Contig 005545:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF011J15Sequence519012848 (5)ref|XP_009592052.1|2e-05PREDICTED: pyruvate kinase isozyme A, chloroplastic [Nicotiana tomentosiformis]695005545 (5)ref|XP_008353310.1|2e-125PREDICTED: LOW QUALITY PROTEIN: pyruvate kinase isozyme A, chloroplastic-like [
JMFF045B21Sequence637012848 (5)ref|XP_009592052.1|2e-30PREDICTED: pyruvate kinase isozyme A, chloroplastic [Nicotiana tomentosiformis]621005545 (5)ref|XP_011091081.1|1e-102PREDICTED: pyruvate kinase isozyme A, chloroplastic [Sesamum indicum]
JMFF047J22Sequence558012848 (5)ref|XP_009592052.1|2e-34PREDICTED: pyruvate kinase isozyme A, chloroplastic [Nicotiana tomentosiformis]522005545 (5)ref|XP_011091081.1|3e-81PREDICTED: pyruvate kinase isozyme A, chloroplastic [Sesamum indicum]
JMFF048B03Sequence391012848 (5)ref|XP_006362155.1|1e-07PREDICTED: pyruvate kinase isozyme A, chloroplastic-like [Solanum tuberosum]253005545 (5)ref|XP_002311649.2|1e-20pyruvate phosphotransferase family protein [Populus trichocarpa] gb|EEE89016.2|
JMSF008D15Sequence242012848 (5)774005545 (5)ref|XP_011091081.1|9e-148PREDICTED: pyruvate kinase isozyme A, chloroplastic [Sesamum indicum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF008D15+ GGCATCAGATGGAGCTATGGTGGCGAGAGGAGAT
                      ____________________________________________________________
consensus GGCATCAGATGGAGCTATGGTGGCGAGAGGAGAT
 
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rJMSF008D15+ CTCGGTGCTCAGATCCCATTGGAACAGGTTCCGTTGCAACAGCAAAGGATTGTTCGGATT
                      ____________________________________________________________
consensus CTCGGTGCTCAGATCCCATTGGAACAGGTTCCGTTGCAACAGCAAAGGATTGTTCGGATT
 
. : . : . : . : . : . :
rJMSF008D15+ TGCAGGCAGTTAAATAAGCCCGTTATCGTTGCTTCTCAGTTGCTCGATTCTATGATAGAA
rJMFF011J15+ CAGGCAGTTAAATAAGCCCGTTATCGTTGCTTCTCAGTTGCTCGATTCTATGATAGAA
                      ____________________________________________________________
consensus TGCAGGCAGTTAAATAAGCCCGTTATCGTTGCTTCTCAGTTGCTCGATTCTATGATAGAA
 
. : . : . : . : . : . :
rJMSF008D15+ TACCCTATTCCTACGAGGGCCGAAGTGGCTGATGTTTCGGAAGCGGTTAGGCAAAGGGCG
rJMFF011J15+ TACCCTATTCCTACGAGGGCCGAAGTGGCTGATGTTTCGGAAGCGGTTAGGCAAAGGGCG
rJMFF045B21+ TCGGAAGCGGTTAGGCAAAGGGCG
                      ____________________________________________________________
consensus TACCCTATTCCTACGAGGGCCGAAGTGGCTGATGTTTCGGAAGCGGTTAGGCAAAGGGCG
 
. : . : . : . : . : . :
rJMSF008D15+ GATGCCTTGATGCTCTCTGGCGAGTCGGCAATGGGCCAGTATCCCGACAAAGCATTGGCT
rJMFF011J15+ GATGCCTTGATGCTCTCTGGCGAGTCGGCAATGGGCCAGTATCCCGACAAAGCATTGGCT
rJMFF045B21+ GATGCCTTGATGCTCTCTGGCGAGTCGGCAATGGGCCAGTATCCCGACAAAGCATTGGCT
                      ____________________________________________________________
consensus GATGCCTTGATGCTCTCTGGCGAGTCGGCAATGGGCCAGTATCCCGACAAAGCATTGGCT
 
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rJMSF008D15+ GTCGTAAGGACTGTTAGTTTGAGAATCGAGAGGCAGTGGAGAGAAAAGAAACAACACGAG
rJMFF011J15+ GTCGTAAGGACTGTTAGTTTGAGAATCGAGAGGCAGTGGAGAGAAAAGAAACAACACGAG
rJMFF045B21+ GTCGTAAGGACTGTTAGTNTGAGAATCGAGAGGCAGTGGAGAGAAAAGAAACAACACGAG
rJMFF047J22+ TGAGAATCGAGAGGCAGTGGAGAGAAAAGAAACAACACGAG
                      ____________________________________________________________
consensus GTCGTAAGGACTGTTAGTTTGAGAATCGAGAGGCAGTGGAGAGAAAAGAAACAACACGAG
 
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rJMSF008D15+ GCCATAGAATTCCCGTCTATTGCATCTTCATTTGGAGATAGAATATCAGAAGAGATTTGC
rJMFF011J15+ GCCATAGAATTCCCGTCTATTGCATCTTCATTTGGAGATAGAATATCAGAAGAGATTTGC
rJMFF045B21+ GCCATAGAATTCCCGTCTATTGCATCTTCATTTGGAGATAGAATATCAGAAGAGATTTGC
rJMFF047J22+ GCCATAGAATTCCCGTCTATTGCATCTTCATTTGGAGATAGAATATCAGAAGAGATTTGC
                      ____________________________________________________________
consensus GCCATAGAATTCCCGTCTATTGCATCTTCATTTGGAGATAGAATATCAGAAGAGATTTGC
 
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rJMSF008D15+ AATTCTGCTGCCAAGATGGCTAACCATTTGGAGGTCGATGCTATTTTTGTGTACACCAAG
rJMFF011J15+ AATTCTGCTGCCAAGATGGCTAACCATTTGGAGGTCGATGCTATTTTTGTGTACACCAAG
rJMFF045B21+ AATTCTGCTGCCAAGATGGCTAACCATTTGGAGGTCGATGCTATTTTTGTGTACACCAAG
rJMFF047J22+ AATTCTGCTGCCAAGATGGCTAACCATTTGGAGGTCGATGCTATTTTTGTGTACACCAAG
                      ____________________________________________________________
consensus AATTCTGCTGCCAAGATGGCTAACCATTTGGAGGTCGATGCTATTTTTGTGTACACCAAG
 
. : . : . : . : . : . :
rJMSF008D15+ GATGGACACATGGCTTCTCTCCTATCACGCTGTCGTCCCGACTGCCCCATATTCGCGTTT
rJMFF011J15+ GATGGACACATGGCTTCTCTCCTATCACGCTGTCGTCCCGACTGCCCCATATTCGCGTTT
rJMFF045B21+ GATGGACACATGGCTTCTCTCCTATCACGCTGTCGTCCCGACTGCCCCATATTCGCGTTT
rJMFF047J22+ GATGGACACATGGCTTCTCTCCTATCACGCTGTCGTCCCGACTGCCCCATATTCGCGTTT
                      ____________________________________________________________
consensus GATGGACACATGGCTTCTCTCCTATCACGCTGTCGTCCCGACTGCCCCATATTCGCGTTT
 
. : . : . : . : . : . :
rJMSF008D15+ ACAGACACAACGTCCACGCGTAGGCGCCTGAACCTGCAATGGGGTCTGATTCCCTTTCGC
rJMFF011J15+ ACAGACACAACGTCCACGCGTAGGCGCCTGAACCTGCAATGGGGTCTGATTCCCTTTCGC
rJMFF045B21+ ACAGACACAACGTCCACGCGTAGGCGCCTGAACCTGCAATGGGGTCTGATTCCCTTTCGC
rJMFF047J22+ ACAGACACAACGTCCACGCGTAGGCGCCTGAACCTGCAATGGGGTCTGATTCCCTTTCGC
rJMFF048B03+ GATTCCCTTTCGC
                      ____________________________________________________________
consensus ACAGACACAACGTCCACGCGTAGGCGCCTGAACCTGCAATGGGGTCTGATTCCCTTTCGC
 
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rJMSF008D15+ GTGAATTTCTCCGACGATATGGAAACCAACCTGAACAAAACCTTTTCCCTGCTAAAGGCC
rJMFF011J15+ GTGAATTTCTCCGACGATATGGAAACCAACCTGAACAAAACCTTTTCCCTGCTAAAGGCC
rJMFF045B21+ GTGAATTTCTCCGACGATATGGAAACCAACCTGAACAAAACCTTTTCCCTGCTAAAGGCC
rJMFF047J22+ GTGAATTTCTCCGACGATATGGAAACCAACCTGAACAAAACCTTTTCCCTGCTAAAGGCC
rJMFF048B03+ GTGAATTTCTCCGACGATATGGAAACCAACCTGAACAAAACCTTTTCCCTGCTAAAGGCC
                      ____________________________________________________________
consensus GTGAATTTCTCCGACGATATGGAAACCAACCTGAACAAAACCTTTTCCCTGCTAAAGGCC
 
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rJMSF008D15+ CGCGGCATGATAAAATCAGGTGATCTAGTTATCGCTGTATCTGACATGCTGCAATCTATT
rJMFF011J15+ CGCGGCATGATAAAATCAGGTGATCTAGTTATCGCTGTATCTGACNTGCTGCAATCTATT
rJMFF045B21+ CGCGGCATGATAAAATCAGGTGATCTAGTTATCGCTGTATCTGACATGCTGCAATCTATT
rJMFF047J22+ CGCGGCATGATAAAATCAGGTGATCTAGTTATCGCTGTATCTGACATGCTGCAATCTATT
rJMFF048B03+ CGCGGCATGATAAAATCAGGTGATCTAGTTATCGCTGTATCTGAGTTGCTGCAATCTATT
                      ____________________________________________________________
consensus CGCGGCATGATAAAATCAGGTGATCTAGTTATCGCTGTATCTGACATGCTGCAATCTATT
 
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rJMSF008D15+ CAAGTCATGGATGTTCCATAAGAATGCATATCTTTAGAGTACTTTATGTTACCAGAAATA
rJMFF011J15+ CAAGTCATGGATGTTCCATAAGAATGCATATCTTTAGAGTACTTTATGTTACCAGAAATA
rJMFF045B21+ CAAGTCATGGATGTTCCATAAGAATGCATATCTTTAGAGTACTTTATGTTACCAGAAATA
rJMFF047J22+ CAAGTCATGGATGTTCCATAAGAATGCATATCTTTAGAGTACTTTATGTTACCAGAAATA
rJMFF048B03+ CAAGTCATGGATGTTCCATAAGAATGCATATCTTTAGAGTACTTTATGTTACCAGAAATA
                      ____________________________________________________________
consensus CAAGTCATGGATGTTCCATAAGAATGCATATCTTTAGAGTACTTTATGTTACCAGAAATA
 
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rJMSF008D15+ ATAGTCACAACT
rJMFF011J15+ ATAGTCACAACTTGAAGCTTATTAGCACCATTATATA
rJMFF045B21+ ATAGTCACAACTTGAAGCTTATTAGCACCATTATATATTATGCTGTTTTTTCTTG
rJMFF047J22+ ATAGTCACAACTTGAAGCTTATTAGCACCATTATATATTATGCTGTTTTTTCTTG
rJMFF048B03+ ATAGTCACAACTTGAAGCTTATTAGCACCATTATATATTATGCTGTTTTTTCTTGTCCAG
                      ____________________________________________________________
consensus ATAGTCACAACTTGAAGCTTATTAGCACCATTATATATTATGCTGTTTTTTCTTGTCCAG