Contig 005540:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF047J20Sequence632007481 (2)gb|EPS70866.1|8e-25hypothetical protein M569_03894, partial [Genlisea aurea]539005540 (2)emb|CDP04561.1|2e-14unnamed protein product [Coffea canephora]
JMSF020D03Sequence631007481 (2)ref|XP_010647089.1|293PREDICTED: uncharacterized protein LOC100242843 [Vitis vinifera]724005540 (2)emb|CDP04561.1|9e-33unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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rJMSF020D03+                                    GCCTACTGGCATTTCAGCCCCCCAATCTGTCAGT
                      ____________________________________________________________
consensus                                       GCCTACTGGCATTTCAGCCCCCCAATCTGTCAGT
 
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rJMSF020D03+          GATCTTCTGTCTGATATTGCCCCAATAGCCAGCGTAATTGATCCATTGGTAATTGAAGAA
                      ____________________________________________________________
consensus             GATCTTCTGTCTGATATTGCCCCAATAGCCAGCGTAATTGATCCATTGGTAATTGAAGAA
 
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rJMSF020D03+          GATATACTTGATGGAGATGACCCACCCAGCAGACGACAAGGCTAGTAGTCAGAACGAGGA
                      ____________________________________________________________
consensus             GATATACTTGATGGAGATGACCCACCCAGCAGACGACAAGGCTAGTAGTCAGAACGAGGA
 
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rJMSF020D03+          TTGTTGCTCCTACACAAGCTCAAATAGAGAGAGTTGGGGAAGATGCTCATCTCTTGGAAG
                      ____________________________________________________________
consensus             TTGTTGCTCCTACACAAGCTCAAATAGAGAGAGTTGGGGAAGATGCTCATCTCTTGGAAG
 
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rJMSF020D03+          TGATAATGAGCGTTGCTCAGACAATGCATGTGTTATTAACGACCATCAGACGCCATTGGA
rJMFF047J20+           GATAATGAGCGTTGCTCAGACAATGCATGTGTTATTAACGACCATCAGACGCCATGNGA
                      ____________________________________________________________
consensus             TGATAATGAGCGTTGCTCAGACAATGCATGTGTTATTAACGACCATCAGACGCCATTGGA
 
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rJMSF020D03+          GATCCTTGCGACGCCTCTTCGGAATATCCAAGAAAGCATATTGGAGTCTTCGAGAGATAA
rJMFF047J20+          GATCCTTGCGACGCCTCTTCGGAATATCCAAGAAAGCATATTGGAGTCTTCGAGAGATAA
                      ____________________________________________________________
consensus             GATCCTTGCGACGCCTCTTCGGAATATCCAAGAAAGCATATTGGAGTCTTCGAGAGATAA
 
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rJMSF020D03+          AAAGAAAAAGAAGAAAGCTGAAACGCCCACAAAGAAATCTAGACGGGAAAAGTTCGAGAA
rJMFF047J20+          AAAGAAAAAGAAGAAAGCTGAAACGCCCACAAAGAAATCTAGACGGGAAAAGTTCGAGAA
                      ____________________________________________________________
consensus             AAAGAAAAAGAAGAAAGCTGAAACGCCCACAAAGAAATCTAGACGGGAAAAGTTCGAGAA
 
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rJMSF020D03+          GCTGGAGGCACTTAGCCAGCGTTTGCGGCTTTGTATTCTGAAGAGAGTTAGCCATAGGAG
rJMFF047J20+          GCTGGAGGCACTTAGCCAGCGTTTGCGGCTTTGTATTCTGAAGAGAGTTAGCCATAGGAG
                      ____________________________________________________________
consensus             GCTGGAGGCACTTAGCCAGCGTTTGCGGCTTTGTATTCTGAAGAGAGTTAGCCATAGGAG
 
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rJMSF020D03+          ACACTGCTCCTCTTGACCACCCGCCTTATGTAATATAGATGTGAAAGGCTTAGATCACAG
rJMFF047J20+          ACACTGCTCCTCTTGACCACCCGCCTTATGTAATATAGATGTGAAAGGCTTAGATCACAG
                      ____________________________________________________________
consensus             ACACTGCTCCTCTTGACCACCCGCCTTATGTAATATAGATGTGAAAGGCTTAGATCACAG
 
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rJMSF020D03+          CACTAATCACGGCATCTGTATTATAAGGTATAGGTTCTTCTCATAACTGTAAACTGTGTA
rJMFF047J20+          CACTAATCACGGCATCTGTATTATAAGGTATAGGTTCTTCTCATAACTGTAAACTGTGTA
                      ____________________________________________________________
consensus             CACTAATCACGGCATCTGTATTATAAGGTATAGGTTCTTCTCATAACTGTAAACTGTGTA
 
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rJMSF020D03+          TGCCCACTTTCCGGTTATTTTTTGTTAGTGTTAATGCCAGCATTCACCTCTTCAATGTAA
rJMFF047J20+          TGCCCACTTTCCGGTTATTTTTTGTTAGTGTTAATGCCAGCATTCACCTCTTCAATGTAA
                      ____________________________________________________________
consensus             TGCCCACTTTCCGGTTATTTTTTGTTAGTGTTAATGCCAGCATTCACCTCTTCAATGTAA
 
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rJMSF020D03+          TCCATGTAGCTCTGATTGCTCTTCTTTATTACTACACTCTTAAGGAAATACAGCTCTTGT
rJMFF047J20+          TCCATGTAGCTCTGATTGCTCTTCTTTATTACTACACTCTTAAGGAAATACAGCTCTTGT
                      ____________________________________________________________
consensus             TCCATGTAGCTCTGATTGCTCTTCTTTATTACTACACTCTTAAGGAAATACAGCTCTTGT
 
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rJMSF020D03+          CTTAACAACATTTCTTTTGGCTTGTAGGAT                              
rJMFF047J20+          CTTAACAACATTTCTTTTGGCTTGTAGGATTGTATTGAATGTTAATGAATATTGTGAAAG
                      ____________________________________________________________
consensus             CTTAACAACATTTCTTTTGGCTTGTAGGATTGTATTGAATGTTAATGAATATTGTGAAAG