACGTCTTGGTAGGCAAGTTCAAAAAGCTTCACGAGGATTTGA
rJMFF010C01+ ATCCTGCTGAAGGAGAAGACGTCTTGGTAGGCAAGTTCAAAAAGCTTCACGAGGATTTGA
rJMFF048D09+ ATCCTGCTGAAGGAGAAGACGTCTTGGTAGGCAAGTTCAAAAAGCTTCACGAGGATTTGA
                      ____________________________________________________________
consensus ATCCTGCTGAAGGAGAAGACGTCTTGGTAGGCAAGTTCAAAAAGCTTCACGAGGATTTGA
 
. : . : . : . : . : . :
rJMSF040E10+ TTTCTGGATTCCGCAACCTTGAAGATGAAACTCGATGATCAGTGTTTGAGCATCAAATCT
rJMFF012E10+ TTTCTGGATTCCGCAACCTTGAAGATGAAACTCGATGATCAGTGTTTGAGCATCAAATCT
rJMSF041B16+ TTTCTGGATTCCGCAACCTTGAAGATGAAACTCGATGATCAGTGTTTGAGCATCAAATCT
rJMFF020E12+ TTTCTGGATTCCGCAACCTTGAAGATGAAACTCGATGATCAGTGTTTGAGCATCAAATCT
rJMSF001D16+ TTTCTGGATTCCGCAACCTTGAAGATGAAACTCGATGATCAGTGTTTGAGCATCAAATCT
rJMFF010C01+ TTTCTGGATTCCGCAACCTTGAAGATGAAACTCGATGATCAGTGTTTGAGCATCAAATCT
rJMFF048D09+ TTTCTGGATTCCGCAACCTTGAAGATGAAACTCGATGATCAGTGTTTGAGCATCAAATCT
                      ____________________________________________________________
consensus TTTCTGGATTCCGCAACCTTGAAGATGAAACTCGATGATCAGTGTTTGAGCATCAAATCT
 
. : . : . : . : . : . :
rJMSF040E10+ TTGGAGACATTAGCTCTTCACTCTCAGTAAACAAGGTTTTGTATTGTATTTATTTGGTGT
rJMFF012E10+ TTGGAGACATTAGCTCTTCACTCTCAGTAAACAAGGTTTTGTATTGTATTTATTTGGTGT
rJMSF041B16+ TTGGAGACATTAGCTCTTCACTCTCAGTAAACAAGGTTTTGTATTGTATTTATTTGGTGT
rJMFF020E12+ TTGGAGACATTAGCTCTTCACTCTCAGTAAACAAGGTTTTGTATTGTATTTATTTGGTGT
rJMSF001D16+ TTGGAGACATTAGCTCTTCACTCTCAGTAAACAAGGTTTTGTATTGTATTTATTTGGTGT
rJMFF010C01+ TTGGAGACATTAGCTCTTCACTCTCAGTAAACAAGGTTTTGTATTGTATTTATTTGGTGT
rJMFF048D09+ TTGGAGACATTAGCTCTTCACTCTCAGTAAACAAGGTTTTGTATTGTATTTATTTGGTGT
                      ____________________________________________________________
consensus TTGGAGACATTAGCTCTTCACTCTCAGTAAACAAGGTTTTGTATTGTATTTATTTGGTGT
 
. : . : . : . : . : . :
rJMSF040E10+ GATGAGTCAATCATGTTCGACATCACGATGCATATTTAGTTTTATAATCCAGGGGAGAAG
rJMFF012E10+ GATGAGTCAATCATGTTCGACATCACGATGCATATTTAGTTTTATAATCCAGGGGAGAAG
rJMSF041B16+ GATGAGTCAATCATGTTCGACATCACGATGCATATTTAGTTTTATAATCCAGGGGAGAAG
rJMFF020E12+ GATGAGTCAATCATGTTCGACATCACGATGCATATTTAGTTTTATAATCCAGGGGAGAAG
rJMSF001D16+ GATGAGTCAATCATGTTCGACATCACGATGCATATTTAGTTTTATAATCCAGGGGAGAAG
rJMFF010C01+ GATGAGTCAATCATGTTCGACATCACGATGCATATTTAGTTTTATAATCCAGGGGAGAAG
rJMFF048D09+ GATGAGTCAATCATGTTCGACATCACGATGCATATTTAGTTTTATAATCCAGGGGAGAAG
                      ____________________________________________________________
consensus GATGAGTCAATCATGTTCGACATCACGATGCATATTTAGTTTTATAATCCAGGGGAGAAG
 
. : . : . : . : . : . :
rJMSF040E10+ TGAGAAATAAAAGGAACTAAGTAATGGTTGTATGGGCATTGCATTATGTAGCTTGTCGAA
rJMFF012E10+ TGAGAAATAAAAGGAACTAAGTAATGGTTGTATGGGCATTGCATTATGTAGCTTGTCGAA
rJMSF041B16+ TGAGAAATAAAAGGAACTAAGTAATGGTTGTATGGGCATTGCATTATGTAGCTTGTCGAA
rJMFF020E12+ TGAGAAATAAAAGGAACTAAGTAATGGTTGTATGGGCATTGCATTATGTAGCTTGTCGAA
rJMSF001D16+ TGAGAAATAAAAGGAACTAAGTAATGGTTGTATGGGCATTGCATTATGTAGCTTGTCGAA
rJMFF010C01+ TGAGAAATAAAAGGAACTAAGTAATGGTTGTATGGGCATTGCATTATGTAGCTTGTCGAA
rJMFF048D09+ TGAGAAATAAAAGGAACTAAGTAATGGTTGTATGGGCATTGCATTATGTAGCTTGTCGAA
                      ____________________________________________________________
consensus TGAGAAATAAAAGGAACTAAGTAATGGTTGTATGGGCATTGCATTATGTAGCTTGTCGAA
 
. : . : . : . : . : . :
rJMSF040E10+ TAATTTTTGTTTTCTGCATT
rJMFF012E10+ TAATTTTTGTTTTCTGCATTTGTTTGTTCTCTANCATAATAAAGAAT
rJMSF041B16+ TAATTTTTGTTTTCTGCATT
rJMFF020E12+ TAATTTTTGTTTTCTGCATTTGTTTGTTCTCTATCATAATAAAGAAT
rJMSF001D16+ TAATTTTTGTTTTCTGCATT
rJMFF010C01+ TAATTTTTGTTTTCTGCATTTGTTTGTTCTCTATCATAATAAAGAATCAGGC
rJMFF048D09+ TAATTTTTGTTTTCTGCATTTGTTTGTTCTCTATCATAATAAAGAATCAGGCTGCAATTC
                      ____________________________________________________________
consensus TAATTTTTGTTTTCTGCATTTGTTTGTTCTCTATCATAATAAAGAATCAGGCTGCAATTC