| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF045J07 | Sequence | 626 | 000523 (6) | ref|XP_009772211.1| | 4e-51 | PREDICTED: probable serine/threonine-protein kinase DDB_G0280111 [Nicotiana syl | 577 | 005526 (5) | ref|XP_009607019.1| | 2e-22 | PREDICTED: probable serine/threonine-protein kinase DDB_G0280111 [Nicotiana tom |
| JMFS111C04 | Sequence | 553 | 005526 (5) | ref|XP_009607019.1| | 6e-23 | PREDICTED: probable serine/threonine-protein kinase DDB_G0280111 [Nicotiana tom | |||||
| JMSF009P03 | Sequence | 274 | 000523 (6) | 743 | 005526 (5) | ref|XP_009772211.1| | 5e-53 | PREDICTED: probable serine/threonine-protein kinase DDB_G0280111 [Nicotiana syl | |||
| JMSF014O07 | Sequence | 387 | 000523 (6) | emb|CDP07694.1| | 2e-10 | unnamed protein product [Coffea canephora] | 779 | 005526 (5) | ref|XP_009772211.1| | 3e-67 | PREDICTED: probable serine/threonine-protein kinase DDB_G0280111 [Nicotiana syl |
| JMSF035M22 | Sequence | 591 | 000523 (6) | ref|XP_009772211.1| | 9e-64 | PREDICTED: probable serine/threonine-protein kinase DDB_G0280111 [Nicotiana syl | 682 | 005526 (5) | ref|XP_009772211.1| | 2e-34 | PREDICTED: probable serine/threonine-protein kinase DDB_G0280111 [Nicotiana syl |
This contig is upended
. : . : . : . : . : . :
rJMSF014O07+ GGAAAGAGGATCTAT
____________________________________________________________
consensus GGAAAGAGGATCTAT
. : . : . : . : . : . :
rJMSF014O07+ TAGAGGCTGAGGTTGAAAAGCTGAAGGAACAGCTAACACATACCAACATGGAGAAAGCTG
rJMSF009P03+ AGCTG
____________________________________________________________
consensus TAGAGGCTGAGGTTGAAAAGCTGAAGGAACAGCTAACACATACCAACATGGAGAAAGCTG
. : . : . : . : . : . :
rJMSF014O07+ AAATTACGTCGAAATTTGAAAAACTATCTGCCATATGTAGGTCACAGCGGCAGGAGATAC
rJMSF035M22+ GTCACAGCGGCAGGAGATAC
rJMSF009P03+ AAATTACGTCGAAATTTGAAAAACTATCTGCCATATGTAGGTCACAGCGGCAGGAGATAC
____________________________________________________________
consensus AAATTACGTCGAAATTTGAAAAACTATCTGCCATATGTAGGTCACAGCGGCAGGAGATAC
. : . : . : . : . : . :
rJMSF014O07+ AAGAACTCAAGCAAGCCCTCGCTGCTAAAACTCCATCACCAAATCGAGATACCTTGAGAA
rJMSF035M22+ CAGAACTCAAGCAAG-CCTCGCTGCTAAAACTCCATCACCAAATCGAGATACCTTGAGAA
rJMSF009P03+ AAGAACTCAAGCAAGCCCTCGCTGCTAAAACTCCATCACCAAATCGAGATACCTTGAGAA
____________________________________________________________
consensus AAGAACTCAAGCAAGCCCTCGCTGCTAAAACTCCATCACCAAATCGAGATACCTTGAGAA
. : . : . : . : . : . :
rJMSF014O07+ ACCAATCATCTCCTAAAAGTCAAACATTCAGTACCCCCCCACAGCAGAGGGAAACCATTG
rJMSF035M22+ ACCAATCATCTCCTAAAAGTCAAACATTCAGTACCCCCCCACAGCAGAGGGAAACCATTG
rJMSF009P03+ ACCAATCATCTCCTAAAAGTCAAACATTCAGTACCCCCCCACA---GAGGGAAACCATTG
____________________________________________________________
consensus ACCAATCATCTCCTAAAAGTCAAACATTCAGTACCCCCCCACAGCAGAGGGAAACCATTG
. : . : . : . : . : . :
rJMSF014O07+ AAGGAACTGTCTGGGAACTGCAACAAGGCCTGTTGAACCAGAGCTCCTCAAGCCCAGATC
rJMSF035M22+ AAGGANCTGTCTGGGAACTGCAACAAGGCCTGTTGAACCAGAGCTCCTCAAGCCCAGATC
rJMSF009P03+ AAGGAACTGTCTGGGAACTGCAACAAGGCCTGTTGAACCAGAGCTCCTCAAGCCCAGATC
JMFS111C04- ACAAGGCCTGTTGAACCAGAGCTCCTCAAGCCCAGATC
rJMFF045J07+ CAAGGCCTGTTGAACCATAGCTCCTCAAGCCCAGATC
____________________________________________________________
consensus AAGGAACTGTCTGGGAACTGCAACAAGGCCTGTTGAACCAGAGCTCCTCAAGCCCAGATC
. : . : . : . : . : . :
rJMSF014O07+ CCTCGGCATGGCAGGCCTTTGCTGACGATGGTCCTAAACCGCTCACAACTCCTCCTCCCA
rJMSF035M22+ CCTCGGCATGGCAGGCCTTTGCTGACGATGGTCCTAAACCGCTCACAACTCCTCCTCCCA
rJMSF009P03+ CCTCGGCATGGCAGGCCTTTGCTGACGATGGTCCTAAACCGCTCACAACTCCTCCTCCCA
JMFS111C04- CCTCGGCATGGCAGGCCTTTGCTGACGATGGTCCTAAACCGCTCACAACTCCTCCTCCCA
rJMFF045J07+ CCTCGGCATGGCAGGCCTTTGCTGACGATGGTCCTAAACCGTTCACAACTCCTCCTCCCA
____________________________________________________________
consensus CCTCGGCATGGCAGGCCTTTGCTGACGATGGTCCTAAACCGCTCACAACTCCTCCTCCCA
. : . : . : . : . : . :
rJMSF014O07+ GCAACACTCCACGGTCTATGAGAACAAGGAATAACCAGCCACCGAATACGCAGGATTCTA
rJMSF035M22+ GCAACACTCCACGGTCTATGAGAACAAGGAATAACCAGCCACCGAATACGCAGGATTCTA
rJMSF009P03+ GCAACACTCCACGGTCTATGAGAACAAGGAATAACCAGCCACCGAATACGCAGGATTCTA
JMFS111C04- GCAACACTCCACGGTCTATGAGAACAAGGAATAACCAGCCACCGAATACGCAGGATTCTA
rJMFF045J07+ GCAACACTCCACGGTCTATGAGAACAAGGAATAACCAGCCACCGAATACGCAGGATTCTA
____________________________________________________________
consensus GCAACACTCCACGGTCTATGAGAACAAGGAATAACCAGCCACCGAATACGCAGGATTCTA
. : . : . : . : . : . :
rJMSF014O07+ CTGCCAGCGCTTGGGGATTCGGGACCGATAGTTTTACAGCAGTTCCTTCTGCTACCTCTC
rJMSF035M22+ CTGCCAGCGCTTGGGGATTCGGGACCGATAGTTTTACAGCAGTTCCTTCTGCTACCTCTC
rJMSF009P03+ CTGCCAGCGCTTGGGGATTCGGGACCGATAGTTTTACAGCAGTTCCTTCTGCTACCTCTC
JMFS111C04- CTGCCAGCGCTTGGGGATTCGGGACCGATAGTTTTACAGCAGTTCCTTCTGCTACCTCTC
rJMFF045J07+ CTGCCAGCGCTTGGGGATTCGGGACCGATAGTTTTACAGCAGTTCCTTCTGCTACCTCTC
____________________________________________________________
consensus CTGCCAGCGCTTGGGGATTCGGGACCGATAGTTTTACAGCAGTTCCTTCTGCTACCTCTC
. : . : . : . : . : . :
rJMSF014O07+ AGATGAACGCTTCTTTCAGTGATCGAAACAATTCCCAGCGTTTTGGCGACAAGCGCGTGG
rJMSF035M22+ AGATGAACGCTTCTTTCAGTGATCGAAACAATTCCCAGCGTTTTGGCGACAAGCGCGTGG
rJMSF009P03+ AGATGAACGCTTCTTTCAGTGATCGAAACAATTCCCAGCGTTTTGGCGACAAGCGCGTGG
JMFS111C04- AGATGAACGCTTCTTTCAGTGATCGAAACAATTCCCAGCGTTTTGGCGACAAGCGCGTGG
rJMFF045J07+ AGATGAACGCTTCTTTCAGTGATCGAAACAATTCCCAGCGTTTTGGCGACAAGCGCGTGG
____________________________________________________________
consensus AGATGAACGCTTCTTTCAGTGATCGAAACAATTCCCAGCGTTTTGGCGACAAGCGCGTGG
. : . : . : . : . : . :
rJMSF014O07+ ACAACAAATCGGCATCCCAACCTGCTGGATGGGCAGGCTTCTAGGCAAGTGCCCTTTGCC
rJMSF035M22+ ACAACAAATCGGCATCCCAACCTGCTGGATGGGCAGGCTTCTAGGCAAGTGCCCTTTGCC
rJMSF009P03+ ACAACAAATCGGCATCCCAACCTGCTGGATGGGCAGGCTTCTAGGCAAGTGCCCTTTGCC
JMFS111C04- ACAACAAATCGGCATCCCAACCTGCTGGATGGGCAGGCTTCTAGGCAAGTGCCCTTTGCC
rJMFF045J07+ ACAACAAATCGGCATCCCAACCTGCTGGATGGGCAGGCTTCTAGGCAAGTGCCCTTTGCC
____________________________________________________________
consensus ACAACAAATCGGCATCCCAACCTGCTGGATGGGCAGGCTTCTAGGCAAGTGCCCTTTGCC
. : . : . : . : . : . :
rJMSF014O07+ AAGATGGAGTTTGGGAAACAGTTTGAGGTCACCTGCTTCCTAATAGAACATGATTTTTGT
rJMSF035M22+ AAGATGGAGTTTGGGAAACAGTTTGAGGTCACCTGCTTCCTAATAGAACATGATTTTTGT
rJMSF009P03+ AAGATGGAGTTTGGGAAACAGTTTGAGGTCACCTGCTTCCTAATAGAACATGATTTTTGT
JMFS111C04- AAGATGGAGTTTGGGAAACAGTTTGAGGTCACCTGCTTCCTAATAGAACATGATTTTTGT
rJMFF045J07+ AAGATGGAGTTTGGGAAACAGTTTGAGGTCACCTGCTTCCTAATAGAACATGATTTTTGT
____________________________________________________________
consensus AAGATGGAGTTTGGGAAACAGTTTGAGGTCACCTGCTTCCTAATAGAACATGATTTTTGT
. : . : . : . : . : . :
rJMSF014O07+ CTTATGAAAGAGAACATGGCTGTGATAACAATAAAAGTATAGTAAAGGAAAAGAAAAAGA
rJMSF035M22+ CTTATGAAAGAGAACATGGCTGTGATAACAATAAAAGTATAGTAAAGGAAAAGAAAAAGA
rJMSF009P03+ CTTATGAAAGAGAACATGGCTGTGATAACAATAAAAGTATAGTAAAGGAAAAGAAAAAGA
JMFS111C04- CTTATGAAAGAGAACATGGCTGTGATAACAATAAAAGTATAGTAAAGGAAAAGAAAAAGA
rJMFF045J07+ CTTATGAAAGAGAACATGGCTGTGATAACAATAAAAGTATAGTAAAGGAAAAGAAAAAGA
____________________________________________________________
consensus CTTATGAAAGAGAACATGGCTGTGATAACAATAAAAGTATAGTAAAGGAAAAGAAAAAGA
. : . : . : . : . : . :
rJMSF014O07+ ATTGAATGGTGGTGGTGGTCTGAGGTTGTGGTGTTGAATGTGT
rJMSF035M22+ ATTGAATGGTGGTGGTGGTCTGAGGTTGTGGTGTTGAATGTGTTGTGTAGAGATT
rJMSF009P03+ ATTGAATGGTGGTGGTGGTCTGAGGTTGTGGTGTTGAATGTGTTGTGTAGAGATTTGGTT
JMFS111C04- ATTGAATGGTGGTGGTGGTCTGAGGTTGTGGTGTTGAATGTGTTGTGTAGAGATTTGGTT
rJMFF045J07+ ATTGAATGGTGGTGGTGGTCTGAGGTTGTGGTGTTGAATGTGTTGTGTAGAGATTTGGTT
____________________________________________________________
consensus ATTGAATGGTGGTGGTGGTCTGAGGTTGTGGTGTTGAATGTGTTGTGTAGAGATTTGGTT
. : . : . : . : . : . :
rJMSF009P03+ ATATAATTCTACTCTGTTTAT
JMFS111C04- ATATAATTCTACTCTGTTTATTACATTTCT
rJMFF045J07+ ATATAATTCTACTCTGTTTATTACATTTCTACAATACTCTATGCTATTTTACATATTTCC
____________________________________________________________
consensus ATATAATTCTACTCTGTTTATTACATTTCTACAATACTCTATGCTATTTTACATATTTCC