Contig 005543:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF015E21Sequence547003759 (8)ref|XP_009619497.1|2e-77PREDICTED: mannan endo-1,4-beta-mannosidase 7-like [Nicotiana tomentosiformis]551005543 (7)ref|XP_009762330.1|4e-39PREDICTED: mannan endo-1,4-beta-mannosidase 7-like [Nicotiana sylvestris]
JMFF032I18Sequence623003759 (8)ref|XP_009619497.1|7e-90PREDICTED: mannan endo-1,4-beta-mannosidase 7-like [Nicotiana tomentosiformis]715005543 (7)ref|XP_009762330.1|2e-41PREDICTED: mannan endo-1,4-beta-mannosidase 7-like [Nicotiana sylvestris]
JMFF047M16Sequence477003759 (8)ref|XP_009619497.1|2e-62PREDICTED: mannan endo-1,4-beta-mannosidase 7-like [Nicotiana tomentosiformis]344005543 (7)
JMSF002K04Sequence366003759 (8)ref|XP_003612065.1|2e-37Mannan endo-1,4-beta-mannosidase [Medicago truncatula] gb|AES95023.1| mannan end713005543 (7)ref|XP_009762330.1|2e-58PREDICTED: mannan endo-1,4-beta-mannosidase 7-like [Nicotiana sylvestris]
JMSF028K09Sequence656003759 (8)ref|XP_009619497.1|1e-102PREDICTED: mannan endo-1,4-beta-mannosidase 7-like [Nicotiana tomentosiformis]781005543 (7)ref|XP_009762330.1|7e-58PREDICTED: mannan endo-1,4-beta-mannosidase 7-like [Nicotiana sylvestris]
JMSF033K01Sequence656003759 (8)ref|XP_009619497.1|1e-102PREDICTED: mannan endo-1,4-beta-mannosidase 7-like [Nicotiana tomentosiformis]759005543 (7)ref|XP_009762330.1|4e-58PREDICTED: mannan endo-1,4-beta-mannosidase 7-like [Nicotiana sylvestris]
JMSF051C11Sequence686003759 (8)ref|XP_009619497.1|1e-112PREDICTED: mannan endo-1,4-beta-mannosidase 7-like [Nicotiana tomentosiformis]744005543 (7)ref|XP_009762330.1|1e-73PREDICTED: mannan endo-1,4-beta-mannosidase 7-like [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF051C11+ TCTCAATGCAT
                      ____________________________________________________________
consensus TCTCAATGCAT
 
. : . : . : . : . : . :
rJMSF051C11+ TCAACATAGGAACAGACTTCATTGCAAACAATCAAATCCCCACCATCGATTTCGCCACCA
                      ____________________________________________________________
consensus TCAACATAGGAACAGACTTCATTGCAAACAATCAAATCCCCACCATCGATTTCGCCACCA
 
. : . : . : . : . : . :
rJMSF051C11+ CCCACTCCTATCCCGATCAATGGATGTCCAGCTCAGATGACCAAAGCCAGCTAGCTTTCC
rJMSF002K04+ TATCCCGATCAATGGATGTCCAGCTCAGATGACCAAAGCCAGCTAGCTTTCC
rJMSF033K01+ TATCCCGATCAATGGATGTCCAGCTCAGATGACCAAAGCCAGCTAGCTTTCC
rJMSF028K09+ GATGTCCAGCTCAGATGACCAAAGCCAGCTAGCTTTCC
                      ____________________________________________________________
consensus CCCACTCCTATCCCGATCAATGGATGTCCAGCTCAGATGACCAAAGCCAGCTAGCTTTCC
 
. : . : . : . : . : . :
rJMSF051C11+ TGAGAAACTGGCTGAATGCCCACATCGAAGACTCTCAGTACATTCTCAAGAAGCCATTGC
rJMSF002K04+ TGAGAAACTGGCTGAATGCCCACATCGAAGACTCTCAGTACATTCTCAAGAAGCCATTGC
rJMSF033K01+ TGAGAAACTGGCTGAATGCCCACATCGAAGACTCTCAGTACATTCTCAAGAAGCCATTGC
rJMSF028K09+ TGAGGAACTGGCTGAATGCCCACATCGAAGACTCTCAGTACATTCTCAAGAAGCCATTGC
rJMFF032I18+ AAGAAGCCATTGC
                      ____________________________________________________________
consensus TGAGAAACTGGCTGAATGCCCACATCGAAGACTCTCAGTACATTCTCAAGAAGCCATTGC
 
. : . : . : . : . : . :
rJMSF051C11+ TAATTGCAGAGTTTGGGAAATCCTGGAAAGACCCAGGCTTTAACCCAACCCAGAGGGACG
rJMFF015E21+ ATTGCAGAGTTTGGGAAATCCTGGAAAGACCCAGGCTTTAACCCAACCCAGAGGGACG
rJMSF002K04+ TAATTGCAGAGTTTGGGAAATCCTGGAAAGACCCAGGCTTTAACCCAACCCAGAGGGACG
rJMSF033K01+ TAATTGCAGAGTTTGGGAAATCCTGGAAAGACCCAGGCTTTAACCCAACCCAGAGGGACG
rJMSF028K09+ TAATTGCAGAGTTTGGGAAATCCTGGAAAGACCCAGGCTTTAACCCAACCCAGAGGGACG
rJMFF032I18+ TAATTGCAGAGTTTGGGAAATCCTGGAAAGACCCAGGCTTTAACCCAACCCAGAGGGACG
                      ____________________________________________________________
consensus TAATTGCAGAGTTTGGGAAATCCTGGAAAGACCCAGGCTTTAACCCAACCCAGAGGGACG
 
. : . : . : . : . : . :
rJMSF051C11+ CTCTCTACAGAACTGTATACTACACCATATACTCGTCGGCAAAGCGCGGCGGCGCAGCCG
rJMFF015E21+ CTCTNTACAGAACTGTATACTACACCATATACTCGTCGGCAAAGCGCGGCGGCGCAGCCG
rJMSF002K04+ CTCTCTACAGAACTGTATACTACACCATATACTCGTCGGCAAAGCGCGGCGGCGCAGCCG
rJMSF033K01+ CTCTCTACAGAACTGTATACTACACCATATACTCGTCGGCAAAGCGCGGCGGCGCAGCCG
rJMSF028K09+ CTCTCTACAGAACTGTATACTACACCATATACTCGTCGGCAAAGCGCGGCGGCGCAGCCG
rJMFF032I18+ CTCTNTACAGAACTGTATACTACACCATATACTCGTCGGCAAAGCGCGGCGGCGCAGCCG
                      ____________________________________________________________
consensus CTCTCTACAGAACTGTATACTACACCATATACTCGTCGGCAAAGCGCGGCGGCGCAGCCG
 
. : . : . : . : . : . :
rJMSF051C11+ CCGGAGGCCTTTTCTGGCAACTGTTAACCGACGGAATGGACAACTTCCGGGATGGGTATG
rJMFF015E21+ CCGGAGGCCTTTTCTGGCAACTGTTAACCGACGGAATAGACAACTTCCGGGATGGGTATG
rJMSF002K04+ CCGGAGGCCTTTTCTGGCAACTGTTAACCGACGGAATGGACAACTTCCGGGATGGGTATG
rJMSF033K01+ CCGGAGGCCTTTTCTGGCAACTGTTAACCGACGGAATGGACAACTTCCGGGATGGGTATG
rJMSF028K09+ CCGGAGGCCTTTTCTGGCAACTGTTAACCGACGGAATGGACAACTTCCGGGATGGGTATG
rJMFF032I18+ CCGGAGGCCTTTTCTGGCAACTGTTAACCGACGGAATGGACAACTTCCGGGATGGGTATG
                      ____________________________________________________________
consensus CCGGAGGCCTTTTCTGGCAACTGTTAACCGACGGAATGGACAACTTCCGGGATGGGTATG
 
. : . : . : . : . : . :
rJMSF051C11+ AGATATTGCTAAGCCAGAGGACTTCCACTGCAAATTTGATTTCTCAGCAGTGCCACAAGC
rJMFF015E21+ AGATATTGCTAAGCCAGAGGACTTCCACTGCAAATTTGATTTCTCAGCAGTGCCACAAGC
rJMSF002K04+ AGATATTGCTAAGCCAGAGGACTTCCACTGCAAATTTGATTTCTCAGCAGTGCCACAAGC
rJMSF033K01+ AGATATTGCTAAGCCAGAGGACTTCCACTGCAAATTTGATTTCTCAGCAGTGCCACAAGC
rJMSF028K09+ AGATATTGCTAAGCCAGAGGACTTCCACTGCAAATTTGATTTCTCAGCAGTGCCACAAGC
rJMFF032I18+ AGATATTGCTAAGCCAGAGGACTTCCACTGCAAATTTGATTTCTCAGCAGTGCCACAAGC
                      ____________________________________________________________
consensus AGATATTGCTAAGCCAGAGGACTTCCACTGCAAATTTGATTTCTCAGCAGTGCCACAAGC
 
. : . : . : . : . : . :
rJMSF051C11+ TTTCCCAGATCAGGAGAATATTTGCCAGGATGAAAAACCTTGGTAGGCTGAGAAGAGCCA
rJMFF015E21+ TTTCCCAGATCAGGAGAATATTTGCCAGGATGAAAAACCTTGGTAGGCTGAGAAGAGCCA
rJMSF002K04+ TTTCCCAGATCAGGAGAATATTTGCCAGGATGAAAAACCTTGGTAGGCTGAGAAGAGCCA
rJMSF033K01+ TTTCCCAGATCAGGAGAATATTTGCCAGGATGAAAAACCTTGGTAGGCTGAGAAGAGCCA
rJMSF028K09+ TTTCCCAGATCAGGAGAATATTTGCCAGGATGAAAAACCTTGGTAGGCTGAGAAGAGCCA
rJMFF032I18+ TTTCCCAGATCAGGAGAATATTTGCCAGGANGAAAAACCTTGGTAGGCTGAGAAGAGCCA
                      ____________________________________________________________
consensus TTTCCCAGATCAGGAGAATATTTGCCAGGATGAAAAACCTTGGTAGGCTGAGAAGAGCCA
 
. : . : . : . : . : . :
rJMSF051C11+ AAGCTAATAGGGGGAAGCAAATTGGGAACTGATAGATACAACACGTTTGGTTCACAGAAT
rJMFF015E21+ AAGCTAATAGGGGGAAGCAAATTGGGAACTGATAGATACAACACGTTTGGTTCACAGAAT
rJMSF002K04+ AAGCTAATAGGGGGAAGCAAATTGGGAACTGATAGATACAACACGTTTGGTTCACAGAAT
rJMSF033K01+ AAGCTAATAGGGGGAAGCAAATTGGGAACTGATAGATACAACACGTTTGGTTCACAGAAT
rJMSF028K09+ AAGCTAATAGGGGGAAGCAAATTGGGAACTGATAGATACAACACGTTTGGTTCACAGAAT
rJMFF032I18+ AAGCTAATAGGGGGAAGCAAATTGGGAACTGATAGATACAACACGTNTGGTTCACAGAAT
                      ____________________________________________________________
consensus AAGCTAATAGGGGGAAGCAAATTGGGAACTGATAGATACAACACGTTTGGTTCACAGAAT
 
. : . : . : . : . : . :
rJMSF051C11+ GATACAGTATTTCGGTATAAGTTATTACTAATTTATTCTCGGAAATACTATTCCCGAGAA
rJMFF015E21+ GATACAGTATTTCGGTATAAGTTATTACTAATTTATTCTCGGAAATACTATTCCCGAGAA
rJMSF002K04+ GATACAGTATTTCGGTATAAGTTATTACTAATTTATTCTCGGAAATACTATTCCCGAGAA
rJMSF033K01+ GATACAGTATTTCGGTATAAGTTATTACTAATTTATTCTCGGAAATACTATTCCCGAGAA
rJMSF028K09+ GATACAGTATTTCGGTATAAGTTATTACTAATTTATTCTCGGAAATACTATTCCCGAGAA
rJMFF032I18+ GATACAGTANTTCGGTATAAGTTATTACTAATTTATTCTCGGAAATACTATTCCCGAGAA
                      ____________________________________________________________
consensus GATACAGTATTTCGGTATAAGTTATTACTAATTTATTCTCGGAAATACTATTCCCGAGAA
 
. : . : . : . : . : . :
rJMSF051C11+ TAAGATAATTACTAGATTAATATAGTGTGTTTACTGGTGAGAGAATTTGTGGGAGTGAAT
rJMFF015E21+ TAAGATAATTACTAGATTAATATAGTGTGTTTACTGGTGAGAGAATTTGTGGGAGTGAAT
rJMSF002K04+ TAAGATAATTACTAGATTAATATAGTGTGTTTACTGGTGAGAGAATTTGTGGGAGTGAAT
rJMSF033K01+ TAAGATAATTACTAGATTAATATAGTGTGTTTACTGGTGAGAGAATTTGTGGGAGTGAAT
rJMSF028K09+ TAAGATAATTACTAGATTAATATAGTGTGTTTACTGGTGAGAGAATTTGTGGGAGTGAAT
rJMFF032I18+ TAAGATAATTACTAGATTAATATAGTGTGTTTACTGGTGAGAGAATTTGTGGGAGTGAAT
rJMFF047M16+ TTAATATAGTGTGTTTACTGGTGAGAGAATTTGTGGGAGTGAAT
                      ____________________________________________________________
consensus TAAGATAATTACTAGATTAATATAGTGTGTTTACTGGTGAGAGAATTTGTGGGAGTGAAT
 
. : . : . : . : . : . :
rJMSF051C11+ TTTCTCTCTTAGAGATGAATGTTGGAATGGGGTTCATCCAGGAGGGGAATAGTAGGATTA
rJMFF015E21+ TTTCTCTCTTAGAGATGAATGTTGGAATGGGGTTCATCCAGGAGGGGAATAGTAGGATTA
rJMSF002K04+ TTTCTCTCTTAGAGATGAATGTTGGAATGGGGTTCATCCAGGAGGGGAATAGTAGGATTA
rJMSF033K01+ TTTCTCTCTTAGAGATGAATGTTGGAATGGGGTTCATCCAGGAGGGGAATAGTAGGATTA
rJMSF028K09+ TTTCTCTCTTAGAGATGAATGTTGGAATGGGGTTCATCCAGGAGGGGAATAGTAGGATTA
rJMFF032I18+ TTTCTCTNTTAGAGATGAATGTTGGAATGGGGTTCATCCAGGAGGGGAATAGTAGGATTA
rJMFF047M16+ TTTCTCTCTTAGAGATGAATGTTGGAATGGGGTTCATCCAGGAGGGGAATAGTAGGATTA
                      ____________________________________________________________
consensus TTTCTCTCTTAGAGATGAATGTTGGAATGGGGTTCATCCAGGAGGGGAATAGTAGGATTA
 
. : . : . : . : . : . :
rJMSF051C11+ GCAGAGACTCGTG
rJMFF015E21+ GCAGAGACTCGTG
rJMSF002K04+ GCAGAGACTCGTGTTTTTCTGAATCCTAAATCCATATAATTACTAGACTAAGAATGTTTT
rJMSF033K01+ GCAGAGACTCGTGTTTTTCTGAATCCTAAATCCATATAATTACTAGACTAAGAATGTTTT
rJMSF028K09+ GCAGAGACTCGTGTTTTTCTGAATCCTAAATCCATATAATTACTAGACTAAGAATGTTTT
rJMFF032I18+ GCAGAGACTCGTGTTTTTCTGAATCCTAAATCCATATAATTACTAGACTAAGAATGTTTT
rJMFF047M16+ GCAGAGACTCGTGTTTTTCTGAATCCTAAATCCATATAATTACTAGACTAAGAATGTTTT
                      ____________________________________________________________
consensus GCAGAGACTCGTGTTTTTCTGAATCCTAAATCCATATAATTACTAGACTAAGAATGTTTT
 
. : . : . : . : . : . :
rJMSF002K04+ T
rJMSF033K01+ TTAATGTGTGGTAATACTAATTAATGGGGGAAGCCT
rJMSF028K09+ TTAATGTGTGGTAATACTAATTAATGGGGGAAGCCTCTGAGTTTATGTATGTTATGTCAT
rJMFF032I18+ TTAATGTGTGGTAATACTAATTAATGGGGGAAGCCTNTGAGTTTATGTATGTTATGTCAT
rJMFF047M16+ TTAATGTGTGGTAATACTAATTAATGGGGGAAGCCTCTGAGTTTATGTATGTTATGTCAT
                      ____________________________________________________________
consensus TTAATGTGTGGTAATACTAATTAATGGGGGAAGCCTCTGAGTTTATGTATGTTATGTCAT
 
. : . : . : . : . : . :
rJMSF028K09+ ATATGTAAC
rJMFF032I18+ ATANGTAACTGTGGCAGTTCAATGCAATTCAAAGCATATCAG
rJMFF047M16+ ATATGTAACTGTGGCAGTTGAATGCAATTCAAAGCATATCAGTTTTATTTTATTCXXXXX
                      ____________________________________________________________
consensus ATATGTAACTGTGGCAGTTGAATGCAATTCAAAGCATATCAGTTTTATTTTATTCNNNNN
 
. : . : . : . : . : . :
rJMFF047M16+ XXXXXXXXXXXXXXXXXXTAAAAAAAAAAAAAAAACTCTCCAGGTTGATCCGCCATAAGG
                      ____________________________________________________________
consensus NNNNNNNNNNNNNNNNNNTAAAAAAAAAAAAAAAACTCTCCAGGTTGATCCGCCATAAGG