Contig 005535:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF047B24Sequence620002377 (3)ref|XP_009593160.1|9e-61PREDICTED: uncharacterized PKHD-type hydroxylase At1g22950-like [Nicotiana tome546005535 (3)ref|XP_011076106.1|1e-39PREDICTED: uncharacterized PKHD-type hydroxylase At1g22950 [Sesamum indicum]
JMSF038D24Sequence710002377 (3)ref|XP_009593160.1|1e-81PREDICTED: uncharacterized PKHD-type hydroxylase At1g22950-like [Nicotiana tome856005535 (3)ref|XP_011076106.1|1e-137PREDICTED: uncharacterized PKHD-type hydroxylase At1g22950 [Sesamum indicum]
JMSF038L22Sequence623002377 (3)ref|XP_009593160.1|3e-59PREDICTED: uncharacterized PKHD-type hydroxylase At1g22950-like [Nicotiana tome843005535 (3)ref|XP_011076106.1|4e-126PREDICTED: uncharacterized PKHD-type hydroxylase At1g22950 [Sesamum indicum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF038D24+ CTTTGAGATGCTGCAGCCTCGT
                      ____________________________________________________________
consensus CTTTGAGATGCTGCAGCCTCGT
 
. : . : . : . : . : . :
rJMSF038D24+ TTCTGTGAAATGCTTCTGGCTGAGGTAGAAAATTTTGAAAAGTGGGTCCATGAAACAAAA
rJMSF038L22+ AGGTAGAAAATTTTGAAAAGTGGGTCCATGAAACAAAA
                      ____________________________________________________________
consensus TTCTGTGAAATGCTTCTGGCTGAGGTAGAAAATTTTGAAAAGTGGGTCCATGAAACAAAA
 
. : . : . : . : . : . :
rJMSF038D24+ TTCAGAATTATGAGACCAAATACAATGAACAAATTTGGTGCTGTTCTTGATGACTTTGGC
rJMSF038L22+ TTCAGAATTATGAGACCAAATACAATGAACAAATTTGGTGCTGTTCTTGATGACTTTGGC
                      ____________________________________________________________
consensus TTCAGAATTATGAGACCAAATACAATGAACAAATTTGGTGCTGTTCTTGATGACTTTGGC
 
. : . : . : . : . : . :
rJMSF038D24+ ATGGAAACCATGCTTGAGAAGTTGATGGAAGATTTCATTCGTCCTATTTCTAAAGTTTTC
rJMSF038L22+ ATGGAAACCATGCTTGAGAAGTTGATGGAAGATTTCATTCGTCCTATTTCTAAAGTTTTC
                      ____________________________________________________________
consensus ATGGAAACCATGCTTGAGAAGTTGATGGAAGATTTCATTCGTCCTATTTCTAAAGTTTTC
 
. : . : . : . : . : . :
rJMSF038D24+ TTTTCAGAGGTTGGTGGATCCACACTTGATACACATCATGGTTTTGTGGTTGAGTATGGA
rJMSF038L22+ TTTTCAGAGGTTGGTGGATCCACACTTGATACACATCATGGTTTTGTGGTTGAGTATGGA
                      ____________________________________________________________
consensus TTTTCAGAGGTTGGTGGATCCACACTTGATACACATCATGGTTTTGTGGTTGAGTATGGA
 
. : . : . : . : . : . :
rJMSF038D24+ ATGGATAGAGATGTTGACCTAGGTTTCCACGTGGATGATTCAGAAGTCACGTTGAATGTG
rJMSF038L22+ ATGGATAGAGATGTTGACCTAGGTTTCCACGTGGATGATTCAGAAGTCACGTTGAATGTG
                      ____________________________________________________________
consensus ATGGATAGAGATGTTGACCTAGGTTTCCACGTGGATGATTCAGAAGTCACGTTGAATGTG
 
. : . : . : . : . : . :
rJMSF038D24+ TGTTTGGGCAAGCAGTTTTCTGGTGGAGAACTGTTTTTTCGTGGCATTCGTTGTGAGAAA
rJMSF038L22+ TGTTTGGGCAAGCAGTTTTCTGGTGGAGAACTGTTTTTTCGTGGCATTCGTTGTGAGAAA
rJMFF047B24+ GAGAAA
                      ____________________________________________________________
consensus TGTTTGGGCAAGCAGTTTTCTGGTGGAGAACTGTTTTTTCGTGGCATTCGTTGTGAGAAA
 
. : . : . : . : . : . :
rJMSF038D24+ CATGTAAATACTGAAACACAACCAGAGGAGAGCTTTGACTATGCCCATGTCCCGGGCCGT
rJMSF038L22+ CATGTAAATACTGAAACACAACCAGAGGAGAGCTTTGACTATGCCCATGTCCCGGGCCGT
rJMFF047B24+ CATGTAAATTCTGAAACACAACCAGAGGAGAGCTTTGACTATGCCCATGTCCCGGGCCGT
                      ____________________________________________________________
consensus CATGTAAATACTGAAACACAACCAGAGGAGAGCTTTGACTATGCCCATGTCCCGGGCCGT
 
. : . : . : . : . : . :
rJMSF038D24+ GCAGTTCTTCACCGTGGTCGGCATCGGCATGGCGCTAGAGCCACAACAGCAGGCCAGAGG
rJMSF038L22+ GCAGTTCTTCACCGTGGTCGGCATCGGCATGGCGCTAGAGCCACAACAGCAGGCCAGAGG
rJMFF047B24+ GCAGTTCTTCACCGTGGTCGGCATCGGCATGGCGCTAGAGCCACAACAGCAGGCCAGAGG
                      ____________________________________________________________
consensus GCAGTTCTTCACCGTGGTCGGCATCGGCATGGCGCTAGAGCCACAACAGCAGGCCAGAGG
 
. : . : . : . : . : . :
rJMSF038D24+ ATTAACTTACTGCTTTGGTGCAGAAGTTCTGTGTTTAGAGAGCTCAGGAAGTATCAGAAA
rJMSF038L22+ ATTAACTTACTGCTTTGGTGCAGAAGTTCTGTGTTTAGAGAGCTCAGGAAGTATCAGAAA
rJMFF047B24+ ATTAACTTACTGCTTTGGTGCAGAAGTTCTGTGTTTAGAGAGCTCAGGAAGTATCAGAAA
                      ____________________________________________________________
consensus ATTAACTTACTGCTTTGGTGCAGAAGTTCTGTGTTTAGAGAGCTCAGGAAGTATCAGAAA
 
. : . : . : . : . : . :
rJMSF038D24+ GATTTTTCTAGCTGGTGTTCCGAATGCCAGCGCGAGAAGAAGGAAAGGCAACGGCAGTCA
rJMSF038L22+ GATTTTTCTAGCTGGTGTTCCGAATGCCAGCGCGAGAAGAAGGAAAGGCAACGGCAGTCA
rJMFF047B24+ GATTTTTCTAGCTGGTGTTCCGAATGCCAGCGCGAGAAGAAGGAAAGGCAACGGCAGTCA
                      ____________________________________________________________
consensus GATTTTTCTAGCTGGTGTTCCGAATGCCAGCGCGAGAAGAAGGAAAGGCAACGGCAGTCA
 
. : . : . : . : . : . :
rJMSF038D24+ GTCGCCGCCACTAAATTGGAGCTACTGAGAAGAGAAGAAGCGGCTTCATAGTTGATTTGC
rJMSF038L22+ GTCGCCGCCACTAAATTGGAGCTACTGAGAAGAGAAGAAGCGGCTTCATAGTTGATTTGC
rJMFF047B24+ GTCGCCGCCACTAAATTGGAGCTACTGAGAAGAGAAGAAGCGGCTTCATAGTTGATTTGC
                      ____________________________________________________________
consensus GTCGCCGCCACTAAATTGGAGCTACTGAGAAGAGAAGAAGCGGCTTCATAGTTGATTTGC
 
. : . : . : . : . : . :
rJMSF038D24+ GGCCCTGCCTAGGCCGGGCTGGGCTCCGACTTTATTTTCATTTGTTGTTTAATACTCTCT
rJMSF038L22+ GGCCCTGCCTAGGCCGGGCTGGGCTCCGACTTTATTTTCATTTGTTGTTTAATACTCTCT
rJMFF047B24+ GGCCCTGCCTAGGCCGGGCTGGGCTCCGACTTTATTTTCATTTGTTGTTTAATACTCTCT
                      ____________________________________________________________
consensus GGCCCTGCCTAGGCCGGGCTGGGCTCCGACTTTATTTTCATTTGTTGTTTAATACTCTCT
 
. : . : . : . : . : . :
rJMSF038D24+ GTAATATAGTGCACCCCTCTTATTTAGGGTATAAAATGCAGTTTCTTAGTGGGGATATTT
rJMSF038L22+ GTAATATAGTGCACCCCTCTTATTTAGGGTATAAAATGCAGTTTCTTAGTGGGGATATTT
rJMFF047B24+ GTAATATAGTGCACCCCTCTTATTTAGGGTATAAAATGCAGTTTTTTAGTGGGGATATTT
                      ____________________________________________________________
consensus GTAATATAGTGCACCCCTCTTATTTAGGGTATAAAATGCAGTTTCTTAGTGGGGATATTT
 
. : . : . : . : . : . :
rJMSF038D24+ GGAAGGGTGATATACATTTTTCAGCTGTTTCCAAAAGTAGCTGTACAT
rJMSF038L22+ GGAAGGGTGATATACATTTTTCAGCTGTTTCCAAAAGTAGCTGTACATTGAATCAATTAA
rJMFF047B24+ GGAAGGGTGATATACATTTTTCAGCTGTTTCCAAAAGTAGCTGTACATTGAATCAATTAA
                      ____________________________________________________________
consensus GGAAGGGTGATATACATTTTTCAGCTGTTTCCAAAAGTAGCTGTACATTGAATCAATTAA
 
. : . : . : . : . : . :
rJMSF038L22+ TGTAGGTATCATGT
rJMFF047B24+ TGTAGGTATCATGTTGTCCAGTTTGCTAACTTGGAAGTCAATAACATATTTTTACCATTT
                      ____________________________________________________________
consensus TGTAGGTATCATGTTGTCCAGTTTGCTAACTTGGAAGTCAATAACATATTTTTACCATTT