| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF012A24 | Sequence | 556 | 000052 (3) | ref|XP_009627394.1| | 3e-25 | PREDICTED: pectinesterase-like [Nicotiana tomentosiformis] | 715 | 005527 (3) | ref|XP_009627394.1| | 5e-100 | PREDICTED: pectinesterase-like [Nicotiana tomentosiformis] |
| JMFF013M02 | Sequence | 620 | 000052 (3) | emb|CDP17031.1| | 8e-37 | unnamed protein product [Coffea canephora] | 703 | 005527 (3) | ref|XP_009627394.1| | 2e-97 | PREDICTED: pectinesterase-like [Nicotiana tomentosiformis] |
| JMFF045N16 | Sequence | 643 | 000052 (3) | emb|CDP17031.1| | 3e-39 | unnamed protein product [Coffea canephora] | 588 | 005527 (3) | ref|XP_009627394.1| | 7e-60 | PREDICTED: pectinesterase-like [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
rJMFF013M02+ CAGAAGGGCATCAAGCGGTGGCTTATCGTAGCC
rJMFF012A24+ ACCGCAGGTCCAGAAGGGCATCAAGCGGTGGCTTATCGTAGCC
____________________________________________________________
consensus ACCGCAGGTCCAGAAGGGCATCAAGCGGTGGCTTATCGTAGCC
. : . : . : . : . : . :
rJMFF013M02+ AATCTGATATGTCAGCCATTTTTGACTGCTCCATTGAAGGATACCAAGATACACTATATT
rJMFF012A24+ AATNTGATATGTCAGCCATTTTTGACTGCTCCATTGAAGGATACCAAGATACACTATATT
____________________________________________________________
consensus AATCTGATATGTCAGCCATTTTTGACTGCTCCATTGAAGGATACCAAGATACACTATATT
. : . : . : . : . : . :
rJMFF013M02+ ACCACACCTATCGCCAATTCTACCGCAACTGCGTCATCTCCGGCACCATCGACTTTATCT
rJMFF012A24+ ACCACACCTATCGCCAATTCTACCGCAACTGCGTCATCTCCGGCACCATCGACTTTATCT
____________________________________________________________
consensus ACCACACCTATCGCCAATTCTACCGCAACTGCGTCATCTCCGGCACCATCGACTTTATCT
. : . : . : . : . : . :
rJMFF013M02+ TTGGCAAGGGGACTGCACTCATCCAGAACAGCATCATCATTGCCAGGAAACCCTTGGTAC
rJMFF012A24+ TTGGCAAGGGGACTGCACTCATCCAGAACAGCATCATCATTGCCAGGAAACCCTTGGTAC
rJMFF045N16+ CTGCACTCATCCAGAACAGCATCATCATTGCCAGGAAACCCTTGGTAC
____________________________________________________________
consensus TTGGCAAGGGGACTGCACTCATCCAGAACAGCATCATCATTGCCAGGAAACCCTTGGTAC
. : . : . : . : . : . :
rJMFF013M02+ ATCAATTCAACACCATTACAGCTGATGGTAAAGAGTTGGCCAAGGCCAAAGGTGGAGTGG
rJMFF012A24+ ATCAATTCAACACCATTACAGCTGATGGTAAAGAGTTGGCCAAGGCCAAAGGTGGAGTGG
rJMFF045N16+ ATCAATTCAACACCATTACAGCTGATGGTAAAGAGTTGGCCAAGGCCAAAGGTGGAGTGG
____________________________________________________________
consensus ATCAATTCAACACCATTACAGCTGATGGTAAAGAGTTGGCCAAGGCCAAAGGTGGAGTGG
. : . : . : . : . : . :
rJMFF013M02+ TACTCCAGAACTGCAGAATTGTTCCTGAAACTGCGCTTAACCCATTGAGGTTCAAGGTAA
rJMFF012A24+ TACTCCAGAACTGCAGAATTGTTCCTGAAACTGCGCTTAACCCATTGAGGTTCAAGGTAA
rJMFF045N16+ TACTCCAGAACTGCAGAATTGTTCCTGAAACTGCGCTTAACCCATTGAGGTTCAAGGTAA
____________________________________________________________
consensus TACTCCAGAACTGCAGAATTGTTCCTGAAACTGCGCTTAACCCATTGAGGTTCAAGGTAA
. : . : . : . : . : . :
rJMFF013M02+ AAACTTATTTCGGAAGACCTTGGAAGGCTTACTCCACAACCGTGGTGATGGAGAGCCAAA
rJMFF012A24+ AAACTTATTTCGGAAGACCTTGGAAGGCTTACTCCACAACCGTGGTGATGGAGAGCCAAA
rJMFF045N16+ AAACTTATTTCGGAAGACCTTGGAAGGCTTACTCCACAACCGTGGTGATGGAGAGCCAAA
____________________________________________________________
consensus AAACTTATTTCGGAAGACCTTGGAAGGCTTACTCCACAACCGTGGTGATGGAGAGCCAAA
. : . : . : . : . : . :
rJMFF013M02+ TAGGTGATTTGTTGAGCCCTCTTGGATGGAAGATTTGGGATGGGGAGAATTTTGAGAAGA
rJMFF012A24+ TAGGTGATTTGTTGAGCCCTCTTGGATGGAAGATTTGGGATGGGGAGAATTTTGAGAAGA
rJMFF045N16+ TAGGTGATTTGTTGAGCCCTCTTGGATGGAAGATTTGGGATGGGGAGAATTTTGAGAAGA
____________________________________________________________
consensus TAGGTGATTTGTTGAGCCCTCTTGGATGGAAGATTTGGGATGGGGAGAATTTTGAGAAGA
. : . : . : . : . : . :
rJMFF013M02+ CTTGTATGTATTATGAGTATAAGAATAGCGGACCAGGTGCAAACACCTGGAGGAGGAACA
rJMFF012A24+ CTTGTATGTATTATGAGTATAAGAATAGCGGACCAGGTGCAAACACCTGGAGGAGGAACA
rJMFF045N16+ CTTGTATGTATTATGAGTATAAGAATAGCGGACCAGGTGCAAACACCTGGAGGAGGAACA
____________________________________________________________
consensus CTTGTATGTATTATGAGTATAAGAATAGCGGACCAGGTGCAAACACCTGGAGGAGGAACA
. : . : . : . : . : . :
rJMFF013M02+ GAGCCTTCAAGAAATTTGACGTGCTTGGTCCCATAAGAGCTCGACATTTCACTGCTGGAC
rJMFF012A24+ GAGCCTTCAAGAAATTTGACGTGCTTGGTCCCATAAGAGCTCGACATTTCACTGCTGGAC
rJMFF045N16+ GAGCCTTCAAGAAATTTGACGTGCTTGGTCCCATAAGAGCTCGACATTTCACTGCTGGAC
____________________________________________________________
consensus GAGCCTTCAAGAAATTTGACGTGCTTGGTCCCATAAGAGCTCGACATTTCACTGCTGGAC
. : . : . : . : . : . :
rJMFF013M02+ TTTGGCTTGACGCAAACAGCTGGTTGCCTGCCACTGGAGTACCTTTCGCCATTGGTTACA
rJMFF012A24+ TTTGGCTTGACGCAAACAGCTGGTTGCCTGCCACTGGAGTACCTTTCGCCATTGGTTACA
rJMFF045N16+ TTTGGCTTGACGCAAACAGCTGGTTGCCTGCCACTGGAGTACCTTTCGCCATTGGTTACA
____________________________________________________________
consensus TTTGGCTTGACGCAAACAGCTGGTTGCCTGCCACTGGAGTACCTTTCGCCATTGGTTACA
. : . : . : . : . : . :
rJMFF013M02+ CTAAATAAGTATATGTTTGGATGAAATTCGTTCGGGTCGCATGTATACATTTTATTAAAT
rJMFF012A24+ CTAAATAAGTATATGTTTGGATGAAATTCGTTCGGGTCGCATGTATACATTTTATTAAAT
rJMFF045N16+ CTAAATAAGTATATGTTTGGATGAAATTCGTTCGGGTCGCATGTATACATTTTATTAAAT
____________________________________________________________
consensus CTAAATAAGTATATGTTTGGATGAAATTCGTTCGGGTCGCATGTATACATTTTATTAAAT
. : . : . : . : . : . :
rJMFF013M02+ AATAATAATA
rJMFF012A24+ AATAATAATA
rJMFF045N16+ AATAATAATAATTTCATTTATATTGGTTAATTATAAAAAAAAAAAAAAACTCTCCAGGGT
____________________________________________________________
consensus AATAATAATAATTTCATTTATATTGGTTAATTATAAAAAAAAAAAAAAACTCTCCAGGGT