| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF007F08 | Sequence | 520 | 012039 (8) | gb|EYU45142.1| | 4e-77 | hypothetical protein MIMGU_mgv1a003701mg [Erythranthe guttata] | 735 | 005542 (9) | ref|XP_009775388.1| | 2e-112 | PREDICTED: glucose-6-phosphate isomerase, cytosolic isoform X1 [Nicotiana sylve |
| JMFF032F05 | Sequence | 571 | 012039 (8) | ref|XP_011083695.1| | 3e-93 | PREDICTED: glucose-6-phosphate isomerase, cytosolic [Sesamum indicum] ref|XP_01 | 760 | 005542 (9) | ref|XP_009775389.1| | 7e-122 | PREDICTED: glucose-6-phosphate isomerase, cytosolic isoform X2 [Nicotiana sylve |
| JMFF047L17 | Sequence | 648 | 012039 (8) | ref|XP_009775388.1| | 3e-110 | PREDICTED: glucose-6-phosphate isomerase, cytosolic isoform X1 [Nicotiana sylve | 602 | 005542 (9) | ref|XP_009775389.1| | 3e-74 | PREDICTED: glucose-6-phosphate isomerase, cytosolic isoform X2 [Nicotiana sylve |
| JMSF005E21 | Sequence | 391 | 012039 (8) | ref|XP_008783474.1| | 2e-51 | PREDICTED: glucose-6-phosphate isomerase, cytosolic [Phoenix dactylifera] ref|X | 199 | 005542 (9) | gb|ABB17077.1| | 5e-13 | glucose-6-phosphate isomerase [Nicotiana langsdorffii x Nicotiana sanderae] |
| JMSF005E23 | Sequence | 425 | 005542 (9) | ref|XP_009775389.1| | 2e-46 | PREDICTED: glucose-6-phosphate isomerase, cytosolic isoform X2 [Nicotiana sylve | |||||
| JMSF024L11 | Sequence | 670 | 012039 (8) | ref|XP_009775389.1| | 1e-116 | PREDICTED: glucose-6-phosphate isomerase, cytosolic isoform X2 [Nicotiana sylve | 769 | 005542 (9) | ref|XP_009775388.1| | 3e-130 | PREDICTED: glucose-6-phosphate isomerase, cytosolic isoform X1 [Nicotiana sylve |
| JMSF027A13 | Sequence | 639 | 012039 (8) | ref|XP_009775388.1| | 1e-104 | PREDICTED: glucose-6-phosphate isomerase, cytosolic isoform X1 [Nicotiana sylve | 709 | 005542 (9) | ref|XP_009775388.1| | 8e-126 | PREDICTED: glucose-6-phosphate isomerase, cytosolic isoform X1 [Nicotiana sylve |
| JMSF045K08 | Sequence | 710 | 012039 (8) | ref|XP_009775388.1| | 4e-126 | PREDICTED: glucose-6-phosphate isomerase, cytosolic isoform X1 [Nicotiana sylve | 705 | 005542 (9) | ref|XP_007221807.1| | 2e-115 | hypothetical protein PRUPE_ppa003512mg [Prunus persica] gb|EMJ23006.1| hypotheti |
| JMSF045N08 | Sequence | 722 | 012039 (8) | ref|XP_009775388.1| | 1e-124 | PREDICTED: glucose-6-phosphate isomerase, cytosolic isoform X1 [Nicotiana sylve | 746 | 005542 (9) | ref|XP_009775389.1| | 5e-118 | PREDICTED: glucose-6-phosphate isomerase, cytosolic isoform X2 [Nicotiana sylve |
This contig is upended
. : . : . : . : . : . :
rJMSF045N08+ TATGAGACTGG
rJMSF027A13+ TATGAGACTGG
rJMSF024L11+ ATTGATGGTGTACCTCTGCCTTATGAGACTGG
____________________________________________________________
consensus ATTGATGGTGTACCTCTGCCTTATGAGACTGG
. : . : . : . : . : . :
rJMSF045N08+ TGAAATTGANTTTNGGGGAACCTGGGACAAATGGCCAACACAGCTTTTACCAATTAATTC
rJMSF027A13+ TGAAATTGATTTT-GGGGAACCTGGGACAAATGGCCAACACAGCTTTTACCAATTAATTC
rJMSF024L11+ TGAAATTGATTTT-GGGGAACCTGGGACAAATGGCCAACACAGCTTTTACCAATTAATTC
rJMFF007F08+ CCAACACAGCTTTTACCAATTAATTC
rJMSF045K08+ CTGGGACAAATGGCCAACACAGCTTTTACCAATTAATTC
rJMFF032F05+ GGGGAACCTGGGACAAATGGCCAACACAGCTTTTACCAATTAATTC
____________________________________________________________
consensus TGAAATTGATTTT-GGGGAACCTGGGACAAATGGCCAACACAGCTTTTACCAATTAATTC
. : . : . : . : . : . :
rJMSF045N08+ ACCAGGGTCGTGTTATTCCTTGTGATTTTATTGGTGTTGTGAAGAGTCAGCAACCTGTAT
rJMSF027A13+ ACCAGGGTCGTGTTATTCCTTGTGATTTTATTGGTGTTGTGAAGAGTCAGCAACCTGTAT
rJMSF024L11+ ACCAGGGTCGTGTTATTCCTTGTGATTTTATTGGTGTTGTGAAGAGTCAGCAACCTGTAT
rJMFF007F08+ ACCAGGGTCGTGTTATTCCTTGTGATTTTATTGGTGTTGTGAAGAGTCAGCAACCTGTAT
rJMSF045K08+ ACCAGGGTCGTGTTATTCCTTGTGATTTTATTGGTGTTGTGAAGAGTCAGCAACCTGTAT
rJMFF032F05+ ACCAGGGTCGTGTTATTCCTTGTGATTTTATTGGTGTTGTGAAGAGTCAGCAACCTGTAT
____________________________________________________________
consensus ACCAGGGTCGTGTTATTCCTTGTGATTTTATTGGTGTTGTGAAGAGTCAGCAACCTGTAT
. : . : . : . : . : . :
rJMSF045N08+ ACTTAAAAGGTGAAGTGGTGAGTAACCATGATGAGCTCATGTCGAACTTCTTTGCACAGC
rJMSF027A13+ ACTTAAAAGGTGAAGTGGTGAGTAACCATGATGAGCTCATGTCGAACTTCTTTGCACAGC
rJMSF024L11+ ACTTAAAAGGTGAAGTGGTGAGTAACCATGATGAGCTCATGTCGAACTTCTTTGCACAGC
rJMFF007F08+ ACTTAAAAGGTGAAGTGGTGAGTAACCATGATGAGCTCATGTCGAACTTCTTTGCACAGC
rJMSF045K08+ ACTTAAAAGGTGAAGTGGTGAGTAACCATGATGAGCTCATGTCGAACTTCTTTGCACAGC
rJMFF032F05+ ACTTAAAAGGTGAAGTGGTGAGTAACCATGATGAGCTCATGTCGAACTTCTTTGCACAGC
rJMFF047L17+ AGC
____________________________________________________________
consensus ACTTAAAAGGTGAAGTGGTGAGTAACCATGATGAGCTCATGTCGAACTTCTTTGCACAGC
. : . : . : . : . : . :
rJMSF045N08+ CAGATGCCCTAGCTTATGGGAAGACCCAAGAAGAGTTGCAGAAGGAGAATGTTCCACAAC
rJMSF027A13+ CAGATGCCCTAGCTTATGGGAAGACCCAAGAAGAGTTGCAGAAGGAGAATGTTCCACAAC
rJMSF024L11+ CAGATGCCCTAGCTTATGGGAAGACCCAAGAAGAGTTGCAGAAGGAGAATGTTCCACAAC
rJMFF007F08+ CAGATGCCCTAGCTTATGGGAAGACCCAAGAAGAGTTGCAGAAGGAGAATGTTCCACAAC
rJMSF045K08+ CAGATGCCCTAGCTTATGGGAAGACCCAAGAAGAGTTGCAGAAGGAGAATGTTCCACAAC
rJMFF032F05+ CAGATGCCCTAGCTTATGGGAAGACCCAAGAAGAGTTGCAGAAGGAGAATGTTCCACAAC
rJMFF047L17+ CAGATGCCCTAGCTTATGGGAAGACCCAAGAAGAGTTGCAGAAGGAGAATGTTCCACAAC
____________________________________________________________
consensus CAGATGCCCTAGCTTATGGGAAGACCCAAGAAGAGTTGCAGAAGGAGAATGTTCCACAAC
. : . : . : . : . : . :
rJMSF045N08+ ATCTTGTTTCTCACAAGACTTTTTCAGGCAACAGACCTTCGCTAAGCATACTCCTTCCAT
rJMSF027A13+ ATCTTGTTTCTCACAAGACTTTTTCAGGCAACAGACCTTCGCTAAGCATACTCCTTCCAT
rJMSF024L11+ ATCTTGTTTCTCACAAGACTTTTTCAGGCAACAGACCTTCGCTAAGCATACTCCTTCCAT
rJMSF005E23+ AAGCATACTCCTTCCAT
rJMFF007F08+ ATCTTGTTTCTCACAAGACTTTTTCAGGCAACAGACCTTCGCTAAGCATACTCCTTCCAT
rJMSF045K08+ ATCTTGTTTCTCACAAGACTTTTTCAGGCAACAGACCTTCGCTAAGCATACTCCTTCCAT
rJMFF032F05+ ATCTTGTTTCTCACAAGACTTTTTCAGGCAACAGACCTTCGCTAAGCATACTCCTTCCAT
rJMFF047L17+ ATCTTGTTTCTCACAAGACTTTTTCAGGCAACAGACCTTCGCTAAGCATACTCCTTCCAT
____________________________________________________________
consensus ATCTTGTTTCTCACAAGACTTTTTCAGGCAACAGACCTTCGCTAAGCATACTCCTTCCAT
. : . : . : . : . : . :
rJMSF045N08+ CTCTTAATGCTTATAATATTGGACAGTTGTTGGCAATCTATGAACATAGGGTTGCTGTGC
rJMSF027A13+ CTCTTAATGCTTATAATATTGGACAGTTGTTGGCAATCTATGAACATAGGGTTGCTGTGC
rJMSF024L11+ CTCTTAATGCTTATAATATTGGACAGTTGTTGGCAATCTATGAACATAGGGTTGCTGTGC
rJMSF005E23+ CTCTTAATGCTTATAATATNGGACAGTTGTTGGCAATCTANGAACATAGGGTTGCTGTGC
rJMFF007F08+ CTCTTAATGCTTATAATATTGGACAGTTGTTGGCAATCTATGAACATAGGGTTGCTGTGC
rJMSF045K08+ CTCTTAATGCTTATAATATTGGACAGTTGTTGGCAATCTATGAACATAGGGTTGCTGTGC
rJMFF032F05+ CTCTTAATGCTTATAATATTGGACAGTTGTTGGCAATCTATGAACATAGGGTTGCTGTGC
rJMFF047L17+ CTCTTAATGCTTATAATATTGGACAGTTGTTGGCAATCTATGAACATAGGGTTGCTGTGC
____________________________________________________________
consensus CTCTTAATGCTTATAATATTGGACAGTTGTTGGCAATCTATGAACATAGGGTTGCTGTGC
. : . : . : . : . : . :
rJMSF045N08+ AAGGGTTTATATGGGGTATCAACTCTTTTGATCAATGGGGTGTGGAGCTAGGAAAGTCAT
rJMSF027A13+ AAGGGTTTATATGGGGTATCAACTCTTTTGATCAATGGGGTGTGGAGCTAGGAAAGTCAT
rJMSF024L11+ AAGGGTTTATATGGGGTATCAACTCTTTTGATCAATGGGGTGTGGAGCTAGGAAAGTCAT
rJMSF005E23+ AAGGGTTTATATGGGGTATCAACTCTTTTGATCAATGGGGTGTGGAGCTAGGAAAGTCAT
rJMFF007F08+ AAGGGTTTATATGGGGTATCAACTCTTTTGATCAATGGGGTGTGGAGCTAGGAAAGTCAT
rJMSF045K08+ AAGGGTTTATATGGGGTATCAACTCTTTTGATCAATGGGGTGTGGAGCTAGGAAAGTCAT
rJMFF032F05+ AAGGGTTTATATGGGGTATCAACTCTTTTGATCAATGGGGTGTGGAGCTAGGAAAGTCAT
rJMFF047L17+ AAGGGTTTATATGGGGTATCAACTCTTTTGATCAATGGGGTGTGGAGCTAGGAAAGTCAT
____________________________________________________________
consensus AAGGGTTTATATGGGGTATCAACTCTTTTGATCAATGGGGTGTGGAGCTAGGAAAGTCAT
. : . : . : . : . : . :
rJMSF045N08+ TAGCTACACAAGTAAGAAAGCAACTCAATGCATCCCGGAAGAAGGGAGAATCAATTGAAG
rJMSF027A13+ TAGCTACACAAGTAAGAAAGCAACTCAATGCATCCCGGAAGAAGGGAGAATCAATTGAAG
rJMSF024L11+ TAGCTACACAAGTAAGAAAGCAACTCAATGCATCCCGGAAGAAGGGAGAATCAATTGAAG
rJMSF005E23+ CAGCTACACAAGTAAGAAAGCAACTCNATGCATCCCGGAAGAAGGGAGAATCAATTGAAG
rJMSF005E21+ GAAAGCAACTCAATGCATCCCGGAAGAAGGGNGAATCAATTGNAG
rJMFF007F08+ TAGCTACACAAGTAAGAAAGCAACTCAATGCATCCCGGAAGAAGGGAGAATCAATTGAAG
rJMSF045K08+ TAGCTACACAAGTAAGAAAGCAACTCAATGCATCCCGGAAGAAGGGAGAATCAATTGAAG
rJMFF032F05+ TAGCTACACAAGTAAGAAAGCAACTCAATGCATCCCGGAAGAAGGGAGAATCAATTGAAG
rJMFF047L17+ TAGCTACACAAGTAAGAAAGCAACTCAATGCATCCCGGAAGAAGGGAGAATCAATTGAAG
____________________________________________________________
consensus TAGCTACACAAGTAAGAAAGCAACTCAATGCATCCCGGAAGAAGGGAGAATCAATTGAAG
. : . : . : . : . : . :
rJMSF045N08+ GATTCAATTTCAGCACCAAAACATTGTTATCAAAATATTTAGAGGCGAGCTCCGATATTC
rJMSF027A13+ GATTCAATTTCAGCACCAAAACATTGTTATCAAAATATTTAGAGGCGAGCTCCGATATTC
rJMSF024L11+ GATTCAATTTCAGCACCAAAACATTGTTATCAAAATATTTAGAGGCGAGCTCCGATATTC
rJMSF005E23+ GATNCAATTTCAGCACCAAAACATTGTTATCAAANTATTTAGAGGCGAGCTCCGATATTC
rJMSF005E21+ GANTCAANTTCAGCACCAAAACATTGTTATCAAAATATNTAGAGGCGAGCTCCGATATTC
rJMFF007F08+ GATTCAATTTCAGCACCAAAACATTGTTATCAAAATATTTAGAGGCGAGCTCCGATATTC
rJMSF045K08+ GATTCAATTTCAGCACCAAAACATTGTTATCAAAATATTTAGAGGCGAGCTCCGATATTC
rJMFF032F05+ GATTCAATTTCAGCACCAAAACATTGTTATCAAAATATTTAGAGGCGAGCTCCGATATTC
rJMFF047L17+ GATTCAATTTCAGCACCAAAACATTGTTATCAAAATATTTAGAGGCGAGCTCCGATATTC
____________________________________________________________
consensus GATTCAATTTCAGCACCAAAACATTGTTATCAAAATATTTAGAGGCGAGCTCCGATATTC
. : . : . : . : . : . :
rJMSF045N08+ CTGCTGATCCTCCTACTGCTCTACCCAAGATTTAACTGCTTAAAAGTTGATGCAAATATC
rJMSF027A13+ CTGCTGATCCTCCTACTGCTCTACCCAAGATTTAACTGCTTAAAAGTTGATGCAAATATC
rJMSF024L11+ CTGCTGATCCTCCTACTGCTCTACCCAAGATTTAACTGCTTAAAAGTTGATGCAAATATC
rJMSF005E23+ CTGNTGATCCTCCTACTGCTCTACCCAAGATTTAACTGCTTAAAAGNTGATGCAAATATC
rJMSF005E21+ CTGCTGATCCTCCTACTGCTCTACCCAAGATTTNACTGCTTAAAAGTNGATGCAAATATC
rJMFF007F08+ CTGCTGATCCTCCTACTGCTCTACCCAAGATTTAACTGCTTAAAAGTTGATGCAAATATC
rJMSF045K08+ CTGCTGATCTTCCTACTGCTCTACCCAAGATTTAACTGCTTAAAAGTTGATGCAAATATC
rJMFF032F05+ CTGCTGATCCTCCTACTGCTCTACCCAAGATTTAACTGCTTAAAAGTTGATGCAAATATC
rJMFF047L17+ CTGCTGATCCTCCTACTGCTCTACCCAAGATTTAACTGCTTAAAAGTTGATGCAAATATC
____________________________________________________________
consensus CTGCTGATCCTCCTACTGCTCTACCCAAGATTTAACTGCTTAAAAGTTGATGCAAATATC
. : . : . : . : . : . :
rJMSF045N08+ AGACCTTTGAGTTTATGGTTCTGTTGAGTTGCATATTGGAGCGAGCATAAAGGAAC-TTT
rJMSF027A13+ AGACCTTTGAGTTTATGGTTCTGTTGAGTTGCATATTGGAGCGAGCATAAAGGAAC-TTT
rJMSF024L11+ AGACCTTTGAGTTTATGGTTCTGTTGAGTTGCATATTGGAGCGAGCATAAAGGAAC-TTT
rJMSF005E23+ AGACCTCAGAGNTTATGGCTCTGTTGAGTTGCATATTGGAGCGAGCATAAAGGAACAATA
rJMSF005E21+ A
rJMFF007F08+ AGACCTTTGAGTTTATGGTTCTGTTGAGTTGCATATTGGAGCGAGCATAAAGGAAC-TTT
rJMSF045K08+ AGACCTTTGAGTTTATGGTTCTGTTGAGTTGCATATTGGAGCGAGCATAAAGGAAC-TTT
rJMFF032F05+ AGACCTTTGAGTTTATGGTTCTGTTGAGTTGCATATTGGAGCGAGCATAAAGGAAC-TTT
rJMFF047L17+ AGACCTTTGAGTTTATGGTTCTGTTGAGTTGCATATTGGAGCGAGCATAAAGGAAC-TTT
____________________________________________________________
consensus AGACCTTTGAGTTTATGGTTCTGTTGAGTTGCATATTGGAGCGAGCATAAAGGAAC-TTT
. : . : . : . : . : . :
rJMSF045N08+ TGCTGTTTTTTGGGGTTTTTATTGCTATCCGCATTTTTGTTTTGTTTTCTGCAACACTTG
rJMSF027A13+ TGCTGTTTTTTGGGGTTTTTATTGCTATCCGCATTTT
rJMSF024L11+ TGCTGTTTTTTGGGGTTTTTATTGCTATCCGCATTTTTGTTTTGTTTTCTGCAACACTTG
rJMSF005E23+ AGCTGTTTTGTGGGGNTTTTATTGCTATCCGCATTTATGTTTTGT
rJMFF007F08+ TGCTGTTTTTTGGGGTTTTTATTGCTATCCGCATTTTTGTTTTGTTTTCTGCAACACTTG
rJMSF045K08+ TGCTGTTTTTTGGGGTTTTTATTGCTATCCGCATTTTTGTTTTGTTTTCTGCAA
rJMFF032F05+ TGCTGTTTTTTGGGGTTTTTATTGCTATCCGCATTTTTGTTTTGTTTTCTGCAACACTTG
rJMFF047L17+ TGCTGTTTTTTGGGGTTTTTATTGCTATCCGCATTTTTGTTTTGTTTTCTGCAACACTTG
____________________________________________________________
consensus TGCTGTTTTTTGGGGTTTTTATTGCTATCCGCATTTTTGTTTTGTTTTCTGCAACACTTG
. : . : . : . : . : . :
rJMSF045N08+ AAAATC
rJMSF024L11+ AAAATCAACGAC
rJMFF007F08+ AAAATCAACGACGTTGATTATCTCAATCAATAAAGCTT
rJMFF032F05+ AAAATCAACGACGTTGATTATCTCAATCAATAAAGCTT
rJMFF047L17+ AAAATCAACGACGTTGATTATCTCAATCAATAAAGCTTGATTGCCATTGCCATTTATGAC
____________________________________________________________
consensus AAAATCAACGACGTTGATTATCTCAATCAATAAAGCTTGATTGCCATTGCCATTTATGAC