| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF006C23 | Sequence | 532 | 000253 (7) | ref|XP_004244440.1| | 6e-36 | PREDICTED: long-chain-alcohol oxidase FAO4A-like [Solanum lycopersicum] | 641 | 005523 (4) | gb|KDP37816.1| | 6e-65 | hypothetical protein JCGZ_06718 [Jatropha curcas] |
| JMFF008F09 | Sequence | 570 | 000253 (7) | ref|XP_004244440.1| | 2e-42 | PREDICTED: long-chain-alcohol oxidase FAO4A-like [Solanum lycopersicum] | 394 | 005523 (4) | gb|KDP37816.1| | 2e-31 | hypothetical protein JCGZ_06718 [Jatropha curcas] |
| JMFF029F09 | Sequence | 395 | 000253 (7) | ref|XP_009626278.1| | 2e-16 | PREDICTED: long-chain-alcohol oxidase FAO4A [Nicotiana tomentosiformis] | 557 | 005523 (4) | gb|KDP37816.1| | 6e-56 | hypothetical protein JCGZ_06718 [Jatropha curcas] |
| JMFF045H12 | Sequence | 640 | 000253 (7) | ref|XP_004244440.1| | 9e-52 | PREDICTED: long-chain-alcohol oxidase FAO4A-like [Solanum lycopersicum] | 645 | 005523 (4) | gb|KDP37816.1| | 1e-57 | hypothetical protein JCGZ_06718 [Jatropha curcas] |
This contig is upended
. : . : . : . : . : . :
rJMFF006C23+ TAGAGACAAGACCTCCGGGGAAGCCCCATCCC
____________________________________________________________
consensus TAGAGACAAGACCTCCGGGGAAGCCCCATCCC
. : . : . : . : . : . :
rJMFF006C23+ CATTCTCCATAAGCTACAATATGCAAAAGACTGACAAAGTTAGCCTGAAAAACGGGCTGG
rJMFF029F09+ GGGCTGG
rJMFF045H12+ ACAATATGCAAAAGACTGACAAAGTTAGCCTGAAAAACGGGCTGG
____________________________________________________________
consensus CATTCTCCATAAGCTACAATATGCAAAAGACTGACAAAGTTAGCCTGAAAAACGGGCTGG
. : . : . : . : . : . :
rJMFF006C23+ AGAAGGTTCTGAGGATATTGGCAGCTGCCGGAGCTGAGGAGATAGGGACCTGCCATCGAG
rJMFF029F09+ AGAAGGTTCTGAGGATATTGGCAGCTGCCGGAGCTGAGGAGATAGGGACCTGCCATCGAG
rJMFF045H12+ AGAAGGTTCTGAGGATATTGGCAGCTGCCGGAGCTGAGGAGATAGGGACCTGCCATCGAG
____________________________________________________________
consensus AGAAGGTTCTGAGGATATTGGCAGCTGCCGGAGCTGAGGAGATAGGGACCTGCCATCGAG
. : . : . : . : . : . :
rJMFF006C23+ CCGGGAAGATACTGAAACCGAAGGGGGCTAGCAGAGACGAAATCGACGAGTTTGTGGAGA
rJMFF029F09+ CCGGGAAGATACTGAAACCGAAGGGGGCTAGCAGAGACGAAATCGACGAGTTTGTGGAGA
rJMFF045H12+ CCGGGAAGATACTGAAACCGAAGGGGGCTAGCAGAGACGAAATCGACGAGTTTGTGGAGA
____________________________________________________________
consensus CCGGGAAGATACTGAAACCGAAGGGGGCTAGCAGAGACGAAATCGACGAGTTTGTGGAGA
. : . : . : . : . : . :
rJMFF006C23+ AAGAGAGCTCAAGGGACCTGGGAAACCTGTCAACACTCATAGGCTCTGCACATCAAATGG
rJMFF008F09+ TCATAGGCTCTGCACATCAAATGG
rJMFF029F09+ AAGAGAGCTCAAGGGACCTGGGAAACCTGTCAACACTCATAGGCTCTGCACATCAAATGG
rJMFF045H12+ AAGAGAGCTCAAGGGACCTGGGAAACCTGTCAACACTCATAGGCTCTGCACATCAAATGG
____________________________________________________________
consensus AAGAGAGCTCAAGGGACCTGGGAAACCTGTCAACACTCATAGGCTCTGCACATCAAATGG
. : . : . : . : . : . :
rJMFF006C23+ GGAGTTGCAGAATGGGGGTGGATCCAAGGAGCTCAGTGGTTAACCCCATGGGGGAAACTT
rJMFF008F09+ GGAGTTGCAGAATGGGGGTGGATCCAAGGAGCTCAGTGGTTAACCCCATGGGGGAAACTT
rJMFF029F09+ GGAGTTGCAGAATGGGGGTGGATCCAAGGAGCTCAGTGGTTAACCCCATGGGGGAAACTT
rJMFF045H12+ GGAGTTGCAGAATGGGGGTGGATCCAAGGAGCTCAGTGGTTAACCCCATGGGGGAAACTT
____________________________________________________________
consensus GGAGTTGCAGAATGGGGGTGGATCCAAGGAGCTCAGTGGTTAACCCCATGGGGGAAACTT
. : . : . : . : . : . :
rJMFF006C23+ GGGAGGTGGAAGGGCTGTTTTTGGCCGATTCCAGCGTCTTCCCAACGGCTCTCGGCGTCA
rJMFF008F09+ GGGAGGTGGAAGGGCTGTTTTTGGCCGATTCCAGCGTCTTCCCAACGGCTNTNGGCGTCA
rJMFF029F09+ GGGAGGTGGAAGGGCTGTTTTTGGCCGATTCCAGCGTCTTCCCAACGGCTCTCGGCGTCA
rJMFF045H12+ GGGAGGTGGAAGGGCTGTTTTTGGCCGATTCCAGCGTCTTCCCAACGGCTCTCGGCGTCA
____________________________________________________________
consensus GGGAGGTGGAAGGGCTGTTTTTGGCCGATTCCAGCGTCTTCCCAACGGCTCTCGGCGTCA
. : . : . : . : . : . :
rJMFF006C23+ ATCCTATGGTCACCGTTCAGGCCATTGCATATTGCACAGCACAGTCTGTGCTTAAGTTCT
rJMFF008F09+ ATCNTATGGTCACCGTTCAGGCCATTGCATATTGCACAGCACAGTCTGTGCTTAAGTTGT
rJMFF029F09+ ATCCTATGGTCACCGTTCAGGCCATTGCATATTGCACAGCACAGTCTGTGCTTAAGTTCT
rJMFF045H12+ ATCCTATGGTCACCGTTCAGGCCATTGCATATTGCACAGCACAGTCTGTGCTTAAGTTCT
____________________________________________________________
consensus ATCCTATGGTCACCGTTCAGGCCATTGCATATTGCACAGCACAGTCTGTGCTTAAGTTCT
. : . : . : . : . : . :
rJMFF006C23+ TGAAAACACACAACCATATGCAGGGATACATTAAAGGGGATTCTAACTTCTAAGTTCTAA
rJMFF008F09+ TGAAAACACACAACCATATGCAGGGATACATTAAAGGGGATTCTAACTTCTAAGTTNTAA
rJMFF029F09+ TGAAAACACACAACCATATGCAGGGATACATTAAAGGGGATTCTAACTTCTAAGTTCTAA
rJMFF045H12+ TGAAAACACACAACCATATGCAGGGATACATTAAAGGGGATTCTAACTTCTAAGTTCTAA
____________________________________________________________
consensus TGAAAACACACAACCATATGCAGGGATACATTAAAGGGGATTCTAACTTCTAAGTTCTAA
. : . : . : . : . : . :
rJMFF006C23+ GAGCATCTCCAACCTACTCAACACCAAAACATCAAATTTCTCCATCAAATGTCACATCAG
rJMFF008F09+ GAGCATCTCCAACCTACTCAACACCAAAACATCAAATTTCTCCATCAAATGTCACATCAG
rJMFF029F09+ GAGCATCTCCAACCTACTCAACACCAAAACATCAAATTTCTCCATCAAATGTCACATCAG
rJMFF045H12+ GAGCATCTCCAACCTACTCAACACCAAAACATCAAATTTCTCCATCAAATGTCACATCAG
____________________________________________________________
consensus GAGCATCTCCAACCTACTCAACACCAAAACATCAAATTTCTCCATCAAATGTCACATCAG
. : . : . : . : . : . :
rJMFF006C23+ AATGAATATTGTCCGCATATTCTCACACCAAATTTTATTCATCTCCAGCGCATTTATACA
rJMFF008F09+ AATGAATATTGTCCGCATATTCTCACACCAAATTTTATTCATCTCCAGCGCATTTATACA
rJMFF029F09+ AATGAATATTGTCCGCATATTCTCACACCAAATTTTATTCATCTCCAGCGCATTTATACA
rJMFF045H12+ AATGAATATTGTCCGCATATTCTCACACCAAATTTTATTCATCTCCAGCGCATTTATACA
____________________________________________________________
consensus AATGAATATTGTCCGCATATTCTCACACCAAATTTTATTCATCTCCAGCGCATTTATACA
. : . : . : . : . : . :
rJMFF006C23+ AAACACCAA
rJMFF008F09+ AAACACCAA
rJMFF029F09+ AAACACCAA
rJMFF045H12+ AAACACCAAACTTTTACACTAAAAAAAAAAAAAAAACTCCCAGGGTGATCCGGCCAAAGG
____________________________________________________________
consensus AAACACCAAACTTTTACACTAAAAAAAAAAAAAAAACTCCCAGGGTGATCCGGCCAAAGG