Contig 005537:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF047E13Sequence492005537 (2)ref|XP_009589012.1|4e-68PREDICTED: transmembrane protein 97-like [Nicotiana tomentosiformis]492005537 (2)ref|XP_011100301.1|8e-13PREDICTED: transmembrane protein 97-like [Sesamum indicum]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF047E13-                                                ACCGTAAAACGACATGGGAGTTC
                      ____________________________________________________________
consensus                                                  ACCGTAAAACGACATGGGAGTTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF047E13-           TGTTGAAGCTAACAGACTTCGCACTCTTCATCTTCTTCCTCTTGATTGCCCTAGCGGCAC
                      ____________________________________________________________
consensus             TGTTGAAGCTAACAGACTTCGCACTCTTCATCTTCTTCCTCTTGATTGCCCTAGCGGCAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF047E13-           CGCTTTTTGACGGCCAATGCGTTCTTTCGCCAGACCTCTACCCCCCATCCTTGGTGGACC
                      ____________________________________________________________
consensus             CGCTTTTTGACGGCCAATGCGTTCTTTCGCCAGACCTCTACCCCCCATCCTTGGTGGACC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF047E13-           TCAAGGCATGGTACGCTAAAGAATACGGCGACTATTTGGTTTCTGAGAAGCCACATTTCT
                      ____________________________________________________________
consensus             TCAAGGCATGGTACGCTAAAGAATACGGCGACTATTTGGTTTCTGAGAAGCCACATTTCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF047E13-           TTGTTGGGTTGATCTGGCTTGAGCTCCTCTTCGCCTGGCCTCTCTCTATCATCTCTCTCT
                      ____________________________________________________________
consensus             TTGTTGGGTTGATCTGGCTTGAGCTCCTCTTCGCCTGGCCTCTCTCTATCATCTCTCTCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF047E13-           ACGGGATTGCCGCGGGAAAATCCTGGGTTAGCACTACCTGCTTGCTCTATGGGACCTCCA
                      ____________________________________________________________
consensus             ACGGGATTGCCGCGGGAAAATCCTGGGTTAGCACTACCTGCTTGCTCTATGGGACCTCCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF047E13-           CCCTCACTTCCATGGTTGCCATCCTTACAGAACAGACGCTGTCCAAGAGAGCATCAGAGA
rJMFF047E13+                                                          GAGCATCAGAGA
                      ____________________________________________________________
consensus             CCCTCACTTCCATGGTTGCCATCCTTACAGAACAGACGCTGTCCAAGAGAGCATCAGAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF047E13-           AGTTGCTGATGATGTACTACCCATTCTTTGGGTTTGCTGTTTTAGCAATGTTACGTGGTC
rJMFF047E13+          AGTTGCTGATGATGTACTACCCATTCTTTGGGTTTGCTGTTTTAGCAATGTTACGTGGTC
                      ____________________________________________________________
consensus             AGTTGCTGATGATGTACTACCCATTCTTTGGGTTTGCTGTTTTAGCAATGTTACGTGGTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF047E13-           TACTAGCTCATTCTGGCAAGGGCACGTCGATTGGCAAAAGACCTGCATC           
rJMFF047E13+          TACTAGCTCATTCTGGCAAGGGCACGTCGATTGGCAAAAGACCTGCATCAAACAGGAAAA
                      ____________________________________________________________
consensus             TACTAGCTCATTCTGGCAAGGGCACGTCGATTGGCAAAAGACCTGCATCAAACAGGAAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF047E13+          AGAAGGCTTGAATTTCCGAGCTCAGAAGATGACCTAAGAATTTTGCATTCTCTCACATTA
                      ____________________________________________________________
consensus             AGAAGGCTTGAATTTCCGAGCTCAGAAGATGACCTAAGAATTTTGCATTCTCTCACATTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF047E13+          ATTCCTGAAACTCCTCTTTCTGGTTTTGCATTCGTTTTTTCGGTTTATCCGGACTTCAAC
                      ____________________________________________________________
consensus             ATTCCTGAAACTCCTCTTTCTGGTTTTGCATTCGTTTTTTCGGTTTATCCGGACTTCAAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF047E13+          TGATTACCAGCAGCAGATGATTTAGTATGCTTTTGAATTTAAGGCACCAGAATGTGTTTA
                      ____________________________________________________________
consensus             TGATTACCAGCAGCAGATGATTTAGTATGCTTTTGAATTTAAGGCACCAGAATGTGTTTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF047E13+          GTTACTGCTATTAGTATGAAGTTGATACACATAACTTCTTTGTCTTTTGTAGTTCAGTTG
                      ____________________________________________________________
consensus             GTTACTGCTATTAGTATGAAGTTGATACACATAACTTCTTTGTCTTTTGTAGTTCAGTTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF047E13+          GCCAAACTCTGCCCTGCATCCATTCAGAATAATTAAGATGATGTAGTGTGCTCTGTAACT
                      ____________________________________________________________
consensus             GCCAAACTCTGCCCTGCATCCATTCAGAATAATTAAGATGATGTAGTGTGCTCTGTAACT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF047E13+          GATATTTTGCCAAGCTAATTATTATTATTATTCAAAAAAAAAAAAAAAACTCTCCAGGGT
                      ____________________________________________________________
consensus             GATATTTTGCCAAGCTAATTATTATTATTATTCAAAAAAAAAAAAAAAACTCTCCAGGGT