| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF006J05 | Sequence | 533 | 011205 (25) | gb|AAL69381.1|AF462218_1 | 5e-85 | putative DEAD/DEAH box helicase [Narcissus pseudonarcissus] | 547 | 005515 (7) | emb|CDY37498.1| | 5e-30 | BnaC01g37340D [Brassica napus] |
| JMFF022C07 | Sequence | 502 | 011205 (25) | ref|XP_008798133.1| | 6e-66 | PREDICTED: eukaryotic initiation factor 4A-14 [Phoenix dactylifera] ref|XP_00879 | 385 | 005515 (7) | |||
| JMFF025G08 | Sequence | 547 | 011205 (25) | ref|XP_008798133.1| | 1e-91 | PREDICTED: eukaryotic initiation factor 4A-14 [Phoenix dactylifera] ref|XP_00879 | 433 | 005515 (7) | emb|CDY26130.1| | 4e-10 | BnaC06g10660D [Brassica napus] |
| JMFF037K15 | Sequence | 592 | 011205 (25) | ref|XP_008798133.1| | 8e-101 | PREDICTED: eukaryotic initiation factor 4A-14 [Phoenix dactylifera] ref|XP_00879 | 299 | 005515 (7) | |||
| JMFF043F20 | Sequence | 636 | 011205 (25) | ref|XP_008798133.1| | 2e-106 | PREDICTED: eukaryotic initiation factor 4A-14 [Phoenix dactylifera] ref|XP_00879 | 518 | 005515 (7) | emb|CDY37498.1| | 8e-43 | BnaC01g37340D [Brassica napus] |
| JMFF044E24 | Sequence | 622 | 011205 (25) | ref|XP_008798133.1| | 4e-105 | PREDICTED: eukaryotic initiation factor 4A-14 [Phoenix dactylifera] ref|XP_00879 | 591 | 005515 (7) | emb|CDY26130.1| | 6e-58 | BnaC06g10660D [Brassica napus] |
| JMFF050L24 | Sequence | 594 | 011205 (25) | ref|XP_008798133.1| | 4e-100 | PREDICTED: eukaryotic initiation factor 4A-14 [Phoenix dactylifera] ref|XP_00879 | 329 | 005515 (7) | |||
This contig is upended
. : . : . : . : . : . :
rJMFF006J05+ GGGAGTTCCGTTTTGGTTTTTCCAGGGTTTTAATCNC
rJMFF044E24+ AGGGACATCATCATGCGGGAGTTCCGTTCTGGTTCTTCCAGGGTTCTAATCAC
____________________________________________________________
consensus AGGGACATCATCATGCGGGAGTTCCGTTTTGGTTTTTCCAGGGTTTTAATCAC
. : . : . : . : . : . :
rJMFF043F20+ TGGCCCGTGGTATCGATGTTCAACAAGTGTCCCTTGTTATCAACTATGA
rJMFF006J05+ CCCTGATTTTTTGGCCCGNGGTATNGANGTTCAACAAGNGTCCCTTGTTATCAACTNTGN
rJMFF044E24+ CACTGATCTCTTGGCCCGTGGTATCGATGTTCAACAAGTGTCCCTTGTTATCAACTATGA
____________________________________________________________
consensus CCCTGATTTTTTGGCCCGTGGTATCGATGTTCAACAAGTGTCCCTTGTTATCAACTATGA
. : . : . : . : . : . :
rJMFF043F20+ CCTACCAACTCAGCCAGAGAACTACCTCCACCGTATCGGACGTAGTGGACGATTCGGTAG
rJMFF006J05+ CCTNCCAACTCANCCAGAGAACTNCCTCCCCCGTNTNGGACGTAGTGGNCGATTNGGTNG
rJMFF025G08+ GGACGTAGTGGNCGATTNGGTNG
rJMFF044E24+ CCTACCAACTCAGCCAGAGAACTACCTCCACCGTATCGGACGTAGTGGACGATTCGGTAG
____________________________________________________________
consensus CCTACCAACTCAGCCAGAGAACTACCTCCACCGTATCGGACGTAGTGGACGATTCGGTAG
. : . : . : . : . : . :
rJMFF043F20+ GAAGGGTGTCGCCATCAACTTCGTTACAAAGGATGACGACAGAATGCTTTTTGACATACA
rJMFF006J05+ GAAGGGNGTNGCCATCAACTTNGTTNCAAAGGANGNCGNCAGAATGCTTTTTGACATNCA
rJMFF025G08+ GAAGGGNGTNGCCNTCAACTTNGTTNCAAAGGANGNCGNCAGAATGCTTTTTGACATNCA
rJMFF022C07+ AACTTTGTTNCAAAGGANGNCGNCAGAATGCTTTTTGACATNCA
rJMFF044E24+ GAAGGGTGTCGCCATCAACTTCGTTACAAAGGATGACGACAGAATGCTTTTTGACATACA
____________________________________________________________
consensus GAAGGGTGTCGCCATCAACTTCGTTACAAAGGATGACGACAGAATGCTTTTTGACATACA
. : . : . : . : . : . :
rJMFF037K15+ TAACGTTGCAGATTTCCNGTAAAG
rJMFF043F20+ GAAGTTTTATAATGTTTTAGTTGAGGAGCTGCCGGCTAACGTTGCAGATCTCCTGTAATG
rJMFF006J05+ GAANTTTTATAANGTTTTAGTTGAGGAGCTGCCGGNTAACGTTGCAGATTTCCNGTAANG
rJMFF025G08+ GAANTTTTATAANGTTTTANTTGAGGAGCTGCCGGNTAACGTTGCAGATTTCCNGTAANG
rJMFF022C07+ GAANTTTTATAANGTTTTANTTGAGGAGNTGCCGGNTAACGTTGCAGATTTCCTGTAANG
rJMFF050L24+ AATGTTTTAGTTGAGGAGCTGCCGGCTAACGTTGCAGATTTCCCGTAAAG
rJMFF044E24+ GAAGTTTTATAATGTTTTAGTTGAGGAGCTGCCGGCTAACGTTGCAGATCTCCTGTAATG
____________________________________________________________
consensus GAAGTTTTATAATGTTTTAGTTGAGGAGCTGCCGGCTAACGTTGCAGATTTCCTGTAATG
. : . : . : . : . : . :
rJMFF037K15+ NGGNTTTTGNTCNGG-AAAAAAAAAAGGTGAATGGGGTTCCTCCTTACATTAAGTAATTT
rJMFF043F20+ TGGTTTTTGCTCAGG-AAAAAAAAAAGGTGAATGGGGTTCCTCCTTACATTAAGTAATTT
rJMFF006J05+ TGGTTTTTGNTCAGG-AAAAAAAAAAGGTGAATGGGGTTCCTCCTTACATTAAGTAATTT
rJMFF025G08+ TGGNTTTTGNTCAGG-AAAAAAAAAAGGTGAATGGGGTTCCTCCTTACATTAAGTAATTT
rJMFF022C07+ NGGNTTTTGNTCAGG-AAAAAAAAAAGGTGAATGGGGTTCCTCCTTACATTAAGTAATTT
rJMFF050L24+ TGGTTTTTGCTCCGGAAAAAAAAAAAGGGGAATGGGGTTCCTCCTTCCCTTAAGTAATTT
rJMFF044E24+ TGGTTTTTGCTCAGG-AAAAAAAAAAGGTGAATGGGGTTCCTCCTTACATTAAGTAATTT
____________________________________________________________
consensus TGGTTTTTGCTCAGG-AAAAAAAAAAGGTGAATGGGGTTCCTCCTTACATTAAGTAATTT
. : . : . : . : . : . :
rJMFF037K15+ TCGGTAGGTAATTTGGATGTGTAGTGAACTTGCAATTGGGAAAGACGATGGTAGGTTGGT
rJMFF043F20+ TCGGTAGGTAATTTGGATGTGTAGTGAACTTGCAATTGGGAAAGACGATGGTAGGTTGGT
rJMFF006J05+ TCGGTAGGTAATTTGGATGTGTAGTGAACTTGCAATTGGGAAAGACGATGGTAGGTTGGT
rJMFF025G08+ TCGGTAGGTAATTTGGATGTGTAGTGAACTTGCAATTGGGAAAGACGATGGTAGGTTGGT
rJMFF022C07+ TCGGTAGGTAATTTGGATGTGTAGTGAACTTGCAATTGCGAAAGACGATGGTAGGTTGGT
rJMFF050L24+ TCGGTAGGTAATTTGGAGGTGTAGGGAACTTCCAATTGGGAAAGACGATGGTAGGTTGGT
rJMFF044E24+ TCGGTAGGTAATTTGGATGTGTAGTGAACTTGCAATTGGGAAAGACGATGGTAGGTTGGT
____________________________________________________________
consensus TCGGTAGGTAATTTGGATGTGTAGTGAACTTGCAATTGGGAAAGACGATGGTAGGTTGGT
. : . : . : . : . : . :
rJMFF037K15+ CCTGGAACTTGCAAAATTGGGGAATTGCAGTTTTTTTTTTCCCAGTTTGGTCATAGAGTT
rJMFF043F20+ CCTGGAACTTGCAAAATTGGGGAATTGCAGTTTTTTTTTTCCCAGTTTGGTCATAGAGTT
rJMFF006J05+ CCTGGAACTTGCAAAATTGGGGAATTGCAG-TTTTTTTTTCCCAGTTTGGTCATAGAGTT
rJMFF025G08+ CCTGGAACTTGCAAAATTGGGGAATTGCAG-TTTTTTTTTCCCAGTTTGGTCATAGAGTT
rJMFF022C07+ CCTGGAACTTGCAAAATTGGGGAATTGCAG-TTTTTTTTTCCCAGTTTGGTCATAGAGTT
rJMFF050L24+ CCTGGAACTTGCAAAATTGGGGAATTGCAG-TTTTTTTTTCCCAGTTTGGTCATAGAGTT
rJMFF044E24+ CCTGGAACTTGCAAAATTGGGGAATTGCAG-TTTTTTTTTCCCAGTTTGGTCATAGAGTT
____________________________________________________________
consensus CCTGGAACTTGCAAAATTGGGGAATTGCAG-TTTTTTTTTCCCAGTTTGGTCATAGAGTT
. : . : . : . : . : . :
rJMFF037K15+ TGAATCTGCTGTTGCAAATTTTGTTGGTTTTTGTCTTTTGTGCTTTTCTTAAATGTCCAA
rJMFF043F20+ TGAATCTGCTGTTGCAAATTTTGTTGGTTTTTGTCTTTTGTGCTTTTCTTAAATGTCCAA
rJMFF006J05+ TGAATCTGCTGTTGCAAATTTTGTTGGTTTTTGTCTTTTGTGCTTTTCTTAAATGTCCAA
rJMFF025G08+ TGAATCTGCTGTTGCAAATTTTGTTGGTTTTTGTCTTTTGTGCTTTTCTTAAATGTCCAA
rJMFF022C07+ TGAATCTGCTGTTGCAAATTTTGTTGGTTTTTGTCTTTTGTGCTTTTCTTAAATGTCCAA
rJMFF050L24+ TGAATTTGCTGTTGCAAATTTTGTTGGTTTTTGTCTTTTGGGCTTTTCTTAAATGTCCAA
rJMFF044E24+ TGAATCTGCTGTTGCAAATTTTGTTGGTTTTTGTCTTTTGTGCTTTTCTTAAATGTCCAA
____________________________________________________________
consensus TGAATCTGCTGTTGCAAATTTTGTTGGTTTTTGTCTTTTGTGCTTTTCTTAAATGTCCAA
. : . : . : . : . : . :
rJMFF037K15+ AACAACTGCAGTACTGAATGTTGTTTAAATTAA
rJMFF043F20+ AACAACTGCAGTACTGAATGTTGTTTAAATTAATGACTTCATT
rJMFF006J05+ AACAACTGCAGTACTGAATGTTGTTTAAATTA
rJMFF025G08+ AACAACTGCAGTACTGAATGTTGTTTAAATTAA
rJMFF022C07+ AACAACTGCAGTACTGAATGTTGTTTAAATTAATGACTTCATT
rJMFF050L24+ AACAACTGCAGTACTGAATGTTGTTTAAATTAAAGACTTC
rJMFF044E24+ AACAACTGCAGTACTGAATGTTGTTTAAATTAATGACTTCATTGGTTTTTTAAAAAAAAG
____________________________________________________________
consensus AACAACTGCAGTACTGAATGTTGTTTAAATTAATGACTTCATTGGTTTTTTAAAAAAAAG