| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF015E21 | Sequence | 547 | 003759 (8) | ref|XP_009619497.1| | 2e-77 | PREDICTED: mannan endo-1,4-beta-mannosidase 7-like [Nicotiana tomentosiformis] | 551 | 005543 (7) | ref|XP_009762330.1| | 4e-39 | PREDICTED: mannan endo-1,4-beta-mannosidase 7-like [Nicotiana sylvestris] |
| JMFF032I18 | Sequence | 623 | 003759 (8) | ref|XP_009619497.1| | 7e-90 | PREDICTED: mannan endo-1,4-beta-mannosidase 7-like [Nicotiana tomentosiformis] | 715 | 005543 (7) | ref|XP_009762330.1| | 2e-41 | PREDICTED: mannan endo-1,4-beta-mannosidase 7-like [Nicotiana sylvestris] |
| JMFF047M16 | Sequence | 477 | 003759 (8) | ref|XP_009619497.1| | 2e-62 | PREDICTED: mannan endo-1,4-beta-mannosidase 7-like [Nicotiana tomentosiformis] | 344 | 005543 (7) | |||
| JMSF002K04 | Sequence | 366 | 003759 (8) | ref|XP_003612065.1| | 2e-37 | Mannan endo-1,4-beta-mannosidase [Medicago truncatula] gb|AES95023.1| mannan end | 713 | 005543 (7) | ref|XP_009762330.1| | 2e-58 | PREDICTED: mannan endo-1,4-beta-mannosidase 7-like [Nicotiana sylvestris] |
| JMSF028K09 | Sequence | 656 | 003759 (8) | ref|XP_009619497.1| | 1e-102 | PREDICTED: mannan endo-1,4-beta-mannosidase 7-like [Nicotiana tomentosiformis] | 781 | 005543 (7) | ref|XP_009762330.1| | 7e-58 | PREDICTED: mannan endo-1,4-beta-mannosidase 7-like [Nicotiana sylvestris] |
| JMSF033K01 | Sequence | 656 | 003759 (8) | ref|XP_009619497.1| | 1e-102 | PREDICTED: mannan endo-1,4-beta-mannosidase 7-like [Nicotiana tomentosiformis] | 759 | 005543 (7) | ref|XP_009762330.1| | 4e-58 | PREDICTED: mannan endo-1,4-beta-mannosidase 7-like [Nicotiana sylvestris] |
| JMSF051C11 | Sequence | 686 | 003759 (8) | ref|XP_009619497.1| | 1e-112 | PREDICTED: mannan endo-1,4-beta-mannosidase 7-like [Nicotiana tomentosiformis] | 744 | 005543 (7) | ref|XP_009762330.1| | 1e-73 | PREDICTED: mannan endo-1,4-beta-mannosidase 7-like [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
rJMSF051C11+ TCTCAATGCAT
____________________________________________________________
consensus TCTCAATGCAT
. : . : . : . : . : . :
rJMSF051C11+ TCAACATAGGAACAGACTTCATTGCAAACAATCAAATCCCCACCATCGATTTCGCCACCA
____________________________________________________________
consensus TCAACATAGGAACAGACTTCATTGCAAACAATCAAATCCCCACCATCGATTTCGCCACCA
. : . : . : . : . : . :
rJMSF051C11+ CCCACTCCTATCCCGATCAATGGATGTCCAGCTCAGATGACCAAAGCCAGCTAGCTTTCC
rJMSF002K04+ TATCCCGATCAATGGATGTCCAGCTCAGATGACCAAAGCCAGCTAGCTTTCC
rJMSF033K01+ TATCCCGATCAATGGATGTCCAGCTCAGATGACCAAAGCCAGCTAGCTTTCC
rJMSF028K09+ GATGTCCAGCTCAGATGACCAAAGCCAGCTAGCTTTCC
____________________________________________________________
consensus CCCACTCCTATCCCGATCAATGGATGTCCAGCTCAGATGACCAAAGCCAGCTAGCTTTCC
. : . : . : . : . : . :
rJMSF051C11+ TGAGAAACTGGCTGAATGCCCACATCGAAGACTCTCAGTACATTCTCAAGAAGCCATTGC
rJMSF002K04+ TGAGAAACTGGCTGAATGCCCACATCGAAGACTCTCAGTACATTCTCAAGAAGCCATTGC
rJMSF033K01+ TGAGAAACTGGCTGAATGCCCACATCGAAGACTCTCAGTACATTCTCAAGAAGCCATTGC
rJMSF028K09+ TGAGGAACTGGCTGAATGCCCACATCGAAGACTCTCAGTACATTCTCAAGAAGCCATTGC
rJMFF032I18+ AAGAAGCCATTGC
____________________________________________________________
consensus TGAGAAACTGGCTGAATGCCCACATCGAAGACTCTCAGTACATTCTCAAGAAGCCATTGC
. : . : . : . : . : . :
rJMSF051C11+ TAATTGCAGAGTTTGGGAAATCCTGGAAAGACCCAGGCTTTAACCCAACCCAGAGGGACG
rJMFF015E21+ ATTGCAGAGTTTGGGAAATCCTGGAAAGACCCAGGCTTTAACCCAACCCAGAGGGACG
rJMSF002K04+ TAATTGCAGAGTTTGGGAAATCCTGGAAAGACCCAGGCTTTAACCCAACCCAGAGGGACG
rJMSF033K01+ TAATTGCAGAGTTTGGGAAATCCTGGAAAGACCCAGGCTTTAACCCAACCCAGAGGGACG
rJMSF028K09+ TAATTGCAGAGTTTGGGAAATCCTGGAAAGACCCAGGCTTTAACCCAACCCAGAGGGACG
rJMFF032I18+ TAATTGCAGAGTTTGGGAAATCCTGGAAAGACCCAGGCTTTAACCCAACCCAGAGGGACG
____________________________________________________________
consensus TAATTGCAGAGTTTGGGAAATCCTGGAAAGACCCAGGCTTTAACCCAACCCAGAGGGACG
. : . : . : . : . : . :
rJMSF051C11+ CTCTCTACAGAACTGTATACTACACCATATACTCGTCGGCAAAGCGCGGCGGCGCAGCCG
rJMFF015E21+ CTCTNTACAGAACTGTATACTACACCATATACTCGTCGGCAAAGCGCGGCGGCGCAGCCG
rJMSF002K04+ CTCTCTACAGAACTGTATACTACACCATATACTCGTCGGCAAAGCGCGGCGGCGCAGCCG
rJMSF033K01+ CTCTCTACAGAACTGTATACTACACCATATACTCGTCGGCAAAGCGCGGCGGCGCAGCCG
rJMSF028K09+ CTCTCTACAGAACTGTATACTACACCATATACTCGTCGGCAAAGCGCGGCGGCGCAGCCG
rJMFF032I18+ CTCTNTACAGAACTGTATACTACACCATATACTCGTCGGCAAAGCGCGGCGGCGCAGCCG
____________________________________________________________
consensus CTCTCTACAGAACTGTATACTACACCATATACTCGTCGGCAAAGCGCGGCGGCGCAGCCG
. : . : . : . : . : . :
rJMSF051C11+ CCGGAGGCCTTTTCTGGCAACTGTTAACCGACGGAATGGACAACTTCCGGGATGGGTATG
rJMFF015E21+ CCGGAGGCCTTTTCTGGCAACTGTTAACCGACGGAATAGACAACTTCCGGGATGGGTATG
rJMSF002K04+ CCGGAGGCCTTTTCTGGCAACTGTTAACCGACGGAATGGACAACTTCCGGGATGGGTATG
rJMSF033K01+ CCGGAGGCCTTTTCTGGCAACTGTTAACCGACGGAATGGACAACTTCCGGGATGGGTATG
rJMSF028K09+ CCGGAGGCCTTTTCTGGCAACTGTTAACCGACGGAATGGACAACTTCCGGGATGGGTATG
rJMFF032I18+ CCGGAGGCCTTTTCTGGCAACTGTTAACCGACGGAATGGACAACTTCCGGGATGGGTATG
____________________________________________________________
consensus CCGGAGGCCTTTTCTGGCAACTGTTAACCGACGGAATGGACAACTTCCGGGATGGGTATG
. : . : . : . : . : . :
rJMSF051C11+ AGATATTGCTAAGCCAGAGGACTTCCACTGCAAATTTGATTTCTCAGCAGTGCCACAAGC
rJMFF015E21+ AGATATTGCTAAGCCAGAGGACTTCCACTGCAAATTTGATTTCTCAGCAGTGCCACAAGC
rJMSF002K04+ AGATATTGCTAAGCCAGAGGACTTCCACTGCAAATTTGATTTCTCAGCAGTGCCACAAGC
rJMSF033K01+ AGATATTGCTAAGCCAGAGGACTTCCACTGCAAATTTGATTTCTCAGCAGTGCCACAAGC
rJMSF028K09+ AGATATTGCTAAGCCAGAGGACTTCCACTGCAAATTTGATTTCTCAGCAGTGCCACAAGC
rJMFF032I18+ AGATATTGCTAAGCCAGAGGACTTCCACTGCAAATTTGATTTCTCAGCAGTGCCACAAGC
____________________________________________________________
consensus AGATATTGCTAAGCCAGAGGACTTCCACTGCAAATTTGATTTCTCAGCAGTGCCACAAGC
. : . : . : . : . : . :
rJMSF051C11+ TTTCCCAGATCAGGAGAATATTTGCCAGGATGAAAAACCTTGGTAGGCTGAGAAGAGCCA
rJMFF015E21+ TTTCCCAGATCAGGAGAATATTTGCCAGGATGAAAAACCTTGGTAGGCTGAGAAGAGCCA
rJMSF002K04+ TTTCCCAGATCAGGAGAATATTTGCCAGGATGAAAAACCTTGGTAGGCTGAGAAGAGCCA
rJMSF033K01+ TTTCCCAGATCAGGAGAATATTTGCCAGGATGAAAAACCTTGGTAGGCTGAGAAGAGCCA
rJMSF028K09+ TTTCCCAGATCAGGAGAATATTTGCCAGGATGAAAAACCTTGGTAGGCTGAGAAGAGCCA
rJMFF032I18+ TTTCCCAGATCAGGAGAATATTTGCCAGGANGAAAAACCTTGGTAGGCTGAGAAGAGCCA
____________________________________________________________
consensus TTTCCCAGATCAGGAGAATATTTGCCAGGATGAAAAACCTTGGTAGGCTGAGAAGAGCCA
. : . : . : . : . : . :
rJMSF051C11+ AAGCTAATAGGGGGAAGCAAATTGGGAACTGATAGATACAACACGTTTGGTTCACAGAAT
rJMFF015E21+ AAGCTAATAGGGGGAAGCAAATTGGGAACTGATAGATACAACACGTTTGGTTCACAGAAT
rJMSF002K04+ AAGCTAATAGGGGGAAGCAAATTGGGAACTGATAGATACAACACGTTTGGTTCACAGAAT
rJMSF033K01+ AAGCTAATAGGGGGAAGCAAATTGGGAACTGATAGATACAACACGTTTGGTTCACAGAAT
rJMSF028K09+ AAGCTAATAGGGGGAAGCAAATTGGGAACTGATAGATACAACACGTTTGGTTCACAGAAT
rJMFF032I18+ AAGCTAATAGGGGGAAGCAAATTGGGAACTGATAGATACAACACGTNTGGTTCACAGAAT
____________________________________________________________
consensus AAGCTAATAGGGGGAAGCAAATTGGGAACTGATAGATACAACACGTTTGGTTCACAGAAT
. : . : . : . : . : . :
rJMSF051C11+ GATACAGTATTTCGGTATAAGTTATTACTAATTTATTCTCGGAAATACTATTCCCGAGAA
rJMFF015E21+ GATACAGTATTTCGGTATAAGTTATTACTAATTTATTCTCGGAAATACTATTCCCGAGAA
rJMSF002K04+ GATACAGTATTTCGGTATAAGTTATTACTAATTTATTCTCGGAAATACTATTCCCGAGAA
rJMSF033K01+ GATACAGTATTTCGGTATAAGTTATTACTAATTTATTCTCGGAAATACTATTCCCGAGAA
rJMSF028K09+ GATACAGTATTTCGGTATAAGTTATTACTAATTTATTCTCGGAAATACTATTCCCGAGAA
rJMFF032I18+ GATACAGTANTTCGGTATAAGTTATTACTAATTTATTCTCGGAAATACTATTCCCGAGAA
____________________________________________________________
consensus GATACAGTATTTCGGTATAAGTTATTACTAATTTATTCTCGGAAATACTATTCCCGAGAA
. : . : . : . : . : . :
rJMSF051C11+ TAAGATAATTACTAGATTAATATAGTGTGTTTACTGGTGAGAGAATTTGTGGGAGTGAAT
rJMFF015E21+ TAAGATAATTACTAGATTAATATAGTGTGTTTACTGGTGAGAGAATTTGTGGGAGTGAAT
rJMSF002K04+ TAAGATAATTACTAGATTAATATAGTGTGTTTACTGGTGAGAGAATTTGTGGGAGTGAAT
rJMSF033K01+ TAAGATAATTACTAGATTAATATAGTGTGTTTACTGGTGAGAGAATTTGTGGGAGTGAAT
rJMSF028K09+ TAAGATAATTACTAGATTAATATAGTGTGTTTACTGGTGAGAGAATTTGTGGGAGTGAAT
rJMFF032I18+ TAAGATAATTACTAGATTAATATAGTGTGTTTACTGGTGAGAGAATTTGTGGGAGTGAAT
rJMFF047M16+ TTAATATAGTGTGTTTACTGGTGAGAGAATTTGTGGGAGTGAAT
____________________________________________________________
consensus TAAGATAATTACTAGATTAATATAGTGTGTTTACTGGTGAGAGAATTTGTGGGAGTGAAT
. : . : . : . : . : . :
rJMSF051C11+ TTTCTCTCTTAGAGATGAATGTTGGAATGGGGTTCATCCAGGAGGGGAATAGTAGGATTA
rJMFF015E21+ TTTCTCTCTTAGAGATGAATGTTGGAATGGGGTTCATCCAGGAGGGGAATAGTAGGATTA
rJMSF002K04+ TTTCTCTCTTAGAGATGAATGTTGGAATGGGGTTCATCCAGGAGGGGAATAGTAGGATTA
rJMSF033K01+ TTTCTCTCTTAGAGATGAATGTTGGAATGGGGTTCATCCAGGAGGGGAATAGTAGGATTA
rJMSF028K09+ TTTCTCTCTTAGAGATGAATGTTGGAATGGGGTTCATCCAGGAGGGGAATAGTAGGATTA
rJMFF032I18+ TTTCTCTNTTAGAGATGAATGTTGGAATGGGGTTCATCCAGGAGGGGAATAGTAGGATTA
rJMFF047M16+ TTTCTCTCTTAGAGATGAATGTTGGAATGGGGTTCATCCAGGAGGGGAATAGTAGGATTA
____________________________________________________________
consensus TTTCTCTCTTAGAGATGAATGTTGGAATGGGGTTCATCCAGGAGGGGAATAGTAGGATTA
. : . : . : . : . : . :
rJMSF051C11+ GCAGAGACTCGTG
rJMFF015E21+ GCAGAGACTCGTG
rJMSF002K04+ GCAGAGACTCGTGTTTTTCTGAATCCTAAATCCATATAATTACTAGACTAAGAATGTTTT
rJMSF033K01+ GCAGAGACTCGTGTTTTTCTGAATCCTAAATCCATATAATTACTAGACTAAGAATGTTTT
rJMSF028K09+ GCAGAGACTCGTGTTTTTCTGAATCCTAAATCCATATAATTACTAGACTAAGAATGTTTT
rJMFF032I18+ GCAGAGACTCGTGTTTTTCTGAATCCTAAATCCATATAATTACTAGACTAAGAATGTTTT
rJMFF047M16+ GCAGAGACTCGTGTTTTTCTGAATCCTAAATCCATATAATTACTAGACTAAGAATGTTTT
____________________________________________________________
consensus GCAGAGACTCGTGTTTTTCTGAATCCTAAATCCATATAATTACTAGACTAAGAATGTTTT
. : . : . : . : . : . :
rJMSF002K04+ T
rJMSF033K01+ TTAATGTGTGGTAATACTAATTAATGGGGGAAGCCT
rJMSF028K09+ TTAATGTGTGGTAATACTAATTAATGGGGGAAGCCTCTGAGTTTATGTATGTTATGTCAT
rJMFF032I18+ TTAATGTGTGGTAATACTAATTAATGGGGGAAGCCTNTGAGTTTATGTATGTTATGTCAT
rJMFF047M16+ TTAATGTGTGGTAATACTAATTAATGGGGGAAGCCTCTGAGTTTATGTATGTTATGTCAT
____________________________________________________________
consensus TTAATGTGTGGTAATACTAATTAATGGGGGAAGCCTCTGAGTTTATGTATGTTATGTCAT
. : . : . : . : . : . :
rJMSF028K09+ ATATGTAAC
rJMFF032I18+ ATANGTAACTGTGGCAGTTCAATGCAATTCAAAGCATATCAG
rJMFF047M16+ ATATGTAACTGTGGCAGTTGAATGCAATTCAAAGCATATCAGTTTTATTTTATTCXXXXX
____________________________________________________________
consensus ATATGTAACTGTGGCAGTTGAATGCAATTCAAAGCATATCAGTTTTATTTTATTCNNNNN
. : . : . : . : . : . :
rJMFF047M16+ XXXXXXXXXXXXXXXXXXTAAAAAAAAAAAAAAAACTCTCCAGGTTGATCCGCCATAAGG
____________________________________________________________
consensus NNNNNNNNNNNNNNNNNNTAAAAAAAAAAAAAAAACTCTCCAGGTTGATCCGCCATAAGG